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The map label for this gene is tpl

Identifier: 189025280

GI number: 189025280

Start: 55796

End: 56497

Strand: Reverse

Name: tpl

Synonym: TPASS_0046

Alternate gene names: 189025280

Gene position: 56497-55796 (Counterclockwise)

Preceding gene: 189025281

Following gene: 189025279

Centisome position: 4.96

GC content: 49.0

Gene sequence:

>702_bases
ATGATACCTAAACTGAGCCCAAATGCTGACCCCTGCACAGCGTGTGCTTCCACCCCTGCCTTTCCGCCGCAGCCCATGGA
GGAGGAAGGAGAGTTTTTATATCAGTTGCGTCTTGAGTACTCCCGCGAAGTGTTATATGCGCGTTTTCACGCGGCGCTAC
GCGTGCACACTTTTGTCGTGGTACCCACGCGTTATGGCAACGACATTGCTCGGTGCGTAGGGCGTATACGTACACCGGTA
CAAACCGATATCGCGAGTGTGGTACGTGTTGCATCAGACCAAGATTTGTGCACATGGCACATACATAGGGAAAAGGAACG
TGCTGCGGAAATGATTTTTCGGGATCGCATTGAGCACTATCAACTTGAGATGAAATGTATTTGCTGTCACTATCCTTTAG
AAGAAGCACGCGTGGTATTTCTATACAGTGCGCCAGCACGTGTTGATTTCAGAGAATTAGTTAGAGACTTAGGAGCTACA
TTTGGTACGAGAGTCGAACTGCGACAGATAAATGAACGGGAAGAAGCGCGGATAGTAGGCGGAATTGACTGCTGCGGGCG
CGCGCTATGTTGTTGCTCAGTGTTCAGCAGGTTGCGTCCAGTCTCGGTAAAAATGGTAAAGGAAAAAAATCTATTATTTC
GTTCAACCCAGATGATGGGTCGTTGCGGACGATTGCGCTGTTGTTTGACGTTTGAGGAATGA

Upstream 100 bases:

>100_bases
TCATGTCTCACCAGGTAGATCAACTCACGGTTTTACAGAAAACGGAGGAAATCTACGGTATGCTCGTGGACCTACTGATC
TAGCACTAAGGAAACTTATC

Downstream 100 bases:

>100_bases
TCGTTACACACGTAGCCTGTGTGGCGCACCTAAGTCGCTGCACCCACTCGTAACACCACACTCACATGTGCAGTGTGTTC
GCGTGTACAACCGATGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MIPKLSPNADPCTACASTPAFPPQPMEEEGEFLYQLRLEYSREVLYARFHAALRVHTFVVVPTRYGNDIARCVGRIRTPV
QTDIASVVRVASDQDLCTWHIHREKERAAEMIFRDRIEHYQLEMKCICCHYPLEEARVVFLYSAPARVDFRELVRDLGAT
FGTRVELRQINEREEARIVGGIDCCGRALCCCSVFSRLRPVSVKMVKEKNLLFRSTQMMGRCGRLRCCLTFEE

Sequences:

>Translated_233_residues
MIPKLSPNADPCTACASTPAFPPQPMEEEGEFLYQLRLEYSREVLYARFHAALRVHTFVVVPTRYGNDIARCVGRIRTPV
QTDIASVVRVASDQDLCTWHIHREKERAAEMIFRDRIEHYQLEMKCICCHYPLEEARVVFLYSAPARVDFRELVRDLGAT
FGTRVELRQINEREEARIVGGIDCCGRALCCCSVFSRLRPVSVKMVKEKNLLFRSTQMMGRCGRLRCCLTFEE
>Mature_233_residues
MIPKLSPNADPCTACASTPAFPPQPMEEEGEFLYQLRLEYSREVLYARFHAALRVHTFVVVPTRYGNDIARCVGRIRTPV
QTDIASVVRVASDQDLCTWHIHREKERAAEMIFRDRIEHYQLEMKCICCHYPLEEARVVFLYSAPARVDFRELVRDLGAT
FGTRVELRQINEREEARIVGGIDCCGRALCCCSVFSRLRPVSVKMVKEKNLLFRSTQMMGRCGRLRCCLTFEE

Specific function: Supposed to have signal peptidase II-like activity

COG id: COG1774

COG function: function code S; Uncharacterized homolog of PSP1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PSP1 C-terminal domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TPL_TREPA (P45685)

Other databases:

- EMBL:   U11881
- EMBL:   AE000520
- PIR:   H71371
- RefSeq:   NP_218486.1
- ProteinModelPortal:   P45685
- IntAct:   P45685
- MINT:   MINT-6478973
- GeneID:   2610798
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0046
- NMPDR:   fig|243276.1.peg.45
- TIGR:   TP_0046
- HOGENOM:   HBG634298
- OMA:   SIRMARD
- ProtClustDB:   CLSK2300120
- BioCyc:   TPAL243276:TP_0046-MONOMER
- InterPro:   IPR007557

Pfam domain/function: PF04468 PSP1

EC number: NA

Molecular weight: Translated: 26873; Mature: 26873

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS51411 PSP1_C

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKLSPNADPCTACASTPAFPPQPMEEEGEFLYQLRLEYSREVLYARFHAALRVHTFVV
CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
VPTRYGNDIARCVGRIRTPVQTDIASVVRVASDQDLCTWHIHREKERAAEMIFRDRIEHY
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
QLEMKCICCHYPLEEARVVFLYSAPARVDFRELVRDLGATFGTRVELRQINEREEARIVG
HHEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHEEC
GIDCCGRALCCCSVFSRLRPVSVKMVKEKNLLFRSTQMMGRCGRLRCCLTFEE
CHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MIPKLSPNADPCTACASTPAFPPQPMEEEGEFLYQLRLEYSREVLYARFHAALRVHTFVV
CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
VPTRYGNDIARCVGRIRTPVQTDIASVVRVASDQDLCTWHIHREKERAAEMIFRDRIEHY
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
QLEMKCICCHYPLEEARVVFLYSAPARVDFRELVRDLGATFGTRVELRQINEREEARIVG
HHEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHEEC
GIDCCGRALCCCSVFSRLRPVSVKMVKEKNLLFRSTQMMGRCGRLRCCLTFEE
CHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876