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The map label for this gene is yoeC [H]

Identifier: 188587313

GI number: 188587313

Start: 2933989

End: 2934498

Strand: Reverse

Name: yoeC [H]

Synonym: Nther_2717

Alternate gene names: 188587313

Gene position: 2934498-2933989 (Counterclockwise)

Preceding gene: 188587314

Following gene: 188587312

Centisome position: 92.7

GC content: 37.06

Gene sequence:

>510_bases
ATGCGTGCCTCTAACAGACATGAATGTCAAGGATCTGAACCCATTTTTGATCTAAATATCGTGCGGTCAATTAAAAATGA
TCTACTCCAAAAGGGAGAGTTTAAGGCTTATTTGTTATTTAAGCTGGGGACATCTACACCACTAACGCTTGAACAGCTAC
TAAAATTACGAGTTAAAGATTTAACATCAGATGAAGTCAAGCTCTACTTATCTCCAAGTTTCCCCCGGGAAATCAATGAT
TTCTTGCAATCACAGCCTGAAAATCAAGAACTATTTTCCCATAAGGAATTTCAAGCTGTGAAAGACAGAGCTGTTACCCA
CGGAGTGATAGATTTTGACCAGGAAACAATGCGCAAGACTTTTGGCTACCATTATTTTCAAAAAACCAGGGATATCAGAA
AAGTTGAACAGGCTTTGAATATGAAACCAGAAACCTTTACTTTCAAATATATAGGGTATTACGATGAAACTTACTATTGC
TTTTATTGTACCAAAGGCTGCCTTTGGTAA

Upstream 100 bases:

>100_bases
TTTCGGAAGAAACTGAGCAAATCGATAAGGCTAGAAACCTTCCGTCTGTGGAATTTCGCTATCAAAGTAATTTTTAATCC
TCTTCTATGGAGGTGTTAAA

Downstream 100 bases:

>100_bases
CTTTTTTTATTGGTGTAGAGCTTTTATGAAAAGTGCTGTTATATTTAGCTGTTGAACTGTGAAATTTTCAAACGAACGGA
TTGAAATTTTACAGTTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRASNRHECQGSEPIFDLNIVRSIKNDLLQKGEFKAYLLFKLGTSTPLTLEQLLKLRVKDLTSDEVKLYLSPSFPREIND
FLQSQPENQELFSHKEFQAVKDRAVTHGVIDFDQETMRKTFGYHYFQKTRDIRKVEQALNMKPETFTFKYIGYYDETYYC
FYCTKGCLW

Sequences:

>Translated_169_residues
MRASNRHECQGSEPIFDLNIVRSIKNDLLQKGEFKAYLLFKLGTSTPLTLEQLLKLRVKDLTSDEVKLYLSPSFPREIND
FLQSQPENQELFSHKEFQAVKDRAVTHGVIDFDQETMRKTFGYHYFQKTRDIRKVEQALNMKPETFTFKYIGYYDETYYC
FYCTKGCLW
>Mature_169_residues
MRASNRHECQGSEPIFDLNIVRSIKNDLLQKGEFKAYLLFKLGTSTPLTLEQLLKLRVKDLTSDEVKLYLSPSFPREIND
FLQSQPENQELFSHKEFQAVKDRAVTHGVIDFDQETMRKTFGYHYFQKTRDIRKVEQALNMKPETFTFKYIGYYDETYYC
FYCTKGCLW

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 20085; Mature: 20085

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASNRHECQGSEPIFDLNIVRSIKNDLLQKGEFKAYLLFKLGTSTPLTLEQLLKLRVKD
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHC
LTSDEVKLYLSPSFPREINDFLQSQPENQELFSHKEFQAVKDRAVTHGVIDFDQETMRKT
CCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FGYHYFQKTRDIRKVEQALNMKPETFTFKYIGYYDETYYCFYCTKGCLW
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCC
>Mature Secondary Structure
MRASNRHECQGSEPIFDLNIVRSIKNDLLQKGEFKAYLLFKLGTSTPLTLEQLLKLRVKD
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHC
LTSDEVKLYLSPSFPREINDFLQSQPENQELFSHKEFQAVKDRAVTHGVIDFDQETMRKT
CCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FGYHYFQKTRDIRKVEQALNMKPETFTFKYIGYYDETYYCFYCTKGCLW
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]