Click here to switch to the map view.

The map label for this gene is 189025516

Identifier: 189025516

GI number: 189025516

Start: 298280

End: 298999

Strand: Direct

Name: 189025516

Synonym: TPASS_0282

Alternate gene names: NA

Gene position: 298280-298999 (Clockwise)

Preceding gene: 189025515

Following gene: 189025517

Centisome position: 26.18

GC content: 59.44

Gene sequence:

>720_bases
ATGCATGAGCAGCGGCGTGGGATAGTGCGGGTTGATCGGTTCTTGGAACTGCACCGGCGGTTGCTTGTGGGTGTGCTCGT
CGCTATCCTCGGGGGGCTAGGGCTAAGTGCAGGGTGTTTGCTGGTTATGACGCGTTTACGCGCGCGTGCTTCAGCAGAGG
TAACGCGCATAGCGCGTGAGTGGGACGTATTGCGTAAACCGGATAATACAGTGAGCGCTTCTGGTCATGAAGTGGAGGGG
CGGGGAGGGTCTTCCATACGTGCGAAGGAGGATGCGCTTTTGGCGCGCCTTGAGTCGTGCGCCAGTTCGCCGTGGCGGGA
CGGCTTTGCATATGCGTACGCACAGGCCTGTGTCGCGGACATTTTCTTTGCGCGTAAGGAGTGGGAGAAGGCACAGCAGG
CCTATGTCCGTGCAGCGTATGGTGCTCGTAGGAGCTACGTGGCCGGCGTGTATTATTTTAATGCAGCGTCTTGCGCGGAT
GAGCGTGGTCGCTTCGAGGAGGCGCGTGAGCTGTATCAGAGGAGTGCACGCGTGCAGGATTTTCCACTCGTTCCCCGTGC
TCTCTTTAACGTTGGTCGCATGGAAGAGGCGTTAGGGCGCGCGGCTGCTGCTACAGCTGCCTACATGCAGCTGTATGAGC
GCTTTCCGCTCAATGGATGGGCGGCGCTCGGGAAGTCGCGTGCTATTGCGATCTCAGTGGGTGGGGGAAGAGCACAGTAG

Upstream 100 bases:

>100_bases
GTGTGCTGTTCTTTCCCTTGGGCAGGTGTGGGGCTTCGCTGCTCGCGCCTGTCGGTGAGGGTTCTCGAGTTGAGTGATTC
TGTGAGGGGAGGAGGGATCC

Downstream 100 bases:

>100_bases
GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGTGTAGCTAGGAAGCGTAGAGAGCTCGCGTGAACACCGATTTTCC
GCGAGGAGTTGACGGAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MHEQRRGIVRVDRFLELHRRLLVGVLVAILGGLGLSAGCLLVMTRLRARASAEVTRIAREWDVLRKPDNTVSASGHEVEG
RGGSSIRAKEDALLARLESCASSPWRDGFAYAYAQACVADIFFARKEWEKAQQAYVRAAYGARRSYVAGVYYFNAASCAD
ERGRFEEARELYQRSARVQDFPLVPRALFNVGRMEEALGRAAAATAAYMQLYERFPLNGWAALGKSRAIAISVGGGRAQ

Sequences:

>Translated_239_residues
MHEQRRGIVRVDRFLELHRRLLVGVLVAILGGLGLSAGCLLVMTRLRARASAEVTRIAREWDVLRKPDNTVSASGHEVEG
RGGSSIRAKEDALLARLESCASSPWRDGFAYAYAQACVADIFFARKEWEKAQQAYVRAAYGARRSYVAGVYYFNAASCAD
ERGRFEEARELYQRSARVQDFPLVPRALFNVGRMEEALGRAAAATAAYMQLYERFPLNGWAALGKSRAIAISVGGGRAQ
>Mature_239_residues
MHEQRRGIVRVDRFLELHRRLLVGVLVAILGGLGLSAGCLLVMTRLRARASAEVTRIAREWDVLRKPDNTVSASGHEVEG
RGGSSIRAKEDALLARLESCASSPWRDGFAYAYAQACVADIFFARKEWEKAQQAYVRAAYGARRSYVAGVYYFNAASCAD
ERGRFEEARELYQRSARVQDFPLVPRALFNVGRMEEALGRAAAATAAYMQLYERFPLNGWAALGKSRAIAISVGGGRAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y282_TREPA (O83306)

Other databases:

- EMBL:   AE000520
- PIR:   E71343
- RefSeq:   NP_218723.1
- ProteinModelPortal:   O83306
- IntAct:   O83306
- GeneID:   2611663
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0282
- NMPDR:   fig|243276.1.peg.282
- TIGR:   TP_0282
- HOGENOM:   HBG250936
- OMA:   AGFRANT
- ProtClustDB:   CLSK218626
- BioCyc:   TPAL243276:TP_0282-MONOMER
- GO:   GO:0005488
- InterPro:   IPR013026
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26436; Mature: 26436

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x20affce0)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEQRRGIVRVDRFLELHRRLLVGVLVAILGGLGLSAGCLLVMTRLRARASAEVTRIARE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WDVLRKPDNTVSASGHEVEGRGGSSIRAKEDALLARLESCASSPWRDGFAYAYAQACVAD
HHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IFFARKEWEKAQQAYVRAAYGARRSYVAGVYYFNAASCADERGRFEEARELYQRSARVQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHCCHHHHHHHHHHHCCCCC
FPLVPRALFNVGRMEEALGRAAAATAAYMQLYERFPLNGWAALGKSRAIAISVGGGRAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCH
>Mature Secondary Structure
MHEQRRGIVRVDRFLELHRRLLVGVLVAILGGLGLSAGCLLVMTRLRARASAEVTRIARE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WDVLRKPDNTVSASGHEVEGRGGSSIRAKEDALLARLESCASSPWRDGFAYAYAQACVAD
HHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IFFARKEWEKAQQAYVRAAYGARRSYVAGVYYFNAASCADERGRFEEARELYQRSARVQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHCCHHHHHHHHHHHCCCCC
FPLVPRALFNVGRMEEALGRAAAATAAYMQLYERFPLNGWAALGKSRAIAISVGGGRAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876