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The map label for this gene is ycgA [H]

Identifier: 188587266

GI number: 188587266

Start: 2874496

End: 2875878

Strand: Reverse

Name: ycgA [H]

Synonym: Nther_2668

Alternate gene names: 188587266

Gene position: 2875878-2874496 (Counterclockwise)

Preceding gene: 188587267

Following gene: 188587265

Centisome position: 90.85

GC content: 39.05

Gene sequence:

>1383_bases
TTGAAAAAAATACCGCACGTATACGTGCTGATATTCTGTATTATTATATTTTCTGCCATTGCTACTTATATAGTACCGGC
AGGAAATTTTGAGAGAGAAGTTGTAGACGGTACAGAAATGGTTGTTCCTGGTTCTTATGAAACAGTTGAATCCACCCCTG
TAGGTTTATTTGGAATTTTGAAGGCGATTCCTAATGGTATGATAGAAATGGGGTTAATCATATTTTTTATCTTCATTGTT
GGTGGTGCCTTTAGTATTCTCAAAGGAACGGGTGCTATTGATGCAGCCATCGGTACTGTTGCAAAAAAAGTCCAGGGTAA
AGAGGGTCTTTTAATACCTGTTTTAATGACTGTATTTGCTTTGCTAGCTGCTAGTATGGGATTATTAGAAGAGTTTTTAC
CTTTCATTGTACCAATAGTTATGCTCTGTTTGGCCTTGGGATTTGATTCCATAACAGGTGTTGCTATTGTTATGGTGGGA
GCTGGAAGCGGTTTCGCAGCTGCCTTTGCCAACCCTTTTACTCTTGGGGTGGCCCAGGGAATTGCAGATGTACCCATGTT
TTCAGGGATGGCATTTAGAATCCCATTATTTATTTTAGTACTTACAGTATCTATATTATATGTGTATAGATATGCAAGTA
AAATCAAAGAAAACCCTGAGTTAAGCCCTGTTTATGAAATCGATCAGAAAAGGGGCGAAGATGAACGAATTAGCCTTGAT
GATTTAGAAAGTCTAACACTAAATCATAAACTTGTGTTAGCAACAATGTTATTAGGGTTTATGATTCTGCTATACGGAGT
AATACAGCAAGGTTGGTATATTGTTGAAATAGCCGCTTTATTTTTAGGAATGGGTATTGTTGGCGGTCTGATCGGCAAGA
TCAAACCTGATGATATTGCAGAATATTTTATAGATGGTGCTAAAGCTATGGTAATGGGTGCTTTGGTAGTTGGTCTTGCT
CGAGGTATTTTGGAAGTACTAACAGCTGGACAAATTATCGATACCATTTTATTTGCTCTTTCAAATGCTGTTGAAGGCCT
CCCGGGAGTCTTTGCTGCCATGGGAATGTTTGTATTCCAAACATTTCTAAATATTTTAGTACCTTCAGGTGGTGGACAGG
CTGCGCTAACCATGCCTATTATGGCTCCATTATCTGATCTGATAGATGTATCAAGACAAACTGCTGTTTTAGCTTATCAA
TTGGGTGATGGTTTTACCAATATGATTACACCTACTCTGGGACCACTTCTCGCCGCCTTGGCACTGGCCGGAGTTAGTTG
GGAAAAATACGCCAAATGGATTTTACCCCTGATTGGCATTCTAAGTGTTATTGGATTGGGAGCAGTGACACTAGCTCATA
TGATCCAATTAGGACCTATTTAA

Upstream 100 bases:

>100_bases
ATAAGTCTGACCAAGTGTTAGAAAGTATTAGGAACCATCAAAAGTATTTGTATAGTAAAATTGTTTGAAAATTAAATTAA
AATGAAAAGGGGAGAGACCA

Downstream 100 bases:

>100_bases
TAGTAATTAGTTATCCTAAATAGATATAAAGAAATTTAAACATATAAGCTCATAAGCTATAAATAGATATCAAATAACTT
TATAGTAAAAAATTGTGTGA

Product: C4-dicarboxylate anaerobic carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKKIPHVYVLIFCIIIFSAIATYIVPAGNFEREVVDGTEMVVPGSYETVESTPVGLFGILKAIPNGMIEMGLIIFFIFIV
GGAFSILKGTGAIDAAIGTVAKKVQGKEGLLIPVLMTVFALLAASMGLLEEFLPFIVPIVMLCLALGFDSITGVAIVMVG
AGSGFAAAFANPFTLGVAQGIADVPMFSGMAFRIPLFILVLTVSILYVYRYASKIKENPELSPVYEIDQKRGEDERISLD
DLESLTLNHKLVLATMLLGFMILLYGVIQQGWYIVEIAALFLGMGIVGGLIGKIKPDDIAEYFIDGAKAMVMGALVVGLA
RGILEVLTAGQIIDTILFALSNAVEGLPGVFAAMGMFVFQTFLNILVPSGGGQAALTMPIMAPLSDLIDVSRQTAVLAYQ
LGDGFTNMITPTLGPLLAALALAGVSWEKYAKWILPLIGILSVIGLGAVTLAHMIQLGPI

Sequences:

>Translated_460_residues
MKKIPHVYVLIFCIIIFSAIATYIVPAGNFEREVVDGTEMVVPGSYETVESTPVGLFGILKAIPNGMIEMGLIIFFIFIV
GGAFSILKGTGAIDAAIGTVAKKVQGKEGLLIPVLMTVFALLAASMGLLEEFLPFIVPIVMLCLALGFDSITGVAIVMVG
AGSGFAAAFANPFTLGVAQGIADVPMFSGMAFRIPLFILVLTVSILYVYRYASKIKENPELSPVYEIDQKRGEDERISLD
DLESLTLNHKLVLATMLLGFMILLYGVIQQGWYIVEIAALFLGMGIVGGLIGKIKPDDIAEYFIDGAKAMVMGALVVGLA
RGILEVLTAGQIIDTILFALSNAVEGLPGVFAAMGMFVFQTFLNILVPSGGGQAALTMPIMAPLSDLIDVSRQTAVLAYQ
LGDGFTNMITPTLGPLLAALALAGVSWEKYAKWILPLIGILSVIGLGAVTLAHMIQLGPI
>Mature_460_residues
MKKIPHVYVLIFCIIIFSAIATYIVPAGNFEREVVDGTEMVVPGSYETVESTPVGLFGILKAIPNGMIEMGLIIFFIFIV
GGAFSILKGTGAIDAAIGTVAKKVQGKEGLLIPVLMTVFALLAASMGLLEEFLPFIVPIVMLCLALGFDSITGVAIVMVG
AGSGFAAAFANPFTLGVAQGIADVPMFSGMAFRIPLFILVLTVSILYVYRYASKIKENPELSPVYEIDQKRGEDERISLD
DLESLTLNHKLVLATMLLGFMILLYGVIQQGWYIVEIAALFLGMGIVGGLIGKIKPDDIAEYFIDGAKAMVMGALVVGLA
RGILEVLTAGQIIDTILFALSNAVEGLPGVFAAMGMFVFQTFLNILVPSGGGQAALTMPIMAPLSDLIDVSRQTAVLAYQ
LGDGFTNMITPTLGPLLAALALAGVSWEKYAKWILPLIGILSVIGLGAVTLAHMIQLGPI

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=491, Percent_Identity=37.0672097759674, Blast_Score=264, Evalue=9e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 48730; Mature: 48730

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIPHVYVLIFCIIIFSAIATYIVPAGNFEREVVDGTEMVVPGSYETVESTPVGLFGIL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHH
KAIPNGMIEMGLIIFFIFIVGGAFSILKGTGAIDAAIGTVAKKVQGKEGLLIPVLMTVFA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLAASMGLLEEFLPFIVPIVMLCLALGFDSITGVAIVMVGAGSGFAAAFANPFTLGVAQG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEEEECCCCHHHHHCCCHHHHHHHH
IADVPMFSGMAFRIPLFILVLTVSILYVYRYASKIKENPELSPVYEIDQKRGEDERISLD
HHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHH
DLESLTLNHKLVLATMLLGFMILLYGVIQQGWYIVEIAALFLGMGIVGGLIGKIKPDDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EYFIDGAKAMVMGALVVGLARGILEVLTAGQIIDTILFALSNAVEGLPGVFAAMGMFVFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TFLNILVPSGGGQAALTMPIMAPLSDLIDVSRQTAVLAYQLGDGFTNMITPTLGPLLAAL
HHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
ALAGVSWEKYAKWILPLIGILSVIGLGAVTLAHMIQLGPI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIPHVYVLIFCIIIFSAIATYIVPAGNFEREVVDGTEMVVPGSYETVESTPVGLFGIL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHH
KAIPNGMIEMGLIIFFIFIVGGAFSILKGTGAIDAAIGTVAKKVQGKEGLLIPVLMTVFA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLAASMGLLEEFLPFIVPIVMLCLALGFDSITGVAIVMVGAGSGFAAAFANPFTLGVAQG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEEEEEECCCCHHHHHCCCHHHHHHHH
IADVPMFSGMAFRIPLFILVLTVSILYVYRYASKIKENPELSPVYEIDQKRGEDERISLD
HHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHH
DLESLTLNHKLVLATMLLGFMILLYGVIQQGWYIVEIAALFLGMGIVGGLIGKIKPDDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EYFIDGAKAMVMGALVVGLARGILEVLTAGQIIDTILFALSNAVEGLPGVFAAMGMFVFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TFLNILVPSGGGQAALTMPIMAPLSDLIDVSRQTAVLAYQLGDGFTNMITPTLGPLLAAL
HHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH
ALAGVSWEKYAKWILPLIGILSVIGLGAVTLAHMIQLGPI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]