| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025645
Identifier: 189025645
GI number: 189025645
Start: 439723
End: 440028
Strand: Reverse
Name: 189025645
Synonym: TPASS_0412
Alternate gene names: NA
Gene position: 440028-439723 (Counterclockwise)
Preceding gene: 189025646
Following gene: 189025638
Centisome position: 38.62
GC content: 47.39
Gene sequence:
>306_bases ATGGGGATACGCGGTGAGCTGTTTACTACAGAGGTGCAAGCGGAAAATCGGACCTACTTTTTCAATGTGAAGGAAAATAG GGTCGGAGATGTATTTCTGCAGGTAGTAGAAAGCAAAAACGTCGACGGTGCCGGGTTTGACCGGCACGCGGTTGTGGTGT TTGAAGAAGAGATGCAGAAATTTCTGCAAGGTTTTAACAGGTCACTTGACTTTCTGGAAAAGAACAAAAAAGAACGGCTC CACCTTAGGCAAGCGCGCAGCCTGCACACCCGCGGGGAAAGAAAAACGATTGTAAGGAAGAAATAG
Upstream 100 bases:
>100_bases AGCTGCGCTTTTGCAGCTGCACGCGGACATGGTGCGCGAGGCAGATCGCTGTGCGCTTTCGTGTGCGGATACGACTTCAT AAGCAGAAGGAAGGTACAGC
Downstream 100 bases:
>100_bases CAAAGTCGGCAGCGCCGAGTCCCCTCTCTTCCCTCTCTCCTTTCCTTTCCTACACACAGCCGCGCGTGCGGGGTTTCAGA GTCCGAGCAGCTGACCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MGIRGELFTTEVQAENRTYFFNVKENRVGDVFLQVVESKNVDGAGFDRHAVVVFEEEMQKFLQGFNRSLDFLEKNKKERL HLRQARSLHTRGERKTIVRKK
Sequences:
>Translated_101_residues MGIRGELFTTEVQAENRTYFFNVKENRVGDVFLQVVESKNVDGAGFDRHAVVVFEEEMQKFLQGFNRSLDFLEKNKKERL HLRQARSLHTRGERKTIVRKK >Mature_100_residues GIRGELFTTEVQAENRTYFFNVKENRVGDVFLQVVESKNVDGAGFDRHAVVVFEEEMQKFLQGFNRSLDFLEKNKKERLH LRQARSLHTRGERKTIVRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11930; Mature: 11799
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRGELFTTEVQAENRTYFFNVKENRVGDVFLQVVESKNVDGAGFDRHAVVVFEEEMQK CCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH FLQGFNRSLDFLEKNKKERLHLRQARSLHTRGERKTIVRKK HHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GIRGELFTTEVQAENRTYFFNVKENRVGDVFLQVVESKNVDGAGFDRHAVVVFEEEMQK CCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH FLQGFNRSLDFLEKNKKERLHLRQARSLHTRGERKTIVRKK HHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA