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The map label for this gene is tmpC [H]

Identifier: 189025552

GI number: 189025552

Start: 336003

End: 337064

Strand: Direct

Name: tmpC [H]

Synonym: TPASS_0319

Alternate gene names: 189025552

Gene position: 336003-337064 (Clockwise)

Preceding gene: 189025547

Following gene: 189025553

Centisome position: 29.49

GC content: 54.43

Gene sequence:

>1062_bases
GTGAGAGAGAAGTGGGTACGCGCGTTTGCGGGCGTTTTTTGCGCCATGCTGCTCATCGGCTGCTCTAAGAGCGACAGGCC
GCAGATGGGAAACGCAGGGGGCGCAGAAGGTGGTGACTTCGTCGTTGGAATGGTAACCGATTCAGGGGACATCGATGACA
AGTCCTTTAACCAGCAGGTGTGGGAAGGTATTTCGCGCTTCGCACAGGAGAACAACGCGAAGTGCAAGTATGTGACTGCT
CGCACTGACGCTGAGTACGTGCCTAGTTTGTCTGCGTTTGCAGATGAGAATATGGGGCTCGTGGTAGCATGCGGCTCTTT
CCTTGTGGAGGCGGTCATCGAGACTTCTGCTCGTTTTCCTAAGCAGAAGTTCCTGGTCATCGATGCGGTTGTCCAAGACC
GGGATAACGTTGTTTCTGCAGTGTTTGGTCAGAATGAGGGGTCGTTCCTTGTCGGCGTTGCAGCGGCGCTGAAGGCGAAA
GAGGCGGGAAAAAGCGCCGTCGGTTTCATCGTTGGCATGGAGCTGGGTATGATGCCTCTCTTTGAAGCGGGTTTTGAAGC
GGGGGTTAAGGCCGTCGATCCCGACATACAGGTAGTGGTTGAGGTTGCCAATACCTTTTCAGATCCCCAAAAGGGGCAGG
CGCTCGCGGCAAAGCTGTACGACTCGGGCGTGAATGTCATTTTTCAAGTAGCGGGGGGCACAGGAAACGGCGTTATCAAA
GAGGCGCGCGATCGTCGTCTCAATGGTCAGGACGTGTGGGTTATTGGCGTAGATCGTGACCAGTACATGGATGGGGTGTA
CGATGGGTCGAAGTCTGTGGTGCTTACCTCCATGGTCAAGCGTGCGGATGTCGCTGCGGAGCGGATCTCAAAGATGGCGT
ACGATGGCTCTTTTCCCGGGGGGCAGTCCATTATGTTCGGGCTTGAAGACAAGGCAGTGGGGATTCCTGAGGAAAATCCC
AATTTGAGCAGTGCGGTTATGGAGAAAATTCGGAGTTTTGAGGAGAAGATTGTCTCGAAGGAGATAGTGGTTCCGGTGCG
ATCTGCACGCATGATGAACTAA

Upstream 100 bases:

>100_bases
CACGCAAAAACTCACCACTCCTTGCACCTCCTTGTCCCCTTGGGTTACACTGTGACCCCTTATTTTGCGCATGTTTGTCG
ATAAAGGGGGGAGGATTCTT

Downstream 100 bases:

>100_bases
GGGGGAGAGGTGCCTCCCGTGCCTGCGCGCGGGAGGCCTTCTTCTTCATCTGATTTTTGTTTGTACGGCATGGCCGTCGT
GAATGGCTTCTGTGTGCAGG

Product: membrane lipoprotein TmpC

Products: NA

Alternate protein names: Membrane protein C; 35 kDa antigen; Lipoprotein TpN35 [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MREKWVRAFAGVFCAMLLIGCSKSDRPQMGNAGGAEGGDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTA
RTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAK
EAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIK
EARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEENP
NLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN

Sequences:

>Translated_353_residues
MREKWVRAFAGVFCAMLLIGCSKSDRPQMGNAGGAEGGDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTA
RTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAK
EAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIK
EARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEENP
NLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN
>Mature_353_residues
MREKWVRAFAGVFCAMLLIGCSKSDRPQMGNAGGAEGGDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTA
RTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAK
EAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIK
EARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEENP
NLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 37839; Mature: 37839

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKWVRAFAGVFCAMLLIGCSKSDRPQMGNAGGAEGGDFVVGMVTDSGDIDDKSFNQQV
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
WEGISRFAQENNAKCKYVTARTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFP
HHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCC
KQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVGFIVGMELGMMPL
CHHEEEEHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCHHH
FEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIK
HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHH
EARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPG
HHHHCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GQSIMFGLEDKAVGIPEENPNLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCC
>Mature Secondary Structure
MREKWVRAFAGVFCAMLLIGCSKSDRPQMGNAGGAEGGDFVVGMVTDSGDIDDKSFNQQV
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
WEGISRFAQENNAKCKYVTARTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFP
HHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCC
KQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVGFIVGMELGMMPL
CHHEEEEHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCHHH
FEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIK
HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHH
EARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPG
HHHHCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GQSIMFGLEDKAVGIPEENPNLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1894360; 9665876 [H]