| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is prs [H]
Identifier: 189025528
GI number: 189025528
Start: 308156
End: 309421
Strand: Direct
Name: prs [H]
Synonym: TPASS_0294
Alternate gene names: 189025528
Gene position: 308156-309421 (Clockwise)
Preceding gene: 189025527
Following gene: 189025529
Centisome position: 27.04
GC content: 47.31
Gene sequence:
>1266_bases ATGAGATGTTCAGGGTTTACTGATTTGGCGATCGTCGCCTGTCCTGGTGGCGAGCACTTCGCGGACGAAACTATCAAACA TTTGACGCGTGTGTGTGAACGCAAGTTTCACCAGAGAATGGACCGTTTGACGGACCGCTACGGTCTTGACTCGGGGTCGG TGATACGAGATGCGAACTTTTACCGGGACCTTTTTTCCACAGAGTTGTGTGCGCACGATGACGTACGTCGTTTTAATCCA CCGCATTTTAAGGTGGATGCACAGTTTATCTGTTTTCTAAATGGTGAGTTAAAAACGCAAATTAATGAATGTATTCGTGG CAAGGACGTTTTTATTTTCCAAGATGTAGAAAATCATCAACCAGTCCTGGTGAATAACGGAAAAAGTAAAAAAATATTCT CCGTGAATGATCACGTGATGATGCTCATTGTGACCATAGATGCAGTTCGGCACGCGGGAGCTGGGCGCGTTACCTTGGTT TTACCCACTTATCCGTATAGCCGTCAGCACAAAAAGTGTGGACGTGAGGGACTGACGGCGGGTTTGCTCGGGAGTGTATA TGAGTATCTTGGCGTGAGTCACATTGTCACTCTTGATTTGCATTCACGTGAGATTGAAAATGCCTTTCATCGCACGCGGC TTGAAAACTTACACGCCAGTTATCAGATTATCCGGGAGTTGGCAAAGATTGAAAATCTTTCTGACCCCGATATCCCTTTT GTAGTAGTGGCGCCGGACAGCGGGGCGGTTGAACGGAATAAATTTTATTCTTCTGGTTTAAAAAAGCCACTCGCGATGAT TTATAAGGTGCGTGATTATTCGGTGGTCGCGCAAAATGCAAAGCAGAGCAATATTGTAGAAATTAACTTGCTCGGCGATG TGGAGGGGAAGACGGCGTTTATTGCTGACGATATGCTTGGCAGCGGAGGTACGATGCTAAAGGCGATGGAATTTTTGAAA AGTCGCGGAGCAAAGCAGGTGATCGCGGCAGTGAGTTTACCTTTCTTTACGGGAAATGCACTTGAGTTATTTGATGAAGC GTACGAGAAACGGTATTTCTCTCGGATTATTGGCACAAATGCGGTGTTCCACACACAGCTTTCGCACAAGCAGTGGTATA CTGAAACCGATGTGTCAGGGTTGTTCGCGCGCGTCATCGCGCGCATTCATCATAATCAATCGTTGAGCAGTCTCTTGGAT GATCGCAGTATCATCGAGCGACTCCTACACGCTCGCTTGTCCGTTGCGGGGACACCGCGCGCATAG
Upstream 100 bases:
>100_bases TTGGGTGTGTTTCGTTGTATTAGCCTGCGCGGATGGGCTCCCTATCGTGCGGTTGAGACGGTGCTTGTCCAGTCCGCGTT GACAAGTGTGGAGAGATTGC
Downstream 100 bases:
>100_bases GGTAGCGTCGCAACGGACATGGGTTCGGGGATCTTTGTCGCGGACATCGGTACGTCTTCCCTAAAAGCGGCGATTATTTC CCAAGATGGAAAGGTGTTAC
Product: phosphoribosylpyrophosphate synthetase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MRCSGFTDLAIVACPGGEHFADETIKHLTRVCERKFHQRMDRLTDRYGLDSGSVIRDANFYRDLFSTELCAHDDVRRFNP PHFKVDAQFICFLNGELKTQINECIRGKDVFIFQDVENHQPVLVNNGKSKKIFSVNDHVMMLIVTIDAVRHAGAGRVTLV LPTYPYSRQHKKCGREGLTAGLLGSVYEYLGVSHIVTLDLHSREIENAFHRTRLENLHASYQIIRELAKIENLSDPDIPF VVVAPDSGAVERNKFYSSGLKKPLAMIYKVRDYSVVAQNAKQSNIVEINLLGDVEGKTAFIADDMLGSGGTMLKAMEFLK SRGAKQVIAAVSLPFFTGNALELFDEAYEKRYFSRIIGTNAVFHTQLSHKQWYTETDVSGLFARVIARIHHNQSLSSLLD DRSIIERLLHARLSVAGTPRA
Sequences:
>Translated_421_residues MRCSGFTDLAIVACPGGEHFADETIKHLTRVCERKFHQRMDRLTDRYGLDSGSVIRDANFYRDLFSTELCAHDDVRRFNP PHFKVDAQFICFLNGELKTQINECIRGKDVFIFQDVENHQPVLVNNGKSKKIFSVNDHVMMLIVTIDAVRHAGAGRVTLV LPTYPYSRQHKKCGREGLTAGLLGSVYEYLGVSHIVTLDLHSREIENAFHRTRLENLHASYQIIRELAKIENLSDPDIPF VVVAPDSGAVERNKFYSSGLKKPLAMIYKVRDYSVVAQNAKQSNIVEINLLGDVEGKTAFIADDMLGSGGTMLKAMEFLK SRGAKQVIAAVSLPFFTGNALELFDEAYEKRYFSRIIGTNAVFHTQLSHKQWYTETDVSGLFARVIARIHHNQSLSSLLD DRSIIERLLHARLSVAGTPRA >Mature_421_residues MRCSGFTDLAIVACPGGEHFADETIKHLTRVCERKFHQRMDRLTDRYGLDSGSVIRDANFYRDLFSTELCAHDDVRRFNP PHFKVDAQFICFLNGELKTQINECIRGKDVFIFQDVENHQPVLVNNGKSKKIFSVNDHVMMLIVTIDAVRHAGAGRVTLV LPTYPYSRQHKKCGREGLTAGLLGSVYEYLGVSHIVTLDLHSREIENAFHRTRLENLHASYQIIRELAKIENLSDPDIPF VVVAPDSGAVERNKFYSSGLKKPLAMIYKVRDYSVVAQNAKQSNIVEINLLGDVEGKTAFIADDMLGSGGTMLKAMEFLK SRGAKQVIAAVSLPFFTGNALELFDEAYEKRYFSRIIGTNAVFHTQLSHKQWYTETDVSGLFARVIARIHHNQSLSSLLD DRSIIERLLHARLSVAGTPRA
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=315, Percent_Identity=30.7936507936508, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=30.5466237942122, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI84875539, Length=318, Percent_Identity=30.5031446540881, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI28557709, Length=311, Percent_Identity=30.5466237942122, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI194018537, Length=337, Percent_Identity=28.1899109792285, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI4506133, Length=341, Percent_Identity=26.3929618768328, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1787458, Length=323, Percent_Identity=29.4117647058824, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17554704, Length=312, Percent_Identity=30.4487179487179, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25149168, Length=312, Percent_Identity=30.4487179487179, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17554702, Length=312, Percent_Identity=30.4487179487179, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71989924, Length=312, Percent_Identity=30.4487179487179, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17570245, Length=334, Percent_Identity=26.3473053892216, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321776, Length=306, Percent_Identity=29.7385620915033, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6320946, Length=309, Percent_Identity=31.0679611650485, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6319403, Length=310, Percent_Identity=30.9677419354839, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6322667, Length=184, Percent_Identity=30.4347826086957, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355239, Length=314, Percent_Identity=30.2547770700637, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI45551540, Length=337, Percent_Identity=28.1899109792285, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI281362873, Length=342, Percent_Identity=26.3157894736842, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24651454, Length=342, Percent_Identity=26.3157894736842, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24651458, Length=342, Percent_Identity=26.3157894736842, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24651456, Length=342, Percent_Identity=26.3157894736842, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI45552010, Length=176, Percent_Identity=28.4090909090909, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24651462, Length=176, Percent_Identity=28.4090909090909, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24651464, Length=176, Percent_Identity=28.4090909090909, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 47432; Mature: 47432
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCSGFTDLAIVACPGGEHFADETIKHLTRVCERKFHQRMDRLTDRYGLDSGSVIRDANF CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH YRDLFSTELCAHDDVRRFNPPHFKVDAQFICFLNGELKTQINECIRGKDVFIFQDVENHQ HHHHHHHHHHCCCCHHHCCCCCEEECCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCC PVLVNNGKSKKIFSVNDHVMMLIVTIDAVRHAGAGRVTLVLPTYPYSRQHKKCGREGLTA CEEEECCCCCEEEEECCCEEEEEEEHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCHH GLLGSVYEYLGVSHIVTLDLHSREIENAFHRTRLENLHASYQIIRELAKIENLSDPDIPF HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VVVAPDSGAVERNKFYSSGLKKPLAMIYKVRDYSVVAQNAKQSNIVEINLLGDVEGKTAF EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCCEEE IADDMLGSGGTMLKAMEFLKSRGAKQVIAAVSLPFFTGNALELFDEAYEKRYFSRIIGTN EEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC AVFHTQLSHKQWYTETDVSGLFARVIARIHHNQSLSSLLDDRSIIERLLHARLSVAGTPR CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC A C >Mature Secondary Structure MRCSGFTDLAIVACPGGEHFADETIKHLTRVCERKFHQRMDRLTDRYGLDSGSVIRDANF CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH YRDLFSTELCAHDDVRRFNPPHFKVDAQFICFLNGELKTQINECIRGKDVFIFQDVENHQ HHHHHHHHHHCCCCHHHCCCCCEEECCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCC PVLVNNGKSKKIFSVNDHVMMLIVTIDAVRHAGAGRVTLVLPTYPYSRQHKKCGREGLTA CEEEECCCCCEEEEECCCEEEEEEEHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCHH GLLGSVYEYLGVSHIVTLDLHSREIENAFHRTRLENLHASYQIIRELAKIENLSDPDIPF HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VVVAPDSGAVERNKFYSSGLKKPLAMIYKVRDYSVVAQNAKQSNIVEINLLGDVEGKTAF EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCCEEE IADDMLGSGGTMLKAMEFLKSRGAKQVIAAVSLPFFTGNALELFDEAYEKRYFSRIIGTN EEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC AVFHTQLSHKQWYTETDVSGLFARVIARIHHNQSLSSLLDDRSIIERLLHARLSVAGTPR CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]