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The map label for this gene is secY [H]

Identifier: 189025442

GI number: 189025442

Start: 214922

End: 216274

Strand: Direct

Name: secY [H]

Synonym: TPASS_0208

Alternate gene names: 189025442

Gene position: 214922-216274 (Clockwise)

Preceding gene: 189025441

Following gene: 189025443

Centisome position: 18.86

GC content: 49.08

Gene sequence:

>1353_bases
ATGAAACAGGGTGTTTTTGCAGCGGTGTTCCGGATAAGGGAGCTGCGTGCGCGTATCTTTTTCACGCTTAGCGTGTTGAC
GGTGTTTCGCTTTGGCTCGGTGCTGACAGTTCCGAGTGTGGACCCGCGTGCGCTTTCTGCTTATTTCCGATCTCAGGTTC
GGGGAAATGCTTTTGCAGACTACATGGATTTTTTTGTAGGCGGGGCGTTCTCGAATTTTTCAGTGTTTATGCTGGGAGTG
ATGCCGTACATTTCGACGCAGATTCTCATGCAGCTTTCGATGATTGTTTTTCCAAGTCTTAAGAAGGTTGTAGAAGATGT
AGGGGGGAGACGTCGCGTTCAGTTTTGGACACGTGTTGCAACGGTTTTTGTGTGTCTTATACAGTCTTCTGCGGTAACCG
TTTACGCAAATCAGATTCCCGGTGCCATTGTTATTCAGAGCTACGCCGTGCATCTGTTTGTCACCATGCTGACGGTGACC
TCAGGGAGTATGATCACGCTTTGGCTTGGGGAACAGATCACAGCGCGAGGCATTGGTAACGGTGTGTCAATGATTATTTT
TTCGGGTATTGTCGCGCGTTTGCCTCATGCGCTTGCAGAGATGTGGAGGCTGCAGCGTCTTGGCGAATTGAATATGGTGT
TTGTGATCGTTGCGTTTGTGATGTTTGTAGGAATTATTGTGCTGGTGGTGTATGAGCAGCAGGGGCAACGAAAAATACCA
ATTCATTATGCGCGGCGTGTGGTCGGGCGGAAAATGTACGGTGGTCAGAGCACGTATATCCCTTTTAAAATAAACCCTTC
GGGCGTAATTCCGATTATTTTTGCCTCATCTTTTTTGACATTTCCCCTGCAGATAGCCAGCAGTATTGGACCGAACGTGC
GCTTTCTGCATCAGCTTGCGCAGTTCTTACGACCGAACAGTTGGTGGTACAACGCGTTCTATGTAGTTTTGATTGTGTTT
TTTGCGTACTTCTACACGCAAGTCACCCTTAACCCGACTGAGATAGCAAAGCAGATTCGCGAGAACGGAGGTACGATTCC
GGGTATTCGTGCGGATAAGACGGAAGAATATCTACAAGGGATCTTGAACCGCCTGGTACTTCCCGGTTCGTTGTATCTTG
GGATGATCGCAGTGCTGCCCACCTTGATTCAAGCTGCGTTTGGGTTTCCGTCCTCTATTTCCTTACTGATGGGCGGTACT
TCTCTGTTGATTCTGGTAGGGGTGGATCTAGACACTATGAGTCAGATTGAGGCGCAGTTGAAAATGCGGCAGCGTGAGGG
GTTGGGAGGGCGTGGCAAAGTGCTACCGCGCATTTGTAGCGGGTACTTGCGAAAGGATGTATACGAGGAGTGA

Upstream 100 bases:

>100_bases
GTGGTGCGGGTGGACCGGGTTTCTGCTCGTGCACAGGAGAAGATTCAGCAGGCGGGCGGTTCAGTGGAGTGTATTGAAGC
GCAGGAACGATGAGCGGTAT

Downstream 100 bases:

>100_bases
GTTCATGAAGATAAGGACGAGCGTAAAGGTTATTTGTGATAAGTGTAAGCTTATTAAGCGTTTCGGTATTATCCGGGTGA
TTTGTGTGAATCCAAAGCAC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKQGVFAAVFRIRELRARIFFTLSVLTVFRFGSVLTVPSVDPRALSAYFRSQVRGNAFADYMDFFVGGAFSNFSVFMLGV
MPYISTQILMQLSMIVFPSLKKVVEDVGGRRRVQFWTRVATVFVCLIQSSAVTVYANQIPGAIVIQSYAVHLFVTMLTVT
SGSMITLWLGEQITARGIGNGVSMIIFSGIVARLPHALAEMWRLQRLGELNMVFVIVAFVMFVGIIVLVVYEQQGQRKIP
IHYARRVVGRKMYGGQSTYIPFKINPSGVIPIIFASSFLTFPLQIASSIGPNVRFLHQLAQFLRPNSWWYNAFYVVLIVF
FAYFYTQVTLNPTEIAKQIRENGGTIPGIRADKTEEYLQGILNRLVLPGSLYLGMIAVLPTLIQAAFGFPSSISLLMGGT
SLLILVGVDLDTMSQIEAQLKMRQREGLGGRGKVLPRICSGYLRKDVYEE

Sequences:

>Translated_450_residues
MKQGVFAAVFRIRELRARIFFTLSVLTVFRFGSVLTVPSVDPRALSAYFRSQVRGNAFADYMDFFVGGAFSNFSVFMLGV
MPYISTQILMQLSMIVFPSLKKVVEDVGGRRRVQFWTRVATVFVCLIQSSAVTVYANQIPGAIVIQSYAVHLFVTMLTVT
SGSMITLWLGEQITARGIGNGVSMIIFSGIVARLPHALAEMWRLQRLGELNMVFVIVAFVMFVGIIVLVVYEQQGQRKIP
IHYARRVVGRKMYGGQSTYIPFKINPSGVIPIIFASSFLTFPLQIASSIGPNVRFLHQLAQFLRPNSWWYNAFYVVLIVF
FAYFYTQVTLNPTEIAKQIRENGGTIPGIRADKTEEYLQGILNRLVLPGSLYLGMIAVLPTLIQAAFGFPSSISLLMGGT
SLLILVGVDLDTMSQIEAQLKMRQREGLGGRGKVLPRICSGYLRKDVYEE
>Mature_450_residues
MKQGVFAAVFRIRELRARIFFTLSVLTVFRFGSVLTVPSVDPRALSAYFRSQVRGNAFADYMDFFVGGAFSNFSVFMLGV
MPYISTQILMQLSMIVFPSLKKVVEDVGGRRRVQFWTRVATVFVCLIQSSAVTVYANQIPGAIVIQSYAVHLFVTMLTVT
SGSMITLWLGEQITARGIGNGVSMIIFSGIVARLPHALAEMWRLQRLGELNMVFVIVAFVMFVGIIVLVVYEQQGQRKIP
IHYARRVVGRKMYGGQSTYIPFKINPSGVIPIIFASSFLTFPLQIASSIGPNVRFLHQLAQFLRPNSWWYNAFYVVLIVF
FAYFYTQVTLNPTEIAKQIRENGGTIPGIRADKTEEYLQGILNRLVLPGSLYLGMIAVLPTLIQAAFGFPSSISLLMGGT
SLLILVGVDLDTMSQIEAQLKMRQREGLGGRGKVLPRICSGYLRKDVYEE

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=419, Percent_Identity=38.1861575178998, Blast_Score=257, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 50266; Mature: 50266

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]