Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025344

Identifier: 189025344

GI number: 189025344

Start: 125178

End: 126911

Strand: Direct

Name: 189025344

Synonym: TPASS_0110

Alternate gene names: NA

Gene position: 125178-126911 (Clockwise)

Preceding gene: 189025339

Following gene: 189025345

Centisome position: 10.99

GC content: 49.62

Gene sequence:

>1734_bases
GTGCGTGGCTATGGTGACGCTATGAACGAACAGCTCTCAACATTTGATAAATTGGTGGAAACGCTCTCCACTGAGGACGC
GCAGCGTATGCTTGCCGGTATCGGGAAAGCACTGCGTACTAGTGAAGCTAACGCGGAGACTCCCGCGAAAGTCAAGAAAA
AGCGCGCCTTTGCTCGCTGGGATACCAGAGAGGATAGCTTGGCGGGCGAAACCTTTTTTTTCCGCTTCTGGATTGGGGTA
AAGTCCTTTTTTCGGTCTTCGTCGGTGGAAGCGTTGTACGAGGAAACACTTCTCCAGCGTCTGGGCAATGATCTTAAGGC
GCATTACGCGCAGTACATTGACGTAAAGGAAAAAACCTTCACAAAGGTTTTTTACGACAAGATGGGCGAGTTGCGCAAAA
CACAGGTATTTTTTGATTCATTGCTCGCCTGCTACAATAGCGATAAGGGGGACTTCTACCTCCTGTTGAGCTCTTTTATC
ACTCCCGTTGTGTATGAGCAGCTGATGGCGTGCAGCGATCCGTTTGCTGCGCAGGGAGATGGTACTCCTTCTGGTTTGCG
TGCGTCCCTCCTTAAAAGAATGGACGTCGCCCTTGCCACCCTGAGTGGTCCTCATAAAACTGAGTTGTATCAGGCGGCGC
GCGCTATCGAGTGGATGAAGGTTTTTTGTGAAGTGCCTGTCGATCGTATTCTGCTGCGTTTTACCGTCATCTCCCCGGCG
AGTGCCGTGTGTCCCATTACTATTTTGCAATCTGAATTGGAAAAGCTTGCGTGTGTTATCCATGACAGCAAGCATATTCC
CGACGCGGTATTGCAGGGGCTTTTTGTGCTGAAGAGTAAAACATCGCTGCATGACGCGCAGGTGGATAACGCTGCGCACG
CTGCTGCCTTTCTTAAGGAGGCGAGTGCAGCGCTCGTTGTTATCAAGGATTTATCGCACAGCATTCCTATTGAGGATTTT
GTCCGTTTTGCAGGTAGGAACATTCGTTGGCAACCTCGGGCAATTGCCGGTGGTGAGGATTGGTTTGTCCTTTTTAAGAA
AGCGTGGAAAAAACGTTTCAATGAAAAATGGGCGCTGTGGTCTACCGCACAGAAGCGTTTAGTGCTTAAGGAGCAAATGC
TTTCTCTTCTCGGAAGGGAGCAGTTCTCAGAGTTGACTCATCGGCCATGGGAAGGGTTTTGGTATCAGCTTGTGTTTAGG
CGAGAGATGTCTTTTGTCTTTTTAAAAAATTTGTTCGAAGGTGCGTATGCGCGCGTCGTTTCACCGCCGCTGAACGTTAT
TCTTGCTGAGGGCAGTTTCTATCGTCGAGATGAGTTGATAGAGTACACTGACGCGGTAAATGTACTGGAGCAGATGGGAG
CAAAGATTAGGAATTTCGARGTAAGACTTTCGCCGGTGGGGGAATGGGGAGTCGCCTTTAGTGCCCAGCGTAAAGAGCAC
ACAGTTACCATGAAAAGTAAGGGTATTCTGGAAGCTCTGATAAAGGTAATTGACTCTGAGGCGACTGTCTTGCTTGATGC
AACCTTAAAGGCATTTCATTGCATTGGCGCTATGTTGGCGAGTATGATCGGGGCGTCGAAAACAAGTGCCTACGCAACGC
TTACCAATTGGTCTGATATCCGTGGGAGCGACAATGCTAGCTTCCGTGAGCAGGCTTCTCAGGCGAGAGCGTATGTGCAA
ACGGCGTCGCGTGCGCTAGTAGAAATGGAGAACCTAGAAACTACGCACCTGTGA

Upstream 100 bases:

>100_bases
CGCGTGTGGTCCCTTCGTCTATCGGTTAGGACATGAGATTCTCAATCTCAAAAGACGGGTTCAATTCCCGTAGGGACTAT
TGGGGTGTGTATTCCCCTGA

Downstream 100 bases:

>100_bases
GCGTTTCGCTCCTTTTCTGTATTCCTTTCGTGGGATTGGTTTGCAGGGCACGTGGTGATATGCAGCAGCTTGTTCAACAG
CAGCGGTTAGTTCTCAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MRGYGDAMNEQLSTFDKLVETLSTEDAQRMLAGIGKALRTSEANAETPAKVKKKRAFARWDTREDSLAGETFFFRFWIGV
KSFFRSSSVEALYEETLLQRLGNDLKAHYAQYIDVKEKTFTKVFYDKMGELRKTQVFFDSLLACYNSDKGDFYLLLSSFI
TPVVYEQLMACSDPFAAQGDGTPSGLRASLLKRMDVALATLSGPHKTELYQAARAIEWMKVFCEVPVDRILLRFTVISPA
SAVCPITILQSELEKLACVIHDSKHIPDAVLQGLFVLKSKTSLHDAQVDNAAHAAAFLKEASAALVVIKDLSHSIPIEDF
VRFAGRNIRWQPRAIAGGEDWFVLFKKAWKKRFNEKWALWSTAQKRLVLKEQMLSLLGREQFSELTHRPWEGFWYQLVFR
REMSFVFLKNLFEGAYARVVSPPLNVILAEGSFYRRDELIEYTDAVNVLEQMGAKIRNFEVRLSPVGEWGVAFSAQRKEH
TVTMKSKGILEALIKVIDSEATVLLDATLKAFHCIGAMLASMIGASKTSAYATLTNWSDIRGSDNASFREQASQARAYVQ
TASRALVEMENLETTHL

Sequences:

>Translated_577_residues
MRGYGDAMNEQLSTFDKLVETLSTEDAQRMLAGIGKALRTSEANAETPAKVKKKRAFARWDTREDSLAGETFFFRFWIGV
KSFFRSSSVEALYEETLLQRLGNDLKAHYAQYIDVKEKTFTKVFYDKMGELRKTQVFFDSLLACYNSDKGDFYLLLSSFI
TPVVYEQLMACSDPFAAQGDGTPSGLRASLLKRMDVALATLSGPHKTELYQAARAIEWMKVFCEVPVDRILLRFTVISPA
SAVCPITILQSELEKLACVIHDSKHIPDAVLQGLFVLKSKTSLHDAQVDNAAHAAAFLKEASAALVVIKDLSHSIPIEDF
VRFAGRNIRWQPRAIAGGEDWFVLFKKAWKKRFNEKWALWSTAQKRLVLKEQMLSLLGREQFSELTHRPWEGFWYQLVFR
REMSFVFLKNLFEGAYARVVSPPLNVILAEGSFYRRDELIEYTDAVNVLEQMGAKIRNFEVRLSPVGEWGVAFSAQRKEH
TVTMKSKGILEALIKVIDSEATVLLDATLKAFHCIGAMLASMIGASKTSAYATLTNWSDIRGSDNASFREQASQARAYVQ
TASRALVEMENLETTHL
>Mature_577_residues
MRGYGDAMNEQLSTFDKLVETLSTEDAQRMLAGIGKALRTSEANAETPAKVKKKRAFARWDTREDSLAGETFFFRFWIGV
KSFFRSSSVEALYEETLLQRLGNDLKAHYAQYIDVKEKTFTKVFYDKMGELRKTQVFFDSLLACYNSDKGDFYLLLSSFI
TPVVYEQLMACSDPFAAQGDGTPSGLRASLLKRMDVALATLSGPHKTELYQAARAIEWMKVFCEVPVDRILLRFTVISPA
SAVCPITILQSELEKLACVIHDSKHIPDAVLQGLFVLKSKTSLHDAQVDNAAHAAAFLKEASAALVVIKDLSHSIPIEDF
VRFAGRNIRWQPRAIAGGEDWFVLFKKAWKKRFNEKWALWSTAQKRLVLKEQMLSLLGREQFSELTHRPWEGFWYQLVFR
REMSFVFLKNLFEGAYARVVSPPLNVILAEGSFYRRDELIEYTDAVNVLEQMGAKIRNFEVRLSPVGEWGVAFSAQRKEH
TVTMKSKGILEALIKVIDSEATVLLDATLKAFHCIGAMLASMIGASKTSAYATLTNWSDIRGSDNASFREQASQARAYVQ
TASRALVEMENLETTHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y110_TREPA (O83148)

Other databases:

- EMBL:   AE000520
- PIR:   E71364
- RefSeq:   NP_218550.1
- ProteinModelPortal:   O83148
- IntAct:   O83148
- GeneID:   2610876
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0110
- NMPDR:   fig|243276.1.peg.109
- TIGR:   TP_0110
- HOGENOM:   HBG731901
- OMA:   SAGAYIN
- ProtClustDB:   CLSK218537
- BioCyc:   TPAL243276:TP_0110-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65151; Mature: 65151

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYGDAMNEQLSTFDKLVETLSTEDAQRMLAGIGKALRTSEANAETPAKVKKKRAFARW
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
DTREDSLAGETFFFRFWIGVKSFFRSSSVEALYEETLLQRLGNDLKAHYAQYIDVKEKTF
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TKVFYDKMGELRKTQVFFDSLLACYNSDKGDFYLLLSSFITPVVYEQLMACSDPFAAQGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
GTPSGLRASLLKRMDVALATLSGPHKTELYQAARAIEWMKVFCEVPVDRILLRFTVISPA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
SAVCPITILQSELEKLACVIHDSKHIPDAVLQGLFVLKSKTSLHDAQVDNAAHAAAFLKE
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHH
ASAALVVIKDLSHSIPIEDFVRFAGRNIRWQPRAIAGGEDWFVLFKKAWKKRFNEKWALW
CCHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHH
STAQKRLVLKEQMLSLLGREQFSELTHRPWEGFWYQLVFRREMSFVFLKNLFEGAYARVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPPLNVILAEGSFYRRDELIEYTDAVNVLEQMGAKIRNFEVRLSPVGEWGVAFSAQRKEH
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCEECCCCCC
TVTMKSKGILEALIKVIDSEATVLLDATLKAFHCIGAMLASMIGASKTSAYATLTNWSDI
EEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHC
RGSDNASFREQASQARAYVQTASRALVEMENLETTHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRGYGDAMNEQLSTFDKLVETLSTEDAQRMLAGIGKALRTSEANAETPAKVKKKRAFARW
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
DTREDSLAGETFFFRFWIGVKSFFRSSSVEALYEETLLQRLGNDLKAHYAQYIDVKEKTF
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TKVFYDKMGELRKTQVFFDSLLACYNSDKGDFYLLLSSFITPVVYEQLMACSDPFAAQGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
GTPSGLRASLLKRMDVALATLSGPHKTELYQAARAIEWMKVFCEVPVDRILLRFTVISPA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
SAVCPITILQSELEKLACVIHDSKHIPDAVLQGLFVLKSKTSLHDAQVDNAAHAAAFLKE
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHH
ASAALVVIKDLSHSIPIEDFVRFAGRNIRWQPRAIAGGEDWFVLFKKAWKKRFNEKWALW
CCHHEEEEECCCCCCCHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHH
STAQKRLVLKEQMLSLLGREQFSELTHRPWEGFWYQLVFRREMSFVFLKNLFEGAYARVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPPLNVILAEGSFYRRDELIEYTDAVNVLEQMGAKIRNFEVRLSPVGEWGVAFSAQRKEH
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCEECCCCCC
TVTMKSKGILEALIKVIDSEATVLLDATLKAFHCIGAMLASMIGASKTSAYATLTNWSDI
EEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHC
RGSDNASFREQASQARAYVQTASRALVEMENLETTHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876