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The map label for this gene is noc [H]

Identifier: 188587516

GI number: 188587516

Start: 3157842

End: 3158735

Strand: Reverse

Name: noc [H]

Synonym: Nther_2927

Alternate gene names: 188587516

Gene position: 3158735-3157842 (Counterclockwise)

Preceding gene: 188587517

Following gene: 188587515

Centisome position: 99.78

GC content: 35.35

Gene sequence:

>894_bases
TTGAAAGGTGGTGAACTTATTGTAATGAAAGAATCCTGGGCAAAGTTATTGGGAATTTCGAGTGGTGAGGAAGAGAGTGA
ACTTGAGGAAAACATCCAAGAAGTTCCCATGGAAGAAATTGATCCCAATCCGTACCAACCACGGAGAGAGTTTGACGAAG
AAAGATTACAAGAATTAATGCAGTCAATAAAAACATATGGGTTGCTACAACCAATTGTAGTTAGAAAAGTAGGAGAGCGT
TATCAAATTGTTGCTGGAGAACGTCGTTACATGGCATTACAAAGATTAAAAAGAGAAAAAGTTTCTGCTATCGTGAGAGA
ATTAAGAGATAGTGCTATGGCTGCCCTTGCTATGATTGAAAATATTCAAAGGGAGAATCTTAACTTTATCGAAGAAGCCG
AGGGCTATCAAAAGCTAATAAACGAATTCGGTTTGACCCAGGAAGTCCTTGCTCAAAGATTAGGTAGAAGTCAATCAACA
ATTGCAAATAAATTAAGATTGTTAAAGCTTTCAGAAAATGTAAAGAAAAAGTTGAGCACCTCTAATTTAACAGAGCGACA
TGCGCGTTCACTATTAAAACTTCCCAATGAAGAAATGCAGGTCGATTTATTAAACCAAATAGAATCGGAAAATTTAAATG
TTAAACAAACCGAAGAAAGAGTCAATATTATGCTTGATATTGAAGAAGATACGGATGATAATGGACAAGCCAAGTCAAAA
AAGAGAACTAAACGTCCAGTAATTAGAGATCTACGTATATTTTTAAACACCATAAGACAAGCGGTGGATGTAATCAAAGA
TTCGGGGCTGGAACCTGATGTTTCAGAAGATGATTATGATGATAGGATCGAAATAAAGATAGTTTTACCTAAAGATGCTA
ATAAACAAAAATAA

Upstream 100 bases:

>100_bases
TGTGGGAATACCGCAAAAGAGACCTCTAAGTTAACTTTTGTTTATACTTTTTTGGCAGGAATTTTTCCTTTAATAATAGA
AGGAAAATATTTGCTAGCTG

Downstream 100 bases:

>100_bases
TTTAAATTTATAACAGGCAACTTTTAAAATTGCCTGTTTTTTTCTTGTTTTTTTATGTATAATGTTTTATGAAGAACTTT
ATATTTAATAGCATATCTCG

Product: parB-like partition protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKGGELIVMKESWAKLLGISSGEEESELEENIQEVPMEEIDPNPYQPRREFDEERLQELMQSIKTYGLLQPIVVRKVGER
YQIVAGERRYMALQRLKREKVSAIVRELRDSAMAALAMIENIQRENLNFIEEAEGYQKLINEFGLTQEVLAQRLGRSQST
IANKLRLLKLSENVKKKLSTSNLTERHARSLLKLPNEEMQVDLLNQIESENLNVKQTEERVNIMLDIEEDTDDNGQAKSK
KRTKRPVIRDLRIFLNTIRQAVDVIKDSGLEPDVSEDDYDDRIEIKIVLPKDANKQK

Sequences:

>Translated_297_residues
MKGGELIVMKESWAKLLGISSGEEESELEENIQEVPMEEIDPNPYQPRREFDEERLQELMQSIKTYGLLQPIVVRKVGER
YQIVAGERRYMALQRLKREKVSAIVRELRDSAMAALAMIENIQRENLNFIEEAEGYQKLINEFGLTQEVLAQRLGRSQST
IANKLRLLKLSENVKKKLSTSNLTERHARSLLKLPNEEMQVDLLNQIESENLNVKQTEERVNIMLDIEEDTDDNGQAKSK
KRTKRPVIRDLRIFLNTIRQAVDVIKDSGLEPDVSEDDYDDRIEIKIVLPKDANKQK
>Mature_297_residues
MKGGELIVMKESWAKLLGISSGEEESELEENIQEVPMEEIDPNPYQPRREFDEERLQELMQSIKTYGLLQPIVVRKVGER
YQIVAGERRYMALQRLKREKVSAIVRELRDSAMAALAMIENIQRENLNFIEEAEGYQKLINEFGLTQEVLAQRLGRSQST
IANKLRLLKLSENVKKKLSTSNLTERHARSLLKLPNEEMQVDLLNQIESENLNVKQTEERVNIMLDIEEDTDDNGQAKSK
KRTKRPVIRDLRIFLNTIRQAVDVIKDSGLEPDVSEDDYDDRIEIKIVLPKDANKQK

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 34403; Mature: 34403

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGELIVMKESWAKLLGISSGEEESELEENIQEVPMEEIDPNPYQPRREFDEERLQELM
CCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHH
QSIKTYGLLQPIVVRKVGERYQIVAGERRYMALQRLKREKVSAIVRELRDSAMAALAMIE
HHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIQRENLNFIEEAEGYQKLINEFGLTQEVLAQRLGRSQSTIANKLRLLKLSENVKKKLST
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SNLTERHARSLLKLPNEEMQVDLLNQIESENLNVKQTEERVNIMLDIEEDTDDNGQAKSK
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCCCCHHHH
KRTKRPVIRDLRIFLNTIRQAVDVIKDSGLEPDVSEDDYDDRIEIKIVLPKDANKQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKGGELIVMKESWAKLLGISSGEEESELEENIQEVPMEEIDPNPYQPRREFDEERLQELM
CCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHH
QSIKTYGLLQPIVVRKVGERYQIVAGERRYMALQRLKREKVSAIVRELRDSAMAALAMIE
HHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIQRENLNFIEEAEGYQKLINEFGLTQEVLAQRLGRSQSTIANKLRLLKLSENVKKKLST
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SNLTERHARSLLKLPNEEMQVDLLNQIESENLNVKQTEERVNIMLDIEEDTDDNGQAKSK
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCCCCHHHH
KRTKRPVIRDLRIFLNTIRQAVDVIKDSGLEPDVSEDDYDDRIEIKIVLPKDANKQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA