| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587406
Identifier: 188587406
GI number: 188587406
Start: 3043216
End: 3043479
Strand: Reverse
Name: 188587406
Synonym: Nther_2815
Alternate gene names: NA
Gene position: 3043479-3043216 (Counterclockwise)
Preceding gene: 188587407
Following gene: 188587405
Centisome position: 96.14
GC content: 31.82
Gene sequence:
>264_bases TTGAGTTCTCAAGAATTTGAATTTTGTCAGGCATGTGGCAGGGAAGATAAAGAAAGTTTGGAAAATTATATGGTAAGGAA AAATTTTGCTTTTGGAAAAAACTTTCCCATTGAATATGAAGAGATGAGTCTGTGTATTCAGTGTAGGGAGAACTATGAAC GTAAAAATAGTCGTATGAAAGTCTTGGCAGTTATAGTTTTAGCTGTGATTTTAATTTTTATGGGGATTAATTTCACTATT TTAATAAGCCCAGCCATTTTTTGA
Upstream 100 bases:
>100_bases TTGGACTTGCCCCTTCTTTAACCCTCAATGACCCCCATAGGAAGAAAAAATGTAGATCAATTTATATTATAGCCCAAGCT TTATCTTGGAGGTGAAAAAG
Downstream 100 bases:
>100_bases TTTTTTTGAAAATATTTTAAAATTTTAAAGGAAAAAAGTAGTTGCGTGTCGAATATACTTTATTACTATATTCCTTTTGG ATTATCTTTGAGAATTAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSSQEFEFCQACGREDKESLENYMVRKNFAFGKNFPIEYEEMSLCIQCRENYERKNSRMKVLAVIVLAVILIFMGINFTI LISPAIF
Sequences:
>Translated_87_residues MSSQEFEFCQACGREDKESLENYMVRKNFAFGKNFPIEYEEMSLCIQCRENYERKNSRMKVLAVIVLAVILIFMGINFTI LISPAIF >Mature_86_residues SSQEFEFCQACGREDKESLENYMVRKNFAFGKNFPIEYEEMSLCIQCRENYERKNSRMKVLAVIVLAVILIFMGINFTIL ISPAIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10188; Mature: 10057
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQEFEFCQACGREDKESLENYMVRKNFAFGKNFPIEYEEMSLCIQCRENYERKNSRMK CCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLAVIVLAVILIFMGINFTILISPAIF HHHHHHHHHHHHHHCCCEEEEECCCCC >Mature Secondary Structure SSQEFEFCQACGREDKESLENYMVRKNFAFGKNFPIEYEEMSLCIQCRENYERKNSRMK CCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLAVIVLAVILIFMGINFTILISPAIF HHHHHHHHHHHHHHCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA