Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025602

Identifier: 189025602

GI number: 189025602

Start: 393951

End: 395501

Strand: Direct

Name: 189025602

Synonym: TPASS_0369

Alternate gene names: NA

Gene position: 393951-395501 (Clockwise)

Preceding gene: 189025601

Following gene: 189025604

Centisome position: 34.57

GC content: 59.06

Gene sequence:

>1551_bases
GTGAGTGTGTGGGTGGCGCTCGCCTTGCTGGGAATGTGTGTTTCGTGTACGCACGTGCCTCCGCCTCGTGCCCTCATCGT
TTCAAAGGAGCCGCCTCCAGCGTTGGATTCTGCGCCGCGCCCTGCGATTCCAGAAGCAGTTCCTCTTCCGTCCCCTGTGG
AGGAAGAAATCGCCGGTCGCCTCCCTCCTGCACCTGCCGCTGCACCTGAGCGCGTTCCTGAGTCCTCACAGGAGCGGGAA
CAGAAACCTGAGTCTTCGAAGCCTCAGGTGGTAGAGCCGGTGTCGCTTGCCTCTCCGGTGAAGCCTCGCGAGGCTGGGAG
TGTACCTGATGTTCTTCCAGTACCTGAAGTGTCGTCGCCGCACGTTGCGCCGCCGGCACCCCCTGCGCCGACAGCTCCCC
GGCCGCATCGTCCCTCCCCTCCGCCTGTATCGCCTTCTGCATCCAAACCAAAGCAGCGCGCTGTACCTCCTTCTCCGCCC
CCTGCATCAGAGCCTCCTCGTGAGGCGGAGGTGCAGGCTGAGCCTGAGCCGGCAGAGGATTCTCCACGCGCGATGGTGCC
TGAAGAACCGCCTGAGGATGAGGTGCCGCGCGTTTCGCGCGCGGTACAGCTTGCAGTGGGGCAAAAACTTGAGGTTTTGT
ATCCGGGCGAAGGTTGGGTGTACGTGGGCGAGCATACTGCGCAGCCTGGTTTGCGCTATCACCAGCGCAAGTTGGAGGAG
TCGCATTCGCTTTTTACCTTTAGTGCTGAGCGAGAGGGTGATTTTGTCTTAGCGTTCTCCTATTTTGATGTGTTTCGGGG
TGATTTTGTCTCCGACGCACTTGCGGTCAAGGTGGTACCGAAGCGGGAAGGGCTCGCGCGTGTGGTGCGTGCGCCTGAGT
ACCGGCGTACGGTGTCGTCTCCTCCTGATACTGTCGTTTCTGAGTTATCTCCTGCGGGAACGGGTACCGAGCGCAGAGCA
GAAGAGAGTGGAACTTCTGGTTCTCAGCGCGCCGCTGCCCATACTGGAGCGCCTGTCCGGCAGGATCAGACGGATACTGC
TGTTGCAGAGAAAGCTCAGCACGGTACGCCCCGTCCTGATGAAAAAAAAGATCGGGAACCCACCGTAGGAGGACGTGACC
CTGTGCCGTCGGATGCAGTAGCACAGGGTGTGTCGGAGCGGTACTCTCCGCGGAAGATTTCACCAGCGTCTCAACCTTCT
GCTCCCTCAGCTGCGCCTATTGAGGCGCATGTCCCGGCATCTGCTCACAAAGAGGGTCAAGAAAAACGCGATCACCTAGC
AGAAGCGCGCCAGTTTTGTGCACAGGGAAACGCGCGAGATGCCCTCGCTTCGCTCGGCGATTTCTTTGCGCAGTTCCCTT
CTCACGAACGAATGGACGAAGCGTGGTTCCTGCGTGGACAAGCCTATGAGATCAACGGCGCACAGAGAAACGTACGCCTC
GCGCTCGAAGCATACAAGACAATACTGGAACGCTTCCCCCACAGCCCATACTGGAAAAAGGCAGACGAACGCGCACGCTT
TATCAAAAACTTTTTTATTAAGATTTCTTAG

Upstream 100 bases:

>100_bases
AGGAGTGCCTCCGACAGCTTGAGTATCCGACGGAAAAGGCGGTGCAGGCATTAGAGCACGCAAACGAGAAACGTATACAG
CAGATGCTAGAGGCAGTACC

Downstream 100 bases:

>100_bases
CAGTCTCGCATCACAGGCAACAGGAATGCGATCATGTCGCCTCGACAACCACACCCGCGCGTGCGTCCTATTCGTCAAAG
TCTAGGTCATTGTCCTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MSVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGRLPPAPAAAPERVPESSQERE
QKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPP
PASEPPREAEVQAEPEPAEDSPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE
SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSSPPDTVVSELSPAGTGTERRA
EESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPDEKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPS
APSAAPIEAHVPASAHKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL
ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS

Sequences:

>Translated_516_residues
MSVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGRLPPAPAAAPERVPESSQERE
QKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPP
PASEPPREAEVQAEPEPAEDSPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE
SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSSPPDTVVSELSPAGTGTERRA
EESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPDEKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPS
APSAAPIEAHVPASAHKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL
ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS
>Mature_515_residues
SVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGRLPPAPAAAPERVPESSQEREQ
KPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPPP
ASEPPREAEVQAEPEPAEDSPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEES
HSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSSPPDTVVSELSPAGTGTERRAE
ESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPDEKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPSA
PSAAPIEAHVPASAHKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRLA
LEAYKTILERFPHSPYWKKADERARFIKNFFIKIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y369_TREPA (O83384)

Other databases:

- EMBL:   AE000520
- PIR:   H71332
- RefSeq:   NP_218809.1
- ProteinModelPortal:   O83384
- GeneID:   2611636
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0369
- NMPDR:   fig|243276.1.peg.368
- TIGR:   TP_0369
- HOGENOM:   HBG731984
- OMA:   PSEVESP
- ProtClustDB:   CLSK491130
- BioCyc:   TPAL243276:TP_0369-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55860; Mature: 55729

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGR
CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
LPPAPAAAPERVPESSQEREQKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSP
CCCCCCCCHHHCCCCHHHHHHCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC
HVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPPPASEPPREAEVQAEPEPAED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHH
SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSS
HCCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCHHHHHCCC
PPDTVVSELSPAGTGTERRAEESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPD
CHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
EKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPSAPSAAPIEAHVPASAHKEGQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH
EKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEECCCEEEECCCCCHHHH
ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVWVALALLGMCVSCTHVPPPRALIVSKEPPPALDSAPRPAIPEAVPLPSPVEEEIAGR
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
LPPAPAAAPERVPESSQEREQKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEVSSP
CCCCCCCCHHHCCCCHHHHHHCCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC
HVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPPPASEPPREAEVQAEPEPAED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPRAMVPEEPPEDEVPRVSRAVQLAVGQKLEVLYPGEGWVYVGEHTAQPGLRYHQRKLEE
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHH
SHSLFTFSAEREGDFVLAFSYFDVFRGDFVSDALAVKVVPKREGLARVVRAPEYRRTVSS
HCCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCHHHHHCCC
PPDTVVSELSPAGTGTERRAEESGTSGSQRAAAHTGAPVRQDQTDTAVAEKAQHGTPRPD
CHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
EKKDREPTVGGRDPVPSDAVAQGVSERYSPRKISPASQPSAPSAAPIEAHVPASAHKEGQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH
EKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQRNVRL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHEECCCEEEECCCCCHHHH
ALEAYKTILERFPHSPYWKKADERARFIKNFFIKIS
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876