Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025368

Identifier: 189025368

GI number: 189025368

Start: 155622

End: 156752

Strand: Reverse

Name: 189025368

Synonym: TPASS_0134

Alternate gene names: NA

Gene position: 156752-155622 (Counterclockwise)

Preceding gene: 189025369

Following gene: 189025367

Centisome position: 13.76

GC content: 57.29

Gene sequence:

>1131_bases
ATGTGCAAACCGCGCGTGTGGCGCATCGCCCACACCATCGTCCATGTAGGCGCGTTGCTGCTCGGCACCAGCCAGCTGAC
AACCTGTGATTTCTCCGGCATTTTTGCCACCATTCAGCAGGAAGTTGCCATTAAGTCGCCGTCTATTCCGGGGGCGATTT
ATGGCCTGGTCAAGGCCGGGGATAAGCTCTATGCCACCAACGGTCGGCTTTGGGAAAAGGAGCTGAACGGCATTAAGTGG
AAGCCGGTGCCTTTTCTTGACGGCCAAGATAAGCGAATTGATAGCCTTGCAGCCAGCAACACGTGCGTATTTGCCTGTGT
TTCAGGAGACGGTGTGTACAAATACACCGCCGGCACCACCTCTTCGCAGAAGGAGAGTAATACGGATAAAGCGCAGGCGG
TGGTACAGATGTCGGACGGAAAAGTGGTCCTGCAGTGTGCCTTGGGGGATGAAAAGACGACCCCGAGCGACGCAGACGAA
AGGTTGCTGGGGGGCGGCCAGGGCTACCTCGTCACATCCAAGGGATTTTACACCCTCCCAGGGTCAGCCTCCTGCGAGGT
TATCTCCGAAACAAAGGACGTCACCTGTAAGGCAGAGGCGCCGATCCTCGCCAGCGCCTGCGATGGCAGCAATACCTATA
TCCTTACCAAGGACAAGGTGTACTGCCGGTATACGAACGGCTCAGGGAGCACCCCCACTACGTGGTGCGACGTGGAACAC
AAGGTATCAGAGCCGCTTGCGCTTGCAGTGTTCAAAAATAAGGGTGAGACGTTCTTGCTCGTTGGGGGACAGCAGGGATA
CGGGGAAATAAAAATAGCCACGGCAAGCGGCAGCTCCTCTTCTTCCTCATGCGTTCCCCTCACGGCGGAAAACGTGCACG
CCACCACCGGGTGGGGCACCAACTGCTCCACCCCGGAAGGCAGCGCCGAGCAGTATCGTAGTACGATCGGCCGCTGGGCA
GTGAGCGGTATTTACGTAATCAAAAAAGACACTAGCGGTGGGCGGAAAAAGCGGAGCACCTCAACAGACTGCGAAAGACC
AGACCTCTACGTGGCGGTGGGGGATGCGAGCGACACCTACACCGGGCTCTGGAAGTTCGACACCGCTACGAATACCTGGA
ATCGCGAGTGA

Upstream 100 bases:

>100_bases
TTTTGCAGGAGGGTCGCGCCCCGCGCACCACCGCTGCATACCCAGTGCGCGCCTGTAACATTCTGACCGGGGAGGTGTTT
TCTCACACTGGGGAGGTTTT

Downstream 100 bases:

>100_bases
TGGCGCGCAGCAGATGCGTGCACCGCGTGGTGCACCAGGCAGCGTGCATCGGGGTGATAGGCCTGAGCACCAGCGCGCTG
ACCACGTGCGATTTCACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGDKLYATNGRLWEKELNGIKW
KPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTTSSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADE
RLLGGGQGYLVTSKGFYTLPGSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH
KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGTNCSTPEGSAEQYRSTIGRWA
VSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTYTGLWKFDTATNTWNRE

Sequences:

>Translated_376_residues
MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGDKLYATNGRLWEKELNGIKW
KPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTTSSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADE
RLLGGGQGYLVTSKGFYTLPGSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH
KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGTNCSTPEGSAEQYRSTIGRWA
VSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTYTGLWKFDTATNTWNRE
>Mature_376_residues
MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAGDKLYATNGRLWEKELNGIKW
KPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTTSSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADE
RLLGGGQGYLVTSKGFYTLPGSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH
KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGTNCSTPEGSAEQYRSTIGRWA
VSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTYTGLWKFDTATNTWNRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TP013X lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40131; Mature: 40131

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAG
CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEECCCCCCHHHHHHHHCC
DKLYATNGRLWEKELNGIKWKPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTT
CEEEECCCEEEHHHHCCCEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEECCCC
SSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADERLLGGGQGYLVTSKGFYTLP
CCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCEEECC
GSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH
CCCCEEEEECCCCEEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCEEECCCH
KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGT
HCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCC
NCSTPEGSAEQYRSTIGRWAVSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTY
CCCCCCCCHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCE
TGLWKFDTATNTWNRE
EEEEEECCCCCCCCCC
>Mature Secondary Structure
MCKPRVWRIAHTIVHVGALLLGTSQLTTCDFSGIFATIQQEVAIKSPSIPGAIYGLVKAG
CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHEECCCCCCHHHHHHHHCC
DKLYATNGRLWEKELNGIKWKPVPFLDGQDKRIDSLAASNTCVFACVSGDGVYKYTAGTT
CEEEECCCEEEHHHHCCCEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEECCCC
SSQKESNTDKAQAVVQMSDGKVVLQCALGDEKTTPSDADERLLGGGQGYLVTSKGFYTLP
CCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCEEECC
GSASCEVISETKDVTCKAEAPILASACDGSNTYILTKDKVYCRYTNGSGSTPTTWCDVEH
CCCCEEEEECCCCEEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCEEECCCH
KVSEPLALAVFKNKGETFLLVGGQQGYGEIKIATASGSSSSSSCVPLTAENVHATTGWGT
HCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEECCCCC
NCSTPEGSAEQYRSTIGRWAVSGIYVIKKDTSGGRKKRSTSTDCERPDLYVAVGDASDTY
CCCCCCCCHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCE
TGLWKFDTATNTWNRE
EEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]