Click here to switch to the map view.

The map label for this gene is 188587489

Identifier: 188587489

GI number: 188587489

Start: 3130774

End: 3131307

Strand: Reverse

Name: 188587489

Synonym: Nther_2899

Alternate gene names: NA

Gene position: 3131307-3130774 (Counterclockwise)

Preceding gene: 188587490

Following gene: 188587488

Centisome position: 98.92

GC content: 40.26

Gene sequence:

>534_bases
ATGCAGGTAAACGGAGAAGAACTAGAACAAAATGGGTTAAGAACAGCAGCTGAGTTAATTGCTATAGCAGCGCGGACAGC
TCCTAAGGGTAAGGGTGTGGATAACCTGGTCACCTCAGTTGTATCAGAAGAAAATTTGGAGCGTTTACGGGAACAAATGT
ACAATATTGCCGACAGAGAAGGGTCAATTGCCGATTTTTTTAAAAGAGATGCTGACAATCTTAAAAAAAGTCCTTATGTA
GTGCTTTTTGGCACTAAAGTAAGTAGACTAGATGTACATCCTTGTGGGTTTTGCGGATACAATAATTGTCAAGAGAATCA
TCGTGATAATGGAATCTGTGCGTTTAATCCCGGTGACTTGGGTATTGCTATTGGTTCGGCTGTTAGCAAAGCGGCTGACT
TGAGAGTGGACAATAGAGTCATGTTTACTGTGGGTAAAGCAGCTCTAGAGCTCAAACTTTTAGGTGATGATGTAAAAATA
GCCTATGGATTACCTTTATTTTCAGGTGGGAAGAGTATTTACTTTGACAGATAA

Upstream 100 bases:

>100_bases
GGAAGCGGTTCCTGTTTGGAGAATTGAATTTGATACCAGAGAAGTTTATTATATAAATGCGTTTACAGGTGAAATAGAAC
GGGAAGGGGTGTATTGACAG

Downstream 100 bases:

>100_bases
TTTGTACCTGATATTCCAAAATAATAATCAACAAGAGAGGGTTGAACTATGAGATTATTATTAATTCGCCATGGTGAATC
AACAGGAAACTTTGAAGAAC

Product: conserved ferredoxin domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MQVNGEELEQNGLRTAAELIAIAARTAPKGKGVDNLVTSVVSEENLERLREQMYNIADREGSIADFFKRDADNLKKSPYV
VLFGTKVSRLDVHPCGFCGYNNCQENHRDNGICAFNPGDLGIAIGSAVSKAADLRVDNRVMFTVGKAALELKLLGDDVKI
AYGLPLFSGGKSIYFDR

Sequences:

>Translated_177_residues
MQVNGEELEQNGLRTAAELIAIAARTAPKGKGVDNLVTSVVSEENLERLREQMYNIADREGSIADFFKRDADNLKKSPYV
VLFGTKVSRLDVHPCGFCGYNNCQENHRDNGICAFNPGDLGIAIGSAVSKAADLRVDNRVMFTVGKAALELKLLGDDVKI
AYGLPLFSGGKSIYFDR
>Mature_177_residues
MQVNGEELEQNGLRTAAELIAIAARTAPKGKGVDNLVTSVVSEENLERLREQMYNIADREGSIADFFKRDADNLKKSPYV
VLFGTKVSRLDVHPCGFCGYNNCQENHRDNGICAFNPGDLGIAIGSAVSKAADLRVDNRVMFTVGKAALELKLLGDDVKI
AYGLPLFSGGKSIYFDR

Specific function: Unknown

COG id: COG4739

COG function: function code S; Uncharacterized protein containing a ferredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019224 [H]

Pfam domain/function: PF09918 DUF2148 [H]

EC number: NA

Molecular weight: Translated: 19301; Mature: 19301

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNGEELEQNGLRTAAELIAIAARTAPKGKGVDNLVTSVVSEENLERLREQMYNIADRE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSIADFFKRDADNLKKSPYVVLFGTKVSRLDVHPCGFCGYNNCQENHRDNGICAFNPGDL
CCHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCHHHCCCCCEEEECCCCC
GIAIGSAVSKAADLRVDNRVMFTVGKAALELKLLGDDVKIAYGLPLFSGGKSIYFDR
EEEHHHHHHHHHHCEECCEEEEEECCEEEEEEEECCCEEEEECCEEECCCCEEEECC
>Mature Secondary Structure
MQVNGEELEQNGLRTAAELIAIAARTAPKGKGVDNLVTSVVSEENLERLREQMYNIADRE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSIADFFKRDADNLKKSPYVVLFGTKVSRLDVHPCGFCGYNNCQENHRDNGICAFNPGDL
CCHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCHHHCCCCCEEEECCCCC
GIAIGSAVSKAADLRVDNRVMFTVGKAALELKLLGDDVKIAYGLPLFSGGKSIYFDR
EEEHHHHHHHHHHCEECCEEEEEECCEEEEEEEECCCEEEEECCEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]