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The map label for this gene is 189025247

Identifier: 189025247

GI number: 189025247

Start: 12542

End: 13207

Strand: Direct

Name: 189025247

Synonym: TPASS_0013

Alternate gene names: NA

Gene position: 12542-13207 (Clockwise)

Preceding gene: 189025246

Following gene: 189025248

Centisome position: 1.1

GC content: 50.45

Gene sequence:

>666_bases
ATGAAAAGTCAGTTTCTATTGAAGGTATGGGTGGTATGTGTCGGTGCACTGTTGTGTCGCTGTGGGGGCGCGCGTGCTCC
ACAAAATACCGGGGGCACGAAAGCGGTGGAGGATTATCACATCGGGGTTATGACCGGTCCGGGTAGTCACTCTAGCCATG
ATGTAGTTGCGGCAAAAAGAGCATGCGCCATGTACGGTGCGGTAGGTGACGGTCACCGAGGATGTATCTTGCATGTCACG
TATCCTGAAGATTTTGTAAATCGGCAAGATGAAACGGTGTCCCGGCTCCTTGCATTTGCTGATGATCCTCTCATGGGTGC
TATTGTTGTCAGCGAAGGAATTCATGGAACTGCAGAGGCTTTTAACAAAATTAGGGCGAAGCGTTCCGACATCATGCTCT
TTGTAGGGGATCCGCATGAGTATCCTGAGCTTATCCAAAAATCTGCTGATATCGTGGTTAGTGATGATTATGCATTTGGT
GGGTATGCTATTCCCTGGGCTGCAAAGAAAATGGGCGCGCGTACGTTGGTGCACGTTTCTTTTCCTCGTCACCTTTCAAA
GGCTGAGCTTAGGACGAGGCGTCAGGTAATGGAGGCAGTGTGTGCAGATATCGGTATAGAGTTTGCGTCTGAGGAGGCTC
CAGATCCCGCAGGAGTCAGGTGTTGA

Upstream 100 bases:

>100_bases
TGCTGTATCATAAATACACAATTGATTTTCCCGTGGGGGGGTGGACCATACGCCTAAGCGTTTTGGAGAGATGGTGTGTG
CAGATCGTTAAGGGGAGACT

Downstream 100 bases:

>100_bases
AGGGGCGCGTGCGTTTATCGGCACACACACGAAGCAATGGATCGGTAAGTATGGGAAGAACACTATGTTCTTTTGCACTA
ATGATACGCACCGTGTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKSQFLLKVWVVCVGALLCRCGGARAPQNTGGTKAVEDYHIGVMTGPGSHSSHDVVAAKRACAMYGAVGDGHRGCILHVT
YPEDFVNRQDETVSRLLAFADDPLMGAIVVSEGIHGTAEAFNKIRAKRSDIMLFVGDPHEYPELIQKSADIVVSDDYAFG
GYAIPWAAKKMGARTLVHVSFPRHLSKAELRTRRQVMEAVCADIGIEFASEEAPDPAGVRC

Sequences:

>Translated_221_residues
MKSQFLLKVWVVCVGALLCRCGGARAPQNTGGTKAVEDYHIGVMTGPGSHSSHDVVAAKRACAMYGAVGDGHRGCILHVT
YPEDFVNRQDETVSRLLAFADDPLMGAIVVSEGIHGTAEAFNKIRAKRSDIMLFVGDPHEYPELIQKSADIVVSDDYAFG
GYAIPWAAKKMGARTLVHVSFPRHLSKAELRTRRQVMEAVCADIGIEFASEEAPDPAGVRC
>Mature_221_residues
MKSQFLLKVWVVCVGALLCRCGGARAPQNTGGTKAVEDYHIGVMTGPGSHSSHDVVAAKRACAMYGAVGDGHRGCILHVT
YPEDFVNRQDETVSRLLAFADDPLMGAIVVSEGIHGTAEAFNKIRAKRSDIMLFVGDPHEYPELIQKSADIVVSDDYAFG
GYAIPWAAKKMGARTLVHVSFPRHLSKAELRTRRQVMEAVCADIGIEFASEEAPDPAGVRC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y013_TREPA (O83057)

Other databases:

- EMBL:   AE000520
- PIR:   B71377
- RefSeq:   NP_218453.1
- ProteinModelPortal:   O83057
- IntAct:   O83057
- GeneID:   2610756
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0013
- NMPDR:   fig|243276.1.peg.12
- TIGR:   TP_0013
- HOGENOM:   HBG250904
- ProtClustDB:   CLSK900227
- BioCyc:   TPAL243276:TP_0013-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23873; Mature: 23873

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQFLLKVWVVCVGALLCRCGGARAPQNTGGTKAVEDYHIGVMTGPGSHSSHDVVAAKR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHH
ACAMYGAVGDGHRGCILHVTYPEDFVNRQDETVSRLLAFADDPLMGAIVVSEGIHGTAEA
HHHHHCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH
FNKIRAKRSDIMLFVGDPHEYPELIQKSADIVVSDDYAFGGYAIPWAAKKMGARTLVHVS
HHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEEECCCCCCCEECCHHHHHCCCEEEEEEE
FPRHLSKAELRTRRQVMEAVCADIGIEFASEEAPDPAGVRC
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSQFLLKVWVVCVGALLCRCGGARAPQNTGGTKAVEDYHIGVMTGPGSHSSHDVVAAKR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHH
ACAMYGAVGDGHRGCILHVTYPEDFVNRQDETVSRLLAFADDPLMGAIVVSEGIHGTAEA
HHHHHCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH
FNKIRAKRSDIMLFVGDPHEYPELIQKSADIVVSDDYAFGGYAIPWAAKKMGARTLVHVS
HHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEEECCCCCCCEECCHHHHHCCCEEEEEEE
FPRHLSKAELRTRRQVMEAVCADIGIEFASEEAPDPAGVRC
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876