| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587246
Identifier: 188587246
GI number: 188587246
Start: 2847239
End: 2849101
Strand: Direct
Name: 188587246
Synonym: Nther_2648
Alternate gene names: NA
Gene position: 2847239-2849101 (Clockwise)
Preceding gene: 188587245
Following gene: 188587269
Centisome position: 89.94
GC content: 33.49
Gene sequence:
>1863_bases TTGAAAAATTTCGTACTGTCAATTACCGTAATTGTTACGTTGATTGTTGCATTAACCGGCACTGCATTTGCTGGAGAAGA AGAAATTGAAATTTATATCGACGGCGAACCGGTAGAGCCAGAACAATCCCCTTATCTTGATGAAAATAATCGTACTCTTG TTCCTTTGAGGTTCATAAGTGAACAGTTGGGAGCCAAAGTAGATTGGAACAGTACTACAGAAACGATAACTGTGAACCAA GATTTTGTAGTTAGAGAAGAAATAGACGATGAAGAAACCGATGGTATGACAGAAGGCGAACGTCAATTTGTAGAATATAT AACATTTTTTGAAGGATTTATTATAACAGAGGATTTTAATGTGATTTCAAATTTTGATACTGAATTAATAATGACTGTTG ACGAAAAGGAAATTGAAAGCCAAGCAGGGATTGTTCCTTTTTATCAAAAATTTAATGAGGAATTTATGGATAAACTAGAT GATGACCATCCTGAAGAGTTTATTAAAGAAATAATTGAACAAGAACCCAGACGAGAAGCCAATATCCCCAGTGAATTGGA TACTGAACCGGTTATCAAAAATGGCCGAACTATGGTGCCTTTAAGAATTATTGGAGAAGCTTTTGATGCTCAAGTAGCAT GGGATGACAACACGATATATATTGATAGACACTACGATTTAATAGATGAACAAGAATATGAACAATATGTGATGGATTAT CTAGATAGAGTAGAAATAAATGAGATGATAACAGAAATCTATGAAGACCATCATGTCGATGAAAATCTCGAAGATGAGGA TAAATATCAAGAACAAGAACAGGAAAATAAAAATCAGGAAGAGTCGGTAGAAGACATTACTGACTTATCAGCCATGGAAA TTGCCGTAAGAGCAGAGGAATACATGGAAGAACAAAATACTTATCAGAGTAATCTAGAAGGTTTAATTAAACTAGATATA TCTTTTTCAAACCTCTCTGAATCTGAAGCAAGTTTTGATGAAAAAATACCCGAGATAGAAATACCGGTTACTGCAGAAAG TAATTTTAGACATGATCCAATGGCTCTATATGCTATCCAGGAATATGATCTTAAAACGGAAGAATTACCTAGCATAGCTA ATATGGGTTTAGGATTGGATTCCAATGATAAGAGGCAGGAACTATATATCACAGAGGATAAAATCTATCAAAAGATGGAA GCCGAACAGTGGGTTAAACCATCATTGCTAGAAAAAAATGTTGTGAATAACATGCATTCTTTTGCATCTATTGAACCTAC AAAATTTTTAGAAATGGTAGAAAAATTTGGGATCAGTTATGATTTAGCAGGTGTAGAAGAAATAGAAGGAGATGAGCATT TTGTCTTAAATCTCCATATAAACGAAGAAGATGTAAAAGCAATAATGGAGAAATTTATGGATGAGGATTTTCAGGATATT ATGACGGTGGAGCAACAAATGAAATTTCTAGAAGATGAAACAAAAGATGAAGAACTAGGACAGATGAAACAGGAAGTAAC TGAGATCAAAGATGTAATCAATAATTTATCACTTGATTTGGATCATAGTATGTATATCAATAAAGAGAGCTTTGAGACTA AAGCTGTTACAACAGATTTGAACTTTGAAATTAATCTTTCAGAAGAACAAAATAATCAAGAGATAGAAGTAGATATTGAT ATGTCAATGGAAACAGATATGGAATTGTTTAATTACGGCGAAGACTTGGACTTTCCAGAAACTGATGATGCGATAACAAT GGAAGAATATAGGGAAAAGATGATGGAAAATGAATTTGATGAAGAATTAGAAGAGAATATAGAGGGGCAAGAAGTAGACG AGGAAACAGCTAACGAACTATAA
Upstream 100 bases:
>100_bases CATTTTCTAATAAAAGTATTGTCTCCTAAGTTTAATAAATTTAAAATAGTAACAAGTTTACTTTGGTAAAATATACAATT TTAGACTGAGGTGATTTATT
Downstream 100 bases:
>100_bases AGTGTGATAAGATTTAAGAAGTGCAAAAGGAAGGTACCAACCTTTATTTTATTTATTGTTAAGGTTGGTACCTTTTTTAA TGAACTATTAAAATATAGAA
Product: copper amine oxidase domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MKNFVLSITVIVTLIVALTGTAFAGEEEIEIYIDGEPVEPEQSPYLDENNRTLVPLRFISEQLGAKVDWNSTTETITVNQ DFVVREEIDDEETDGMTEGERQFVEYITFFEGFIITEDFNVISNFDTELIMTVDEKEIESQAGIVPFYQKFNEEFMDKLD DDHPEEFIKEIIEQEPRREANIPSELDTEPVIKNGRTMVPLRIIGEAFDAQVAWDDNTIYIDRHYDLIDEQEYEQYVMDY LDRVEINEMITEIYEDHHVDENLEDEDKYQEQEQENKNQEESVEDITDLSAMEIAVRAEEYMEEQNTYQSNLEGLIKLDI SFSNLSESEASFDEKIPEIEIPVTAESNFRHDPMALYAIQEYDLKTEELPSIANMGLGLDSNDKRQELYITEDKIYQKME AEQWVKPSLLEKNVVNNMHSFASIEPTKFLEMVEKFGISYDLAGVEEIEGDEHFVLNLHINEEDVKAIMEKFMDEDFQDI MTVEQQMKFLEDETKDEELGQMKQEVTEIKDVINNLSLDLDHSMYINKESFETKAVTTDLNFEINLSEEQNNQEIEVDID MSMETDMELFNYGEDLDFPETDDAITMEEYREKMMENEFDEELEENIEGQEVDEETANEL
Sequences:
>Translated_620_residues MKNFVLSITVIVTLIVALTGTAFAGEEEIEIYIDGEPVEPEQSPYLDENNRTLVPLRFISEQLGAKVDWNSTTETITVNQ DFVVREEIDDEETDGMTEGERQFVEYITFFEGFIITEDFNVISNFDTELIMTVDEKEIESQAGIVPFYQKFNEEFMDKLD DDHPEEFIKEIIEQEPRREANIPSELDTEPVIKNGRTMVPLRIIGEAFDAQVAWDDNTIYIDRHYDLIDEQEYEQYVMDY LDRVEINEMITEIYEDHHVDENLEDEDKYQEQEQENKNQEESVEDITDLSAMEIAVRAEEYMEEQNTYQSNLEGLIKLDI SFSNLSESEASFDEKIPEIEIPVTAESNFRHDPMALYAIQEYDLKTEELPSIANMGLGLDSNDKRQELYITEDKIYQKME AEQWVKPSLLEKNVVNNMHSFASIEPTKFLEMVEKFGISYDLAGVEEIEGDEHFVLNLHINEEDVKAIMEKFMDEDFQDI MTVEQQMKFLEDETKDEELGQMKQEVTEIKDVINNLSLDLDHSMYINKESFETKAVTTDLNFEINLSEEQNNQEIEVDID MSMETDMELFNYGEDLDFPETDDAITMEEYREKMMENEFDEELEENIEGQEVDEETANEL >Mature_620_residues MKNFVLSITVIVTLIVALTGTAFAGEEEIEIYIDGEPVEPEQSPYLDENNRTLVPLRFISEQLGAKVDWNSTTETITVNQ DFVVREEIDDEETDGMTEGERQFVEYITFFEGFIITEDFNVISNFDTELIMTVDEKEIESQAGIVPFYQKFNEEFMDKLD DDHPEEFIKEIIEQEPRREANIPSELDTEPVIKNGRTMVPLRIIGEAFDAQVAWDDNTIYIDRHYDLIDEQEYEQYVMDY LDRVEINEMITEIYEDHHVDENLEDEDKYQEQEQENKNQEESVEDITDLSAMEIAVRAEEYMEEQNTYQSNLEGLIKLDI SFSNLSESEASFDEKIPEIEIPVTAESNFRHDPMALYAIQEYDLKTEELPSIANMGLGLDSNDKRQELYITEDKIYQKME AEQWVKPSLLEKNVVNNMHSFASIEPTKFLEMVEKFGISYDLAGVEEIEGDEHFVLNLHINEEDVKAIMEKFMDEDFQDI MTVEQQMKFLEDETKDEELGQMKQEVTEIKDVINNLSLDLDHSMYINKESFETKAVTTDLNFEINLSEEQNNQEIEVDID MSMETDMELFNYGEDLDFPETDDAITMEEYREKMMENEFDEELEENIEGQEVDEETANEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72563; Mature: 72563
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFVLSITVIVTLIVALTGTAFAGEEEIEIYIDGEPVEPEQSPYLDENNRTLVPLRFIS CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHH EQLGAKVDWNSTTETITVNQDFVVREEIDDEETDGMTEGERQFVEYITFFEGFIITEDFN HHHCCEECCCCCCCEEEECCCEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCH VISNFDTELIMTVDEKEIESQAGIVPFYQKFNEEFMDKLDDDHPEEFIKEIIEQEPRREA HHHCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC NIPSELDTEPVIKNGRTMVPLRIIGEAFDAQVAWDDNTIYIDRHYDLIDEQEYEQYVMDY CCCCCCCCCHHHHCCCEEEEHHHHHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH LDRVEINEMITEIYEDHHVDENLEDEDKYQEQEQENKNQEESVEDITDLSAMEIAVRAEE HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YMEEQNTYQSNLEGLIKLDISFSNLSESEASFDEKIPEIEIPVTAESNFRHDPMALYAIQ HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEE EYDLKTEELPSIANMGLGLDSNDKRQELYITEDKIYQKMEAEQWVKPSLLEKNVVNNMHS CCCCCHHHCCHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FASIEPTKFLEMVEKFGISYDLAGVEEIEGDEHFVLNLHINEEDVKAIMEKFMDEDFQDI HHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEECHHHHHHHHHHHHCCHHHHH MTVEQQMKFLEDETKDEELGQMKQEVTEIKDVINNLSLDLDHSMYINKESFETKAVTTDL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEEC NFEINLSEEQNNQEIEVDIDMSMETDMELFNYGEDLDFPETDDAITMEEYREKMMENEFD EEEEEECCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHH EELEENIEGQEVDEETANEL HHHHHCCCCCCCCHHHHCCC >Mature Secondary Structure MKNFVLSITVIVTLIVALTGTAFAGEEEIEIYIDGEPVEPEQSPYLDENNRTLVPLRFIS CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHH EQLGAKVDWNSTTETITVNQDFVVREEIDDEETDGMTEGERQFVEYITFFEGFIITEDFN HHHCCEECCCCCCCEEEECCCEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCH VISNFDTELIMTVDEKEIESQAGIVPFYQKFNEEFMDKLDDDHPEEFIKEIIEQEPRREA HHHCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC NIPSELDTEPVIKNGRTMVPLRIIGEAFDAQVAWDDNTIYIDRHYDLIDEQEYEQYVMDY CCCCCCCCCHHHHCCCEEEEHHHHHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHH LDRVEINEMITEIYEDHHVDENLEDEDKYQEQEQENKNQEESVEDITDLSAMEIAVRAEE HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YMEEQNTYQSNLEGLIKLDISFSNLSESEASFDEKIPEIEIPVTAESNFRHDPMALYAIQ HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEE EYDLKTEELPSIANMGLGLDSNDKRQELYITEDKIYQKMEAEQWVKPSLLEKNVVNNMHS CCCCCHHHCCHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FASIEPTKFLEMVEKFGISYDLAGVEEIEGDEHFVLNLHINEEDVKAIMEKFMDEDFQDI HHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEECHHHHHHHHHHHHCCHHHHH MTVEQQMKFLEDETKDEELGQMKQEVTEIKDVINNLSLDLDHSMYINKESFETKAVTTDL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEEC NFEINLSEEQNNQEIEVDIDMSMETDMELFNYGEDLDFPETDDAITMEEYREKMMENEFD EEEEEECCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHH EELEENIEGQEVDEETANEL HHHHHCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA