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The map label for this gene is flgC [H]

Identifier: 189025630

GI number: 189025630

Start: 423508

End: 423897

Strand: Direct

Name: flgC [H]

Synonym: TPASS_0397

Alternate gene names: 189025630

Gene position: 423508-423897 (Clockwise)

Preceding gene: 189025629

Following gene: 189025631

Centisome position: 37.17

GC content: 50.77

Gene sequence:

>390_bases
GTGATCTCTGACAACATTGCTAATGCTTCCTCCACGAGGACTCAAGAAGGTGGAGTGTTTCGGAGGAGCAGGGTAGTTTT
GGCGCAGAAGAATCCTGGCATTGACTGGCGTATACCTTTTGTGCCCGAGCAGTTGGATCGGGGGGTAGGCACAGGGGTTC
GTGTGGTAAGCATAGAAAAGGACAACGCTCCTTCTCGTCTTGTGTACGACCCAACGCACCCTGATGCGATTCTATCAGGG
CCGAAGGCTGGGTACGTGGAGTATCCTAACGTGGATATTGTGACAGAGATGGTGGATCTTATTTCTGCCTCTCGCGCGTA
TGAGGCAAACATATCAGTTATTTCAGGATCAAAAGAAATGTTTCAGCGTGCGTTGGAGATTGCGCGCTAG

Upstream 100 bases:

>100_bases
GTCCGTGTTACGTTAAGCGTATGGAGAAGCGTGATGGGTTTGTTTAGTGGTATCAATATTGCCGCGACGGGTATGAGCGC
GCAGCGCTTGGCGGGCCGAT

Downstream 100 bases:

>100_bases
GTGTGTTGCGCGTACAGTCTGTGAAGATGTCTGTGCTGTGTGAGGGGAGGATACAATGACGCCAGTTGGTACCATTACGA
ATAGTGCGAATGTATATAAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEKDNAPSRLVYDPTHPDAILSG
PKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEMFQRALEIAR

Sequences:

>Translated_129_residues
MISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEKDNAPSRLVYDPTHPDAILSG
PKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEMFQRALEIAR
>Mature_129_residues
MISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEKDNAPSRLVYDPTHPDAILSG
PKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEMFQRALEIAR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=128, Percent_Identity=35.9375, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14145; Mature: 14145

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEK
CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCHHHCCCCCCCEEEEEEEC
DNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEM
CCCCCEEEECCCCCCCEECCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHH
FQRALEIAR
HHHHHHHCC
>Mature Secondary Structure
MISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEK
CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCHHHCCCCCCCEEEEEEEC
DNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEM
CCCCCEEEECCCCCCCEECCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHH
FQRALEIAR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]