| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is pyrG
Identifier: 189025539
GI number: 189025539
Start: 322152
End: 323885
Strand: Direct
Name: pyrG
Synonym: TPASS_0305
Alternate gene names: 189025539
Gene position: 322152-323885 (Clockwise)
Preceding gene: 189025536
Following gene: 189025540
Centisome position: 28.27
GC content: 58.25
Gene sequence:
>1734_bases ATGGATCCGGCTTTTATCTTTATTACAGGCGGTGTAGTTTCCTCGCTGGGCAAGGGTATTGCCGCAGGTGCCATCGGACT TTTGCTTAAGAGCCGGGGTATATCCGTGGTGAATCAAAAGTTTGATCCCTACCTGAATGGGGATCCCGGTACCATGAATC CCTATCAGCACGGGGAGGTGTTTGTCACGCAAGATGGCGGCGAAACGGACCTGGATCTGGGCCATTACGAGCGCTTCACG GACGTGCCTTCAAGTAGATTCAATAGCACGACTGCGGGGAGCGTGTACCGGGCTATTTTGGACCGTGAACGCGCGGGAGG ATACGGAGGTGCTACCGTACAGGTTATTCCTCACGTTACGGATGAAATCCAGGCGCGAATTCGCGCCGCTGCTGCTACCA CGGGGGCTCGGGTGGTTATCACCGAAATCGGTGGTACCGTCGGTGACATAGAGTCGCTTCCGTTCATCGAGGCGATTCGT CAAATCAGGCGTGTTCTGGGGAAGGAGCGCTGTCTTTTTATTCATTTGGGTTTAGTTCCCTACTTACCCAGTTGTGGTGA AATGAAAACCAAGCCGCTACAGCACAGCGTAAAGGAGCTGCTAGGACTTGGTGTGCAGCCGGATGTCATCCTGTGCCGCA GCGAGCGTCACATCACGGATGCGGTGCGCGAAAAGCTGAGCCTTTTTTGCAATGTTGAGCGGCGTGCTATTGTCGAGAAC GTGACGGCTCGTTCTATCTATGAGGTGCCGCTCCTTTTGGAAGCAGAAGGGCTGGGAGCGCTCTTGTGTGAGCGTTTGCG TCTTTTTGATACCTGCTGCGGGGGGCAGGTGGCGCGTAATCTCGGTGCAGGAGGCGCGCAGTCGGCTGTGTTGGGAGCGG GGGGGACGGTCCGTACAGACGGTGGTCTGCATCCTGCAGCAGGGCAGGGGGCAGAGCCAGATCTTACGGCGTGGCGCGCA ATGGTCCGTGCACTGTACTATCCGCGGCGGGAGCTTACGGTGGCGCTGGTGGGTAAGTATGTGTCGCTTGCGGACGCGTA TTTGAGCGTGAGCGAAGCGTTGACGGCGGCGGGTATTTGCCATCGTGCGCGAGTGGACATGCGCTGGATAGACGCAGAGG AAATCTGCAGCGTGCAGGACGCTGGGCACGCTCTTGCGGACGCAGATGCGCTGGTAATTCCAGGTGGCTTTGGCGTGCGG GGGATTGAAGGGATGATCTGTGCAGTTTCGCACGCGCGTGTGCAGAACCTGCCCTATCTTGGCATTTGCTTGGGGATGCA GATTGCAGTCATTGAATTTGCGCGCAATGTACTGTTGCTGGCAAGTGCACACTCTCGAGAATTTGCGGTAGACACCCCTC ACCCGGTTGTTGATCTTTTGCCCGGTTGTGTAGATACCCCAACGGGTGGAAGCCTGCGTCTGGGACAGTATCGCTGTCTG CTTGCGGAAGGTTCGCGCGCGCGTGCACTGTACGGTAGGGGGGAGGTCTGGGAGCGGCACCGGCACCGCTATGGGTTGAA CGCGGCGTATCGAGCGCGCTTTGAGGCGAGCGCGTTGCGTCCGGTGGGAGTGGATTCAGACTGTGGCGCAGTGGAGGTGG TGGAGCACGGGGAGCATCCGTGGTTTTTCGGCGTGCAGTTCCACCCGGAATTTTGTTCTCGACCGAACCGGGCTCACCCT TTGTTCCGGGCGCTGGTGGCGGCGGGCTTGGAGCGAAAAGACAGTCGTTCTTGA
Upstream 100 bases:
>100_bases TGTTCGATGCAAGCCGATGGGACAGTCCACCCTACAGGCGCAGGGGAGAGGCAGGGTGCTCCCTTTTAAAAAACGCATGG ACACGCTACACTCGTGCCGT
Downstream 100 bases:
>100_bases CGCGCGCAGGTATTTTTTCTAGACTCCTCTGTCCTTCTCAGCCGGTTGAAAGAGCTTTGTGTGGGCGTGCGGGTTTTGTT TGCGCGCGCTCCGATGCGGT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MDPAFIFITGGVVSSLGKGIAAGAIGLLLKSRGISVVNQKFDPYLNGDPGTMNPYQHGEVFVTQDGGETDLDLGHYERFT DVPSSRFNSTTAGSVYRAILDRERAGGYGGATVQVIPHVTDEIQARIRAAAATTGARVVITEIGGTVGDIESLPFIEAIR QIRRVLGKERCLFIHLGLVPYLPSCGEMKTKPLQHSVKELLGLGVQPDVILCRSERHITDAVREKLSLFCNVERRAIVEN VTARSIYEVPLLLEAEGLGALLCERLRLFDTCCGGQVARNLGAGGAQSAVLGAGGTVRTDGGLHPAAGQGAEPDLTAWRA MVRALYYPRRELTVALVGKYVSLADAYLSVSEALTAAGICHRARVDMRWIDAEEICSVQDAGHALADADALVIPGGFGVR GIEGMICAVSHARVQNLPYLGICLGMQIAVIEFARNVLLLASAHSREFAVDTPHPVVDLLPGCVDTPTGGSLRLGQYRCL LAEGSRARALYGRGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHPWFFGVQFHPEFCSRPNRAHP LFRALVAAGLERKDSRS
Sequences:
>Translated_577_residues MDPAFIFITGGVVSSLGKGIAAGAIGLLLKSRGISVVNQKFDPYLNGDPGTMNPYQHGEVFVTQDGGETDLDLGHYERFT DVPSSRFNSTTAGSVYRAILDRERAGGYGGATVQVIPHVTDEIQARIRAAAATTGARVVITEIGGTVGDIESLPFIEAIR QIRRVLGKERCLFIHLGLVPYLPSCGEMKTKPLQHSVKELLGLGVQPDVILCRSERHITDAVREKLSLFCNVERRAIVEN VTARSIYEVPLLLEAEGLGALLCERLRLFDTCCGGQVARNLGAGGAQSAVLGAGGTVRTDGGLHPAAGQGAEPDLTAWRA MVRALYYPRRELTVALVGKYVSLADAYLSVSEALTAAGICHRARVDMRWIDAEEICSVQDAGHALADADALVIPGGFGVR GIEGMICAVSHARVQNLPYLGICLGMQIAVIEFARNVLLLASAHSREFAVDTPHPVVDLLPGCVDTPTGGSLRLGQYRCL LAEGSRARALYGRGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHPWFFGVQFHPEFCSRPNRAHP LFRALVAAGLERKDSRS >Mature_577_residues MDPAFIFITGGVVSSLGKGIAAGAIGLLLKSRGISVVNQKFDPYLNGDPGTMNPYQHGEVFVTQDGGETDLDLGHYERFT DVPSSRFNSTTAGSVYRAILDRERAGGYGGATVQVIPHVTDEIQARIRAAAATTGARVVITEIGGTVGDIESLPFIEAIR QIRRVLGKERCLFIHLGLVPYLPSCGEMKTKPLQHSVKELLGLGVQPDVILCRSERHITDAVREKLSLFCNVERRAIVEN VTARSIYEVPLLLEAEGLGALLCERLRLFDTCCGGQVARNLGAGGAQSAVLGAGGTVRTDGGLHPAAGQGAEPDLTAWRA MVRALYYPRRELTVALVGKYVSLADAYLSVSEALTAAGICHRARVDMRWIDAEEICSVQDAGHALADADALVIPGGFGVR GIEGMICAVSHARVQNLPYLGICLGMQIAVIEFARNVLLLASAHSREFAVDTPHPVVDLLPGCVDTPTGGSLRLGQYRCL LAEGSRARALYGRGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHPWFFGVQFHPEFCSRPNRAHP LFRALVAAGLERKDSRS
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=586, Percent_Identity=40.9556313993174, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI28559085, Length=582, Percent_Identity=40.893470790378, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI28559083, Length=582, Percent_Identity=40.893470790378, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI221316689, Length=582, Percent_Identity=40.893470790378, Blast_Score=435, Evalue=1e-122, Organism=Escherichia coli, GI1789142, Length=582, Percent_Identity=45.1890034364261, Blast_Score=495, Evalue=1e-141, Organism=Caenorhabditis elegans, GI25148299, Length=637, Percent_Identity=35.0078492935636, Blast_Score=367, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319432, Length=585, Percent_Identity=38.2905982905983, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6322563, Length=587, Percent_Identity=38.8415672913118, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24664469, Length=584, Percent_Identity=40.2397260273973, Blast_Score=420, Evalue=1e-117, Organism=Drosophila melanogaster, GI21357815, Length=531, Percent_Identity=38.7947269303202, Blast_Score=356, Evalue=2e-98,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_TREPA (O83327)
Other databases:
- EMBL: AE000520 - PIR: C71342 - RefSeq: NP_218746.1 - ProteinModelPortal: O83327 - SMR: O83327 - IntAct: O83327 - MINT: MINT-6479806 - GeneID: 2610727 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0305 - NMPDR: fig|243276.1.peg.305 - TIGR: TP_0305 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: TPAL243276:TP_0305-MONOMER - BRENDA: 6.3.4.2 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 62148; Mature: 62148
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 423-423 ACT_SITE 548-548 ACT_SITE 550-550
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPAFIFITGGVVSSLGKGIAAGAIGLLLKSRGISVVNQKFDPYLNGDPGTMNPYQHGEV CCCEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCEE FVTQDGGETDLDLGHYERFTDVPSSRFNSTTAGSVYRAILDRERAGGYGGATVQVIPHVT EEECCCCCCCCCCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCH DEIQARIRAAAATTGARVVITEIGGTVGDIESLPFIEAIRQIRRVLGKERCLFIHLGLVP HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHH YLPSCGEMKTKPLQHSVKELLGLGVQPDVILCRSERHITDAVREKLSLFCNVERRAIVEN CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHH VTARSIYEVPLLLEAEGLGALLCERLRLFDTCCGGQVARNLGAGGAQSAVLGAGGTVRTD HHHHHHEECCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCEEECC GGLHPAAGQGAEPDLTAWRAMVRALYYPRRELTVALVGKYVSLADAYLSVSEALTAAGIC CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRARVDMRWIDAEEICSVQDAGHALADADALVIPGGFGVRGIEGMICAVSHARVQNLPYL HHHCCCEEECCHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCHHEEEHHHHHHHCCCEE GICLGMQIAVIEFARNVLLLASAHSREFAVDTPHPVVDLLPGCVDTPTGGSLRLGQYRCL EHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCHHHHHCCCCCCCCCCCCEEECCEEEE LAEGSRARALYGRGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHP EECCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHEECCCCC WFFGVQFHPEFCSRPNRAHPLFRALVAAGLERKDSRS EEEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDPAFIFITGGVVSSLGKGIAAGAIGLLLKSRGISVVNQKFDPYLNGDPGTMNPYQHGEV CCCEEEEEECHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCEE FVTQDGGETDLDLGHYERFTDVPSSRFNSTTAGSVYRAILDRERAGGYGGATVQVIPHVT EEECCCCCCCCCCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCH DEIQARIRAAAATTGARVVITEIGGTVGDIESLPFIEAIRQIRRVLGKERCLFIHLGLVP HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHH YLPSCGEMKTKPLQHSVKELLGLGVQPDVILCRSERHITDAVREKLSLFCNVERRAIVEN CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHH VTARSIYEVPLLLEAEGLGALLCERLRLFDTCCGGQVARNLGAGGAQSAVLGAGGTVRTD HHHHHHEECCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCEEECC GGLHPAAGQGAEPDLTAWRAMVRALYYPRRELTVALVGKYVSLADAYLSVSEALTAAGIC CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRARVDMRWIDAEEICSVQDAGHALADADALVIPGGFGVRGIEGMICAVSHARVQNLPYL HHHCCCEEECCHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCHHEEEHHHHHHHCCCEE GICLGMQIAVIEFARNVLLLASAHSREFAVDTPHPVVDLLPGCVDTPTGGSLRLGQYRCL EHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCHHHHHCCCCCCCCCCCCEEECCEEEE LAEGSRARALYGRGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHP EECCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHEECCCCC WFFGVQFHPEFCSRPNRAHPLFRALVAAGLERKDSRS EEEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876