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The map label for this gene is 188587290

Identifier: 188587290

GI number: 188587290

Start: 2904585

End: 2905154

Strand: Reverse

Name: 188587290

Synonym: Nther_2693

Alternate gene names: NA

Gene position: 2905154-2904585 (Counterclockwise)

Preceding gene: 188587291

Following gene: 188587288

Centisome position: 91.77

GC content: 40.88

Gene sequence:

>570_bases
ATGGTATTTAAAGTCCAACAAAAATTAACTATAGCACTAGTAATTGTTTTATTAGCAAGTATTCCTTTGGTAAGTAAAAC
ACTCGGCGCCGATGATTATATTGACATTGCCGATTCATACGCAGTTGATGAAATTGAGGCATTATCAGATGAAGGAATAA
TTACCGGTGACCCCGAGGGTACTTTCAGGCCAAGTGACAGTATTAACCGTGCTGAATTTGCTGCTGTTATAACTAGGGCT
TTAGAATTGGACGAGCTCCCAGAAAAGGGAACAGGCTTTGAAGATGTTCATGAAAGAGATTGGTATGCCGGGTATGTAGG
TGCGCTGGTTGATGCTGGAATAACTACAGGGACAACAGAAACCACATTTTCTCCAGATGACCCTGTAACCAGAGAAGAGT
TGGCAGTGTTTTTCGTGAGAGCTTTCGATTTAGAAGAAGACGCCAAGAAATTAACTGATAAACCGAATATTAATGACCTT
GATCAAGTGTCTAGCTGGGCCAAAGACTATGTAGCTCTAGATCCGGCATTAAACGAAGGGGGAGTAGTAACAAATCTTTC
CAGAAACTAA

Upstream 100 bases:

>100_bases
TCAAATGCTACTATTAAAATTGCTGACAATTCAAAGTTAACTATAGGAGGTGATATTAAGAATTGTTAATAGGAATCTAC
AAAGGAGGAGTTGGTTAGAT

Downstream 100 bases:

>100_bases
AACCATCCTCTACTTATAATAGAGGATGGTTTAGAATTCTTACTACTTTGTTCTAATCTCAATAACCTCTTCTCCACTTA
TCCAATCTACATTATGGCCT

Product: S-layer domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVFKVQQKLTIALVIVLLASIPLVSKTLGADDYIDIADSYAVDEIEALSDEGIITGDPEGTFRPSDSINRAEFAAVITRA
LELDELPEKGTGFEDVHERDWYAGYVGALVDAGITTGTTETTFSPDDPVTREELAVFFVRAFDLEEDAKKLTDKPNINDL
DQVSSWAKDYVALDPALNEGGVVTNLSRN

Sequences:

>Translated_189_residues
MVFKVQQKLTIALVIVLLASIPLVSKTLGADDYIDIADSYAVDEIEALSDEGIITGDPEGTFRPSDSINRAEFAAVITRA
LELDELPEKGTGFEDVHERDWYAGYVGALVDAGITTGTTETTFSPDDPVTREELAVFFVRAFDLEEDAKKLTDKPNINDL
DQVSSWAKDYVALDPALNEGGVVTNLSRN
>Mature_189_residues
MVFKVQQKLTIALVIVLLASIPLVSKTLGADDYIDIADSYAVDEIEALSDEGIITGDPEGTFRPSDSINRAEFAAVITRA
LELDELPEKGTGFEDVHERDWYAGYVGALVDAGITTGTTETTFSPDDPVTREELAVFFVRAFDLEEDAKKLTDKPNINDL
DQVSSWAKDYVALDPALNEGGVVTNLSRN

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001119 [H]

Pfam domain/function: PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 20602; Mature: 20602

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKVQQKLTIALVIVLLASIPLVSKTLGADDYIDIADSYAVDEIEALSDEGIITGDPEG
CEEEHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCC
TFRPSDSINRAEFAAVITRALELDELPEKGTGFEDVHERDWYAGYVGALVDAGITTGTTE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
TTFSPDDPVTREELAVFFVRAFDLEEDAKKLTDKPNINDLDQVSSWAKDYVALDPALNEG
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCC
GVVTNLSRN
CEEECCCCC
>Mature Secondary Structure
MVFKVQQKLTIALVIVLLASIPLVSKTLGADDYIDIADSYAVDEIEALSDEGIITGDPEG
CEEEHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCC
TFRPSDSINRAEFAAVITRALELDELPEKGTGFEDVHERDWYAGYVGALVDAGITTGTTE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
TTFSPDDPVTREELAVFFVRAFDLEEDAKKLTDKPNINDLDQVSSWAKDYVALDPALNEG
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCC
GVVTNLSRN
CEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2666389 [H]