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The map label for this gene is atpC

Identifier: 188587433

GI number: 188587433

Start: 3077033

End: 3077458

Strand: Reverse

Name: atpC

Synonym: Nther_2843

Alternate gene names: 188587433

Gene position: 3077458-3077033 (Counterclockwise)

Preceding gene: 188587434

Following gene: 188587432

Centisome position: 97.22

GC content: 43.43

Gene sequence:

>426_bases
ATGGCTAGAAAGGAATTTCAATTGGAGATAGTCACCCCAGAACGAATTGTGTATTCTGATAAAGTGGTGTCTATCACTGC
CCAGGCGGAAGATGGTCGTTTAGGCATTTTACACGATCATCGCCCCCTAGTTACGAAATTGCAAATTGCCCCTTTTAGCT
TTATCACGCAAGAAGGTCAAGAGGAAAATGTTGCTATCAGTGGTTCTGGCTATTTGGAAGTAACTCCGCAAAAAGTGACT
GTATTATGCCAGACAGCTGAATTATCCCATGAAATCGAATTGGAGAGAGCCCAAGAAGCTAAAGAACGTGCTGAAGAGAG
ATTACAAGCAAGTGATGAAGCTATTGACTACAGTCGAGCTGAAGCTAGCCTGAAACGTGCCATTGCCCGAATAGATGCTG
CTAGAGCACAAAGAAATGATGACTAG

Upstream 100 bases:

>100_bases
TGACGATTTACCAGAGACTGCTTTTTACATGGTGGGAACCATTGACGAAGCCGTGGAAAAAGCAGAAGAATAACTGTCTC
CCGGGAAAGGGTGTTGTTAG

Downstream 100 bases:

>100_bases
ATGACCAATTATTGATAAAGTTAATAGGGTGGCTATTAAGTATAACTAGAGCAAAAAAGGGTATATTAACTATTGAGTAT
AGATCAAAAGGCTCCCGATG

Product: ATP synthase F1, epsilon subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MARKEFQLEIVTPERIVYSDKVVSITAQAEDGRLGILHDHRPLVTKLQIAPFSFITQEGQEENVAISGSGYLEVTPQKVT
VLCQTAELSHEIELERAQEAKERAEERLQASDEAIDYSRAEASLKRAIARIDAARAQRNDD

Sequences:

>Translated_141_residues
MARKEFQLEIVTPERIVYSDKVVSITAQAEDGRLGILHDHRPLVTKLQIAPFSFITQEGQEENVAISGSGYLEVTPQKVT
VLCQTAELSHEIELERAQEAKERAEERLQASDEAIDYSRAEASLKRAIARIDAARAQRNDD
>Mature_140_residues
ARKEFQLEIVTPERIVYSDKVVSITAQAEDGRLGILHDHRPLVTKLQIAPFSFITQEGQEENVAISGSGYLEVTPQKVTV
LCQTAELSHEIELERAQEAKERAEERLQASDEAIDYSRAEASLKRAIARIDAARAQRNDD

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=126, Percent_Identity=38.0952380952381, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_NATTJ (B2A3G1)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001918978.1
- ProteinModelPortal:   B2A3G1
- SMR:   B2A3G1
- GeneID:   6316501
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_2843
- HOGENOM:   HBG663981
- OMA:   EMVSVRA
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15819; Mature: 15688

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKEFQLEIVTPERIVYSDKVVSITAQAEDGRLGILHDHRPLVTKLQIAPFSFITQEGQ
CCCCEEEEEEECCCCEEECCEEEEEEEECCCCEEEEEECCCCCEEEEEECCHHHHHCCCC
EENVAISGSGYLEVTPQKVTVLCQTAELSHEIELERAQEAKERAEERLQASDEAIDYSRA
CCCEEECCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EASLKRAIARIDAARAQRNDD
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARKEFQLEIVTPERIVYSDKVVSITAQAEDGRLGILHDHRPLVTKLQIAPFSFITQEGQ
CCCEEEEEEECCCCEEECCEEEEEEEECCCCEEEEEECCCCCEEEEEECCHHHHHCCCC
EENVAISGSGYLEVTPQKVTVLCQTAELSHEIELERAQEAKERAEERLQASDEAIDYSRA
CCCEEECCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EASLKRAIARIDAARAQRNDD
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA