Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 188587390

GI number: 188587390

Start: 3024907

End: 3026295

Strand: Reverse

Name: rpfG [H]

Synonym: Nther_2799

Alternate gene names: 188587390

Gene position: 3026295-3024907 (Counterclockwise)

Preceding gene: 188587391

Following gene: 188587389

Centisome position: 95.6

GC content: 32.76

Gene sequence:

>1389_bases
ATGAACGGACAAGATAAAGGAATTTTCTATCAGCTCAGTCACAAATACTCTTTACTGCATCAAACTAAATTCACAAAAAG
TTCCATGTTAGCAGTTAGTCACGCCTTAGAAGATATAGTCATATCTTCAGGTTTTAAAGCTGATATGTATGTATTTTTTC
AACACTTTAAATTTTTCATAGAAGAGATTGACAGATACTTAGAACTAGCTAAAATCTGCAATAATATTTACATTTTTACA
TCTGATGTAAAATGGAACGAATTAAAACAGCCAAACTACCCAAACAATTTAATAATAATAGAATTGAATTCTTTATCGCC
TTTGATCCAAGAATGGAATGTGATAGTAGATTATAGGCCTAACCCCATGATTCTGGCAACTAGAGAACTAGATGAACAAC
CAGATCTAATAAATTGGGAAAGAGAACCGCAAACTATGAATCAAGACAAACTTCCAGGTAAAGATGACTTTAGAGCTTTT
TTGGGTATCTTGAGTTTTGATACTAAGACAGCCTTAGATGGTGTAAAATTAGCCAGGATGAATGTACCTGAAAACTCATT
AGCGGATCCAGCGGAATCCTCTCTGTTAAGTCAGGATAATTCTAATTTGGACTCTAAAACTTCAAGGGATATAGATACAA
CGACATACTTTATTAATCGCGCTTTAAATGAAATAGAAGACAAGACAATTCAACTCAAACGAGCAAATGTACAATTACAA
GAGGAAATAAAAAATAATAAGAGAACCTCATATGAAATGATCAAAAGACTTTGTTTTGCTGCTGAGTATCGAGATGTGGA
AACTGCTTTGCACCTGATCAAAATGAGTTACTATTCCAAAGAACTTTACAGGGCTTATGGTGCTAATCCAACTGAAGTTG
AGTTAATGACCTATGCTTCCTTAACTCACGATATCGGAAAAATTGGCATACCAGATCGGATTTTAATGAAAGCAGGGCGA
TTAACAAGTGAAGAATATCAAGTTATGAAAAGACATCCTTATATTGGAGCAAGAATTTTGCAGGATTCTTCACAGCGGTT
AATTAACATGGCTAGAAATATTTGCTATTATCATCATGAAAAATATAATGGAAAGGGTTATCCATTAGGGTTAAAGGGTA
CGGATATTCCTCTGGAAGCACGCATAGTGGCTATTGCCGATGTATTTGATGCTCTGTCATCAAAAAGAGTATATAAACAA
GATTTCTCTAAAGAAAAAACTCTTCAGATTATGTTAGAAGAAAGAAATAATCATTTTGATGGGGAATTGTTAGACCTGTT
TTTTGAAATAGTTGATGAATTATTGGAGTTTAAGTTTAGACTAGAAAATTTATCTATGCATAAAACAAATACTGAATTAC
TTAATTTATATCTTCAAGAGATTAACTAA

Upstream 100 bases:

>100_bases
ATTTAAAAGATCGTAATTTCAAAGGAGCAAAATCAACTAATCCTAATACAGTCAAAAAAGCTGTTGACTTACTTGATCAA
TTGATCTGAGGGGAAATTTT

Downstream 100 bases:

>100_bases
GAAGGGTTGTTTACCCTTCTTTTTCTTTTTTATGACATTTAATAACACTTTAAAATATTAATGTATTTCATTGACAGATA
AGATGGAATATCGTAGAATA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNGQDKGIFYQLSHKYSLLHQTKFTKSSMLAVSHALEDIVISSGFKADMYVFFQHFKFFIEEIDRYLELAKICNNIYIFT
SDVKWNELKQPNYPNNLIIIELNSLSPLIQEWNVIVDYRPNPMILATRELDEQPDLINWEREPQTMNQDKLPGKDDFRAF
LGILSFDTKTALDGVKLARMNVPENSLADPAESSLLSQDNSNLDSKTSRDIDTTTYFINRALNEIEDKTIQLKRANVQLQ
EEIKNNKRTSYEMIKRLCFAAEYRDVETALHLIKMSYYSKELYRAYGANPTEVELMTYASLTHDIGKIGIPDRILMKAGR
LTSEEYQVMKRHPYIGARILQDSSQRLINMARNICYYHHEKYNGKGYPLGLKGTDIPLEARIVAIADVFDALSSKRVYKQ
DFSKEKTLQIMLEERNNHFDGELLDLFFEIVDELLEFKFRLENLSMHKTNTELLNLYLQEIN

Sequences:

>Translated_462_residues
MNGQDKGIFYQLSHKYSLLHQTKFTKSSMLAVSHALEDIVISSGFKADMYVFFQHFKFFIEEIDRYLELAKICNNIYIFT
SDVKWNELKQPNYPNNLIIIELNSLSPLIQEWNVIVDYRPNPMILATRELDEQPDLINWEREPQTMNQDKLPGKDDFRAF
LGILSFDTKTALDGVKLARMNVPENSLADPAESSLLSQDNSNLDSKTSRDIDTTTYFINRALNEIEDKTIQLKRANVQLQ
EEIKNNKRTSYEMIKRLCFAAEYRDVETALHLIKMSYYSKELYRAYGANPTEVELMTYASLTHDIGKIGIPDRILMKAGR
LTSEEYQVMKRHPYIGARILQDSSQRLINMARNICYYHHEKYNGKGYPLGLKGTDIPLEARIVAIADVFDALSSKRVYKQ
DFSKEKTLQIMLEERNNHFDGELLDLFFEIVDELLEFKFRLENLSMHKTNTELLNLYLQEIN
>Mature_462_residues
MNGQDKGIFYQLSHKYSLLHQTKFTKSSMLAVSHALEDIVISSGFKADMYVFFQHFKFFIEEIDRYLELAKICNNIYIFT
SDVKWNELKQPNYPNNLIIIELNSLSPLIQEWNVIVDYRPNPMILATRELDEQPDLINWEREPQTMNQDKLPGKDDFRAF
LGILSFDTKTALDGVKLARMNVPENSLADPAESSLLSQDNSNLDSKTSRDIDTTTYFINRALNEIEDKTIQLKRANVQLQ
EEIKNNKRTSYEMIKRLCFAAEYRDVETALHLIKMSYYSKELYRAYGANPTEVELMTYASLTHDIGKIGIPDRILMKAGR
LTSEEYQVMKRHPYIGARILQDSSQRLINMARNICYYHHEKYNGKGYPLGLKGTDIPLEARIVAIADVFDALSSKRVYKQ
DFSKEKTLQIMLEERNNHFDGELLDLFFEIVDELLEFKFRLENLSMHKTNTELLNLYLQEIN

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 53879; Mature: 53879

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQDKGIFYQLSHKYSLLHQTKFTKSSMLAVSHALEDIVISSGFKADMYVFFQHFKFFI
CCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
EEIDRYLELAKICNNIYIFTSDVKWNELKQPNYPNNLIIIELNSLSPLIQEWNVIVDYRP
HHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCEEEEEECCCCHHHHCCCEEEEECC
NPMILATRELDEQPDLINWEREPQTMNQDKLPGKDDFRAFLGILSFDTKTALDGVKLARM
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEEE
NVPENSLADPAESSLLSQDNSNLDSKTSRDIDTTTYFINRALNEIEDKTIQLKRANVQLQ
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHH
EEIKNNKRTSYEMIKRLCFAAEYRDVETALHLIKMSYYSKELYRAYGANPTEVELMTYAS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
LTHDIGKIGIPDRILMKAGRLTSEEYQVMKRHPYIGARILQDSSQRLINMARNICYYHHE
HHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KYNGKGYPLGLKGTDIPLEARIVAIADVFDALSSKRVYKQDFSKEKTLQIMLEERNNHFD
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHEECCCCCCC
GELLDLFFEIVDELLEFKFRLENLSMHKTNTELLNLYLQEIN
HHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNGQDKGIFYQLSHKYSLLHQTKFTKSSMLAVSHALEDIVISSGFKADMYVFFQHFKFFI
CCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
EEIDRYLELAKICNNIYIFTSDVKWNELKQPNYPNNLIIIELNSLSPLIQEWNVIVDYRP
HHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCEEEEEECCCCHHHHCCCEEEEECC
NPMILATRELDEQPDLINWEREPQTMNQDKLPGKDDFRAFLGILSFDTKTALDGVKLARM
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEEE
NVPENSLADPAESSLLSQDNSNLDSKTSRDIDTTTYFINRALNEIEDKTIQLKRANVQLQ
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHH
EEIKNNKRTSYEMIKRLCFAAEYRDVETALHLIKMSYYSKELYRAYGANPTEVELMTYAS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
LTHDIGKIGIPDRILMKAGRLTSEEYQVMKRHPYIGARILQDSSQRLINMARNICYYHHE
HHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KYNGKGYPLGLKGTDIPLEARIVAIADVFDALSSKRVYKQDFSKEKTLQIMLEERNNHFD
CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHEECCCCCCC
GELLDLFFEIVDELLEFKFRLENLSMHKTNTELLNLYLQEIN
HHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]