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The map label for this gene is trg [C]

Identifier: 188587251

GI number: 188587251

Start: 2855553

End: 2857304

Strand: Reverse

Name: trg [C]

Synonym: Nther_2653

Alternate gene names: 188587251

Gene position: 2857304-2855553 (Counterclockwise)

Preceding gene: 188587252

Following gene: 188587250

Centisome position: 90.26

GC content: 37.39

Gene sequence:

>1752_bases
ATGGGCTTTTTTAAGTTTTTAACGGACAAATTAAATTTTCAATGGAAGATCATAGCTCCTATAATAATAACTTTTATCAT
TCTATTCAGTGTTGTCGGTTATGGTATTTTTCAACACACTAGAGACCTTGTAATGGATCAGGGATACGAATCCTTGGAAG
CTGGTGTAGACGGAACTATTGATACATTGTCAACTGCTACCAGGGTAAACAGAATAGCTCAAGGTAGAAGTGATTCTAAC
GAAGATCAGGATATAGAAAACTTCATTATGAATGAGGCCCAGCAAGCAGCCATAAACTTCGACTTAGGAGAATCAGGCTA
CATATTTGCCATTAATGACAATAAAACTCTTCGTTTTCATTCCCTGTATCCGGAAAAAGTAGGAGATACAATTCCAGATC
AGTATCAGGAATTGTCTGAGCAAGTAATTGCCGAGAGTGAAGGGTATAGCCATGAGGATTTTTTTGGTTCAAGCAATTTC
GAATTTGAGGGTGAAGAATACATTACTGTCTTCAAACCTTGGGAAAACATATATATTATAGGAGCCATGTCACGCAGTGA
GATCCTAGAACCAGCCTATGGAGTTGGAATGAATTTAATAATTTTATTTGGCATAACAACTTTGATAACTATTGGTTTAA
TATTTTATATAAGCAAGAAATCAGTTCGTCAGCCAGTTGAAAGTATCCAGAAAATGATAACTAGATTTTCAAATCGCGAC
CTGGAGGAAAAAGCGGAAGAGGCTGATCGATACCTAGAAAGAAAAGATGAGATCGGTGACATCACACGAAATCTGGCAAA
TATGCGCAAATCCTTGGCGGATTATATACAAAGTGTTGATGAAAAAGCCGATCAAGTAACTTCCCTTGCCCAGGAGCTTT
CTGCTACAATCCAAGAAAATAAAAATACGGCCAATGAAGTTTCAAAAGCTATCGAGGAAATTTCCTCTGCAGCCACCAAT
CAAGCCCAGGATACCGATGATACTTCATCAATGATAGAAGAAATGGGTAATCAGATTCAAAGTAATCAGGAGATAGTAGA
AACATTAAATGATACTGTGAACAAAATAGAACAAACCAAAAATGAAGGAGCCGGAATTGTTGATAAGCTGACAACTGCTA
ATAAAGAAAGTCAAGAATCAACAGAGAAAGTTTATCAAGTCATCCGGGAAACAAATGATAGTGCTGAAGAAATTCAAAAA
GCCAGTGAAGCCGTGAGAGAAATAGCAGAACAAACTAACTTACTAGCACTAAACGCGGCAATAGAAGCTGCCAGGGCTGG
AGAATATGGCCGCGGTTTTAGTGTGGTTGCCGATGAAATCAGAAAACTTGCAGAAGATAGTAATGAGTATTCGGAAAATA
TTAACCAAATAGTTACTCAACTTACAGATAAGGTTAAAAATACTGTAGAAACTGTTGATACAGTAAGAAATGAGACAATA
CCTCAGCAGAACCAGTGTGTTTCAAATACTAGTGAAAAGTTTCAGGAACTAGCCGAAGCTATTGATACAGTAGATAAAGT
CAGCCAGGATCTTAACAAAGCCAGTGAGAAAATGGCCCAGCAAGAATCTAAGATTCAAGAAAAAGTACAAAATCTAGCAG
CTATTGCCGAAGAAAACTCTGCCAATACCGAAGAATCATCTGCTTCCATGGAAGAACAATCTTCTTCCCTAGAACAAATT
GCTAAAGCAGGTAATGACCTGGCCAAACTTGCTGAAGAAATGAAAGAAAGTGTCTCACAGTTTAAAATTTAA

Upstream 100 bases:

>100_bases
AATAAATAATTATTACAAATTGCGAAATTGCATAGAGAGTACACAAAATACTAATACATGCATCTTAACTGTAACCTAAT
TTAAAGGAGTGACAATAAAT

Downstream 100 bases:

>100_bases
TAGATCTAATAGTTTAAAATTTGGCATTTAAACCTAAAGATGAAGTCAAACGCTCGGAACAGTACTGTTCCGAGCGTTTT
ATTGTGCGCCATGCATGACG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MGFFKFLTDKLNFQWKIIAPIIITFIILFSVVGYGIFQHTRDLVMDQGYESLEAGVDGTIDTLSTATRVNRIAQGRSDSN
EDQDIENFIMNEAQQAAINFDLGESGYIFAINDNKTLRFHSLYPEKVGDTIPDQYQELSEQVIAESEGYSHEDFFGSSNF
EFEGEEYITVFKPWENIYIIGAMSRSEILEPAYGVGMNLIILFGITTLITIGLIFYISKKSVRQPVESIQKMITRFSNRD
LEEKAEEADRYLERKDEIGDITRNLANMRKSLADYIQSVDEKADQVTSLAQELSATIQENKNTANEVSKAIEEISSAATN
QAQDTDDTSSMIEEMGNQIQSNQEIVETLNDTVNKIEQTKNEGAGIVDKLTTANKESQESTEKVYQVIRETNDSAEEIQK
ASEAVREIAEQTNLLALNAAIEAARAGEYGRGFSVVADEIRKLAEDSNEYSENINQIVTQLTDKVKNTVETVDTVRNETI
PQQNQCVSNTSEKFQELAEAIDTVDKVSQDLNKASEKMAQQESKIQEKVQNLAAIAEENSANTEESSASMEEQSSSLEQI
AKAGNDLAKLAEEMKESVSQFKI

Sequences:

>Translated_583_residues
MGFFKFLTDKLNFQWKIIAPIIITFIILFSVVGYGIFQHTRDLVMDQGYESLEAGVDGTIDTLSTATRVNRIAQGRSDSN
EDQDIENFIMNEAQQAAINFDLGESGYIFAINDNKTLRFHSLYPEKVGDTIPDQYQELSEQVIAESEGYSHEDFFGSSNF
EFEGEEYITVFKPWENIYIIGAMSRSEILEPAYGVGMNLIILFGITTLITIGLIFYISKKSVRQPVESIQKMITRFSNRD
LEEKAEEADRYLERKDEIGDITRNLANMRKSLADYIQSVDEKADQVTSLAQELSATIQENKNTANEVSKAIEEISSAATN
QAQDTDDTSSMIEEMGNQIQSNQEIVETLNDTVNKIEQTKNEGAGIVDKLTTANKESQESTEKVYQVIRETNDSAEEIQK
ASEAVREIAEQTNLLALNAAIEAARAGEYGRGFSVVADEIRKLAEDSNEYSENINQIVTQLTDKVKNTVETVDTVRNETI
PQQNQCVSNTSEKFQELAEAIDTVDKVSQDLNKASEKMAQQESKIQEKVQNLAAIAEENSANTEESSASMEEQSSSLEQI
AKAGNDLAKLAEEMKESVSQFKI
>Mature_582_residues
GFFKFLTDKLNFQWKIIAPIIITFIILFSVVGYGIFQHTRDLVMDQGYESLEAGVDGTIDTLSTATRVNRIAQGRSDSNE
DQDIENFIMNEAQQAAINFDLGESGYIFAINDNKTLRFHSLYPEKVGDTIPDQYQELSEQVIAESEGYSHEDFFGSSNFE
FEGEEYITVFKPWENIYIIGAMSRSEILEPAYGVGMNLIILFGITTLITIGLIFYISKKSVRQPVESIQKMITRFSNRDL
EEKAEEADRYLERKDEIGDITRNLANMRKSLADYIQSVDEKADQVTSLAQELSATIQENKNTANEVSKAIEEISSAATNQ
AQDTDDTSSMIEEMGNQIQSNQEIVETLNDTVNKIEQTKNEGAGIVDKLTTANKESQESTEKVYQVIRETNDSAEEIQKA
SEAVREIAEQTNLLALNAAIEAARAGEYGRGFSVVADEIRKLAEDSNEYSENINQIVTQLTDKVKNTVETVDTVRNETIP
QQNQCVSNTSEKFQELAEAIDTVDKVSQDLNKASEKMAQQESKIQEKVQNLAAIAEENSANTEESSASMEEQSSSLEQIA
KAGNDLAKLAEEMKESVSQFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=365, Percent_Identity=24.9315068493151, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI2367378, Length=311, Percent_Identity=26.3665594855305, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788195, Length=251, Percent_Identity=27.8884462151394, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1789453, Length=245, Percent_Identity=28.9795918367347, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788194, Length=269, Percent_Identity=23.4200743494424, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71991177, Length=334, Percent_Identity=23.3532934131737, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71991183, Length=334, Percent_Identity=23.3532934131737, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 65216; Mature: 65085

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFKFLTDKLNFQWKIIAPIIITFIILFSVVGYGIFQHTRDLVMDQGYESLEAGVDGTI
CCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCH
DTLSTATRVNRIAQGRSDSNEDQDIENFIMNEAQQAAINFDLGESGYIFAINDNKTLRFH
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE
SLYPEKVGDTIPDQYQELSEQVIAESEGYSHEDFFGSSNFEFEGEEYITVFKPWENIYII
CCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCEEEE
GAMSRSEILEPAYGVGMNLIILFGITTLITIGLIFYISKKSVRQPVESIQKMITRFSNRD
EECCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LEEKAEEADRYLERKDEIGDITRNLANMRKSLADYIQSVDEKADQVTSLAQELSATIQEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNTANEVSKAIEEISSAATNQAQDTDDTSSMIEEMGNQIQSNQEIVETLNDTVNKIEQTK
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
NEGAGIVDKLTTANKESQESTEKVYQVIRETNDSAEEIQKASEAVREIAEQTNLLALNAA
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH
IEAARAGEYGRGFSVVADEIRKLAEDSNEYSENINQIVTQLTDKVKNTVETVDTVRNETI
HHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQQNQCVSNTSEKFQELAEAIDTVDKVSQDLNKASEKMAQQESKIQEKVQNLAAIAEENS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ANTEESSASMEEQSSSLEQIAKAGNDLAKLAEEMKESVSQFKI
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFFKFLTDKLNFQWKIIAPIIITFIILFSVVGYGIFQHTRDLVMDQGYESLEAGVDGTI
CHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCH
DTLSTATRVNRIAQGRSDSNEDQDIENFIMNEAQQAAINFDLGESGYIFAINDNKTLRFH
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE
SLYPEKVGDTIPDQYQELSEQVIAESEGYSHEDFFGSSNFEFEGEEYITVFKPWENIYII
CCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCEEEE
GAMSRSEILEPAYGVGMNLIILFGITTLITIGLIFYISKKSVRQPVESIQKMITRFSNRD
EECCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LEEKAEEADRYLERKDEIGDITRNLANMRKSLADYIQSVDEKADQVTSLAQELSATIQEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNTANEVSKAIEEISSAATNQAQDTDDTSSMIEEMGNQIQSNQEIVETLNDTVNKIEQTK
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
NEGAGIVDKLTTANKESQESTEKVYQVIRETNDSAEEIQKASEAVREIAEQTNLLALNAA
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH
IEAARAGEYGRGFSVVADEIRKLAEDSNEYSENINQIVTQLTDKVKNTVETVDTVRNETI
HHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQQNQCVSNTSEKFQELAEAIDTVDKVSQDLNKASEKMAQQESKIQEKVQNLAAIAEENS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ANTEESSASMEEQSSSLEQIAKAGNDLAKLAEEMKESVSQFKI
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA