| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is tynA [C]
Identifier: 188587289
GI number: 188587289
Start: 2902998
End: 2904542
Strand: Direct
Name: tynA [C]
Synonym: Nther_2692
Alternate gene names: 188587289
Gene position: 2902998-2904542 (Clockwise)
Preceding gene: 188587281
Following gene: 188587301
Centisome position: 91.71
GC content: 38.83
Gene sequence:
>1545_bases ATGTCGATATTTCAAAGAACTGTGTTTTTATCTTTAATTATTATTCTATTACTTTCGTGTCTTTCGTCTTTGGCCTTTGC TTCAAGTGATCTTACAACAAAAGAGGACAAGTTAGTAGAAACCGATAGAGGTGATTATCGTGTAAACTATATTAAAATAC CTCTAGCCGGTGATTATGGTTTTACAACTTCATATGATGAAGTGGGCACTGTTGATTCCCTATCTTCCCATGCCCAAAGG GAAGACGGTATAGCTGCCATCAACGGTACCTTCTTCGATGCTTACACTTCTGAAGATGATGAAAGGTATCCTTCTGGTGC AATTATGAAAGATGGACAATTGCTTCATCTTATGGGTTTTGGCTCTACCTTTGCTGTTAAAAGTGATGATGGTATCAAAA ATATTAAAGATCTAGACGTTTCTCGAATGAGATTTGGTCTAAACCTGGTTATTGAAGACCGTGATATCAGAATTGGTAGG ATAAACCATCCTTCTGATAATTCTAACATGATCATTGCATATACTCCTGAATTTTCTAAAGATGTGATAGATGAACAAGG AACAAAATTAGTTGTAGAAAATAACAGAATTGTAGAATTCACTGATGGACCAGCAGAGATACCGGAAAACGGTTTTGTCG TCGAACTTGGTACACAACAGGCGGTTTCACAACTCCCAGAAAACTATTCCCCAGGAGATAAAGCAAAACTCAAACCATCT GTTAGTGACGAAGATAGAGAGGAGCCAATTGAAATAGAAGATTTTATTCATATGGTTGGAGCCGGACCAAAACTTGTCAA TAATGGTAGAGAAGATGTTGATCTAGAAAAAGACCAGATGACCGGTGAGAGGCATACTATCAAGGCTCGAAGAAGCTTCA TTGGTTACAATGACAATGAAGTGATCATGGGAACTGTTGACGGTGCTAACCATGAAGATACGGCTGCTATATGTGTTGAA TTAGGACTGACAGAAGCTATGGCTCTAGACGGTGGTGCAAGTTCAGGTCTTTATTATGAAGGTGATTACATAACAAGGCC CGGTAGAGAAATTAGTAATGCTTTGGTTGTAAACAATATAAGTGAACCGGAAGATCCAGGAATGAGCCCATCAGATGGAG GACCAGGTTCAGGTGTAGGTAGAAGCAGTATCCTTGAACTTGAACCGGGAAACTATACAGTAAAGAAATTTGACTCTAAT AGATCAGAACAAAGTAAGAAAGGTAGTTGGGAACTAGATAGTGCGCCCATTATTAGAGATGGCCGTACATTAATGCCACT GCGAGGGGTTATAGATAAATTAGGTGCTTCCCTTGATTGGGATAACAGCTCCCAAGAAGTAACGATTAAAGATGATGGAG TGGAAGTGAAGCTTACTATTGGTGAAACAACTGCTAAGGTTAATGGAGAATCCAAAATAATGGAGATTTCACCTATAATA GAAGACAGCCGGACGTTAATTCCGCTTAGATATGCAAATGAGCTTTTAGGCCATAATGTAGATTGGATAAGTGGAGAAGA GGTTATTGAGATTAGAACAAAGTAG
Upstream 100 bases:
>100_bases CTGAAGATTTTTCTTCTTTATTCCAGTTTTTTGCAGGTAGTTTTATTTATAAAGAGAATATATTACTGTGTGTTAATCTT ATATAGATAGGGGGATTTAA
Downstream 100 bases:
>100_bases TAAGAATTCTAAACCATCCTCTATTATAAGTAGAGGATGGTTTTAGTTTCTGGAAAGATTTGTTACTACTCCCCCTTCGT TTAATGCCGGATCTAGAGCT
Product: copper amine oxidase domain protein
Products: Hydrogen peroxide; ammonia; Phenylacetaldehyde [C]
Alternate protein names: Copper Amine Oxidase Domain-Containing Protein; Copper Amine Oxidase-Like Protein; N-Acetylmuramoyl-L-Alanine Amidase; Copper Amine Oxidase N- Domain Family; Copper Amine Oxidase-Like; Cell Wall Hydrolase/Autolysin; Copper Amine Oxidase N- Domain Protein; Protease; Amylopullulanase; SCP-Like Extracellular Protease; Peptidase; Papain Family Cysteine Protease; D-Alanyl-D-Alanine Carboxypeptidase; Minor Extracellular Protease
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSIFQRTVFLSLIIILLLSCLSSLAFASSDLTTKEDKLVETDRGDYRVNYIKIPLAGDYGFTTSYDEVGTVDSLSSHAQR EDGIAAINGTFFDAYTSEDDERYPSGAIMKDGQLLHLMGFGSTFAVKSDDGIKNIKDLDVSRMRFGLNLVIEDRDIRIGR INHPSDNSNMIIAYTPEFSKDVIDEQGTKLVVENNRIVEFTDGPAEIPENGFVVELGTQQAVSQLPENYSPGDKAKLKPS VSDEDREEPIEIEDFIHMVGAGPKLVNNGREDVDLEKDQMTGERHTIKARRSFIGYNDNEVIMGTVDGANHEDTAAICVE LGLTEAMALDGGASSGLYYEGDYITRPGREISNALVVNNISEPEDPGMSPSDGGPGSGVGRSSILELEPGNYTVKKFDSN RSEQSKKGSWELDSAPIIRDGRTLMPLRGVIDKLGASLDWDNSSQEVTIKDDGVEVKLTIGETTAKVNGESKIMEISPII EDSRTLIPLRYANELLGHNVDWISGEEVIEIRTK
Sequences:
>Translated_514_residues MSIFQRTVFLSLIIILLLSCLSSLAFASSDLTTKEDKLVETDRGDYRVNYIKIPLAGDYGFTTSYDEVGTVDSLSSHAQR EDGIAAINGTFFDAYTSEDDERYPSGAIMKDGQLLHLMGFGSTFAVKSDDGIKNIKDLDVSRMRFGLNLVIEDRDIRIGR INHPSDNSNMIIAYTPEFSKDVIDEQGTKLVVENNRIVEFTDGPAEIPENGFVVELGTQQAVSQLPENYSPGDKAKLKPS VSDEDREEPIEIEDFIHMVGAGPKLVNNGREDVDLEKDQMTGERHTIKARRSFIGYNDNEVIMGTVDGANHEDTAAICVE LGLTEAMALDGGASSGLYYEGDYITRPGREISNALVVNNISEPEDPGMSPSDGGPGSGVGRSSILELEPGNYTVKKFDSN RSEQSKKGSWELDSAPIIRDGRTLMPLRGVIDKLGASLDWDNSSQEVTIKDDGVEVKLTIGETTAKVNGESKIMEISPII EDSRTLIPLRYANELLGHNVDWISGEEVIEIRTK >Mature_513_residues SIFQRTVFLSLIIILLLSCLSSLAFASSDLTTKEDKLVETDRGDYRVNYIKIPLAGDYGFTTSYDEVGTVDSLSSHAQRE DGIAAINGTFFDAYTSEDDERYPSGAIMKDGQLLHLMGFGSTFAVKSDDGIKNIKDLDVSRMRFGLNLVIEDRDIRIGRI NHPSDNSNMIIAYTPEFSKDVIDEQGTKLVVENNRIVEFTDGPAEIPENGFVVELGTQQAVSQLPENYSPGDKAKLKPSV SDEDREEPIEIEDFIHMVGAGPKLVNNGREDVDLEKDQMTGERHTIKARRSFIGYNDNEVIMGTVDGANHEDTAAICVEL GLTEAMALDGGASSGLYYEGDYITRPGREISNALVVNNISEPEDPGMSPSDGGPGSGVGRSSILELEPGNYTVKKFDSNR SEQSKKGSWELDSAPIIRDGRTLMPLRGVIDKLGASLDWDNSSQEVTIKDDGVEVKLTIGETTAKVNGESKIMEISPIIE DSRTLIPLRYANELLGHNVDWISGEEVIEIRTK
Specific function: The Enzyme Prefers Aromatic Over Aliphatic Amines. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.4.3.6 [C]
Molecular weight: Translated: 56409; Mature: 56277
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFQRTVFLSLIIILLLSCLSSLAFASSDLTTKEDKLVETDRGDYRVNYIKIPLAGDYG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCC FTTSYDEVGTVDSLSSHAQREDGIAAINGTFFDAYTSEDDERYPSGAIMKDGQLLHLMGF CCCCCCCCCCHHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCCCCCEEECCCEEEEEEC GSTFAVKSDDGIKNIKDLDVSRMRFGLNLVIEDRDIRIGRINHPSDNSNMIIAYTPEFSK CCEEEEECCCCCCCHHHCCHHHHEECCEEEEECCCEEEEECCCCCCCCCEEEEECCCCCH DVIDEQGTKLVVENNRIVEFTDGPAEIPENGFVVELGTQQAVSQLPENYSPGDKAKLKPS HHHCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCEECCC VSDEDREEPIEIEDFIHMVGAGPKLVNNGREDVDLEKDQMTGERHTIKARRSFIGYNDNE CCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCE VIMGTVDGANHEDTAAICVELGLTEAMALDGGASSGLYYEGDYITRPGREISNALVVNNI EEEEEECCCCCCCCEEEEEECCCCHHEEECCCCCCCEEECCCEEECCCHHHCCEEEECCC SEPEDPGMSPSDGGPGSGVGRSSILELEPGNYTVKKFDSNRSEQSKKGSWELDSAPIIRD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEC GRTLMPLRGVIDKLGASLDWDNSSQEVTIKDDGVEVKLTIGETTAKVNGESKIMEISPII CCEECHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCEEEEECCCCEEEEECCCC EDSRTLIPLRYANELLGHNVDWISGEEVIEIRTK CCCCEEEEHHHHHHHHCCCCCEECCCEEEEEECC >Mature Secondary Structure SIFQRTVFLSLIIILLLSCLSSLAFASSDLTTKEDKLVETDRGDYRVNYIKIPLAGDYG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCC FTTSYDEVGTVDSLSSHAQREDGIAAINGTFFDAYTSEDDERYPSGAIMKDGQLLHLMGF CCCCCCCCCCHHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCCCCCEEECCCEEEEEEC GSTFAVKSDDGIKNIKDLDVSRMRFGLNLVIEDRDIRIGRINHPSDNSNMIIAYTPEFSK CCEEEEECCCCCCCHHHCCHHHHEECCEEEEECCCEEEEECCCCCCCCCEEEEECCCCCH DVIDEQGTKLVVENNRIVEFTDGPAEIPENGFVVELGTQQAVSQLPENYSPGDKAKLKPS HHHCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCEECCC VSDEDREEPIEIEDFIHMVGAGPKLVNNGREDVDLEKDQMTGERHTIKARRSFIGYNDNE CCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCE VIMGTVDGANHEDTAAICVELGLTEAMALDGGASSGLYYEGDYITRPGREISNALVVNNI EEEEEECCCCCCCCEEEEEECCCCHHEEECCCCCCCEEECCCEEECCCHHHCCEEEECCC SEPEDPGMSPSDGGPGSGVGRSSILELEPGNYTVKKFDSNRSEQSKKGSWELDSAPIIRD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEC GRTLMPLRGVIDKLGASLDWDNSSQEVTIKDDGVEVKLTIGETTAKVNGESKIMEISPII CCEECHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCEEEEECCCCEEEEECCCC EDSRTLIPLRYANELLGHNVDWISGEEVIEIRTK CCCCEEEEHHHHHHHHCCCCCEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyrroloquinoline-quinone [C]
Metal ions: Co2+; Copper; Manganese; Zn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; O2; Phenethylamine [C]
Specific reaction: H2O + O2 + Phenethylamine --> Hydrogen peroxide + ammonia + Phenylacetaldehyde [C]
General reaction: Deamination; Redox reaction [C]
Inhibitor: 3, 5-Ethoxy-4-aminomethyl pyridine*2 HCl; Aminoguanidine; Arcaine sulfate; Azide; beta-Bromoethyl amine; Cuprizone; Cyanide; Diethyl dithiocarbamate; Histamine; Hydroxylamine; Iproniazid; Isoniazid selective inhibitors; N-Isopropyl - alpha-(2-methyl -hydr
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA