| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is exuT [H]
Identifier: 188587274
GI number: 188587274
Start: 2884110
End: 2885408
Strand: Reverse
Name: exuT [H]
Synonym: Nther_2676
Alternate gene names: 188587274
Gene position: 2885408-2884110 (Counterclockwise)
Preceding gene: 188587276
Following gene: 188587273
Centisome position: 91.15
GC content: 41.8
Gene sequence:
>1299_bases ATGACTCAAAAATACAAGATTTTTCTTGTCATGGTTGTTTCAATGATATTGGGGTATTTACCCTGGTATAACTTTTCTGC TGTCATGAGTTATATAGTTCAGGATTTTGGGTTAACCTCTGATCAGACGGGTATTATTTTATCTGCATTTCAAGGCGGTT ACGTAGTTGTTGTAATATTAACGGGTTGGTTGGCCGATAAAATTGGAGAAAAGAAGGTGGTAGCTTGGGCAACCCTTAGT ACTGCAATATTCTCAACTTTATTTGCATTCTTAAGCAAAGGGTTCTGGTCTATATTAATCTTAAGGTTGTTGACAGGTTT GTCAGCAGGGGCTATTTATGTACCCGGAATGGCATTTTTATCCAAATGGTTTCCACCCGGAGAACGTGGAAAGGTTATCG GGGCTTATACCGGTGCTCTCACTTTGGCATACGGGGGTGGATATTTCATTGCTGCTCCTCTAGCAGCAGCTTATTCTTGG GAAATTGGCATCTTAGCAACATCACTTCCAGCTTTTTTAGCTAGCTATTTGGTATTTAGGCTAGTTGAAGAGCCGCAAGA ACCGTATCTAGATGACAACAGGGCAAAGGATCAAGGTATTGAATTAACTGATGGCCAAGTAAAAACTGATAGAGACAGGC CAAAACCAGCTCCCGATGGAGGTTACACAGGACCAGTAGTGATTTCATGCGGATATATGGGTCATATGTGGGAATTGTAT GCTTTTTGGGGCTGGATAGGCCCCTTCATGAGTGCTTGTGCTTTACAAGCGGGCTATGAAGGTGGTGAAGCACTAACCAT TGGAGGGAGATTGGCTGCTCTAATTATAGTCAGTGGTGCTCCCGCCGTTTATTTAATGGGTATAGCAGCAGATAAATGGG GGAGGTCAATTACAATATTTATTTGTTCAATATTAAGTCTTCTGGGACAGTTTCTCTTCGGTTTTCTCTACGGTCACTCT CTTACTCTTGTAACAATAGTAGGATTTTGGATTGGATTCTGGGTAATTGCTGACTCGGGCATCTATAAAGCTGGTCTCAC CGAAATGGTTACTTATAAGATTCGCGGGACAGCTTTGGGTATTCAATCAGCAGCGGGTTATTTGATGACGGTAATTTCAC CTTACATTTTTGGATTGATTGTCAATTACCGGAATACAGGTGTAGATGATCCCATGTATGCTGAAAACTGGGCTCTTCCC TTTATCGTTTTGGGAAGTGGAGCTCTTTTAGCACCACTGTCTGCTGTAGTCCTCAGAAGAATCAAACAAGCCAAGTTAAT GGCAGAAGGAAAATATTGA
Upstream 100 bases:
>100_bases TACAGATTTAGAGAAATCAATTATTTTAATAGTGGAGATATGTACTCTAATATAACAGTTTTGTCCTAAAAAATCAACTT TTAAAGCTTGGTGATACAAA
Downstream 100 bases:
>100_bases AGGAATAATCTCAGGTGAATAAGTTAAGCTAAGTACTAACATCCCAAGCAGGAATAAACTAATAATTAAGTTAATTGATT TAATCGTGAAACCTAGTTTT
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTQKYKIFLVMVVSMILGYLPWYNFSAVMSYIVQDFGLTSDQTGIILSAFQGGYVVVVILTGWLADKIGEKKVVAWATLS TAIFSTLFAFLSKGFWSILILRLLTGLSAGAIYVPGMAFLSKWFPPGERGKVIGAYTGALTLAYGGGYFIAAPLAAAYSW EIGILATSLPAFLASYLVFRLVEEPQEPYLDDNRAKDQGIELTDGQVKTDRDRPKPAPDGGYTGPVVISCGYMGHMWELY AFWGWIGPFMSACALQAGYEGGEALTIGGRLAALIIVSGAPAVYLMGIAADKWGRSITIFICSILSLLGQFLFGFLYGHS LTLVTIVGFWIGFWVIADSGIYKAGLTEMVTYKIRGTALGIQSAAGYLMTVISPYIFGLIVNYRNTGVDDPMYAENWALP FIVLGSGALLAPLSAVVLRRIKQAKLMAEGKY
Sequences:
>Translated_432_residues MTQKYKIFLVMVVSMILGYLPWYNFSAVMSYIVQDFGLTSDQTGIILSAFQGGYVVVVILTGWLADKIGEKKVVAWATLS TAIFSTLFAFLSKGFWSILILRLLTGLSAGAIYVPGMAFLSKWFPPGERGKVIGAYTGALTLAYGGGYFIAAPLAAAYSW EIGILATSLPAFLASYLVFRLVEEPQEPYLDDNRAKDQGIELTDGQVKTDRDRPKPAPDGGYTGPVVISCGYMGHMWELY AFWGWIGPFMSACALQAGYEGGEALTIGGRLAALIIVSGAPAVYLMGIAADKWGRSITIFICSILSLLGQFLFGFLYGHS LTLVTIVGFWIGFWVIADSGIYKAGLTEMVTYKIRGTALGIQSAAGYLMTVISPYIFGLIVNYRNTGVDDPMYAENWALP FIVLGSGALLAPLSAVVLRRIKQAKLMAEGKY >Mature_431_residues TQKYKIFLVMVVSMILGYLPWYNFSAVMSYIVQDFGLTSDQTGIILSAFQGGYVVVVILTGWLADKIGEKKVVAWATLST AIFSTLFAFLSKGFWSILILRLLTGLSAGAIYVPGMAFLSKWFPPGERGKVIGAYTGALTLAYGGGYFIAAPLAAAYSWE IGILATSLPAFLASYLVFRLVEEPQEPYLDDNRAKDQGIELTDGQVKTDRDRPKPAPDGGYTGPVVISCGYMGHMWELYA FWGWIGPFMSACALQAGYEGGEALTIGGRLAALIIVSGAPAVYLMGIAADKWGRSITIFICSILSLLGQFLFGFLYGHSL TLVTIVGFWIGFWVIADSGIYKAGLTEMVTYKIRGTALGIQSAAGYLMTVISPYIFGLIVNYRNTGVDDPMYAENWALPF IVLGSGALLAPLSAVVLRRIKQAKLMAEGKY
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Escherichia coli, GI87082320, Length=230, Percent_Identity=24.7826086956522, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789515, Length=233, Percent_Identity=24.4635193133047, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46852; Mature: 46720
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKYKIFLVMVVSMILGYLPWYNFSAVMSYIVQDFGLTSDQTGIILSAFQGGYVVVVIL CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEE TGWLADKIGEKKVVAWATLSTAIFSTLFAFLSKGFWSILILRLLTGLSAGAIYVPGMAFL HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCCHHHH SKWFPPGERGKVIGAYTGALTLAYGGGYFIAAPLAAAYSWEIGILATSLPAFLASYLVFR HHCCCCCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVEEPQEPYLDDNRAKDQGIELTDGQVKTDRDRPKPAPDGGYTGPVVISCGYMGHMWELY HHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH AFWGWIGPFMSACALQAGYEGGEALTIGGRLAALIIVSGAPAVYLMGIAADKWGRSITIF HHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEEHHCCCCCHHHH ICSILSLLGQFLFGFLYGHSLTLVTIVGFWIGFWVIADSGIYKAGLTEMVTYKIRGTALG HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHEEEECCEEEC IQSAAGYLMTVISPYIFGLIVNYRNTGVDDPMYAENWALPFIVLGSGALLAPLSAVVLRR HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH IKQAKLMAEGKY HHHHHHHCCCCC >Mature Secondary Structure TQKYKIFLVMVVSMILGYLPWYNFSAVMSYIVQDFGLTSDQTGIILSAFQGGYVVVVIL CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEE TGWLADKIGEKKVVAWATLSTAIFSTLFAFLSKGFWSILILRLLTGLSAGAIYVPGMAFL HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCCHHHH SKWFPPGERGKVIGAYTGALTLAYGGGYFIAAPLAAAYSWEIGILATSLPAFLASYLVFR HHCCCCCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVEEPQEPYLDDNRAKDQGIELTDGQVKTDRDRPKPAPDGGYTGPVVISCGYMGHMWELY HHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH AFWGWIGPFMSACALQAGYEGGEALTIGGRLAALIIVSGAPAVYLMGIAADKWGRSITIF HHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEEHHCCCCCHHHH ICSILSLLGQFLFGFLYGHSLTLVTIVGFWIGFWVIADSGIYKAGLTEMVTYKIRGTALG HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHEEEECCEEEC IQSAAGYLMTVISPYIFGLIVNYRNTGVDDPMYAENWALPFIVLGSGALLAPLSAVVLRR HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH IKQAKLMAEGKY HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]