| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587244
Identifier: 188587244
GI number: 188587244
Start: 2844536
End: 2845759
Strand: Direct
Name: 188587244
Synonym: Nther_2646
Alternate gene names: NA
Gene position: 2844536-2845759 (Clockwise)
Preceding gene: 188587243
Following gene: 188587245
Centisome position: 89.86
GC content: 39.71
Gene sequence:
>1224_bases TTGTCTCGTTATCTATTTAAAAACGCTAGAATTTACGATGGTGAACAACTATGGGAAAACGCCAGTCTTTTAGTTCAAGA TGGCATAATTGAAGATATTTCCGAAAGAGAGCTAGTTGATTCGGAAAATGAACAAGACTTTGAAGGCGAAGTTTATGATT TAGAAGGTCGAACTATTTTACCAGGACTAATTGATTGCCATATCCACTTGGACCTGCATGGTATGGCAGATACTTTTGAA GAAAATTTCCCAGAAGACAAAGTTAGAACTGTCAGAGCCGCTAAAGAAATGGAAAATACTCTTATGTCAGGGTTTACTAC TGTTAGAAACGTGGGATCTGTCAATTGGATTGATTTAAGTGTTAAAGAGGCGGTCAACAAAGGTTATGTGAATGGGCCCC GAATCTTGACAAGTGGCAAAATATTATCCATTACCTGTTCTGGATCCGAGTATTTCGATGGATTATACGAAGAAGTTGAC GGAGTTGACGGTTTTAGAAAAGGTACCCGAAATCAATTAAAGCTAGGAGCTGACCTGATTAAAATTATGGCAACCGGAGC TGTCATGAATCCCGGCGGCGTACCCGGAGCCCCTCAACCAGACGCAGAAGAAATGCGAGCTGCAGTTGTTGAAGCAAGAA AGTTGAACAAAAAAGTAGCCGCTCATGCTCATGGTGCTGATGGTATCAAAAATTCTGTTATAGCAGGAGTTGATACTATA GAACACGGTACTTTTGCCGATGACGAGGCAATTGAAATGATGCAAGCCAACGGAGTGTTTCTTGTTCCTACTTTAGCACC TGATTATTATATGGAGAAAAAAGGTGAAGAAAGCGGCATTGCTTCTTTCATGGTAGAAAAGTTGAGAAATAAAAAAAGGG ACAGACAAATAGCCCTGCAAAAGGCAATTGATAAAGGTGTAAAAATAGCTAATGGTTCCGATGCGGGAACTCCTTATAAT TATCAGGGGAATAATGCCAGGGAATTGACTGAGATGGTTGATAAAGGTTTTATGAGCCCTAAAAAGGCCATCACAAGCGC TACTAAGGTTGCCTCTGAAGCATGTGGGCTAGAAGACACTATTGGCAGTATTGAAAAAGGTAAAGCGGCCGATTTAATTG TGATTGCAAATGATCCACTTACAGATATCAAGGTATTACTTGATCAACAAAATATTACCATGGTCATGAAAGATGGCAAG ATAGTAAAGAATTTATTGTCTTGA
Upstream 100 bases:
>100_bases GAGTGGCGACTCCCCATCAATTTTTAATTATTGAAGTTAATTTCTAACCTAAACAATCAAGAACTAATGACAACTTACTA AGGACAAAGGAGGTAATAAA
Downstream 100 bases:
>100_bases ATAAAAGGGGTTGATGAAATTGAGTACTAACAATAAAGGGCTATCCATTTATAAATATACCGGTAGCCACGAGGAAATCG GCTATGCCTACGGAAAAGCT
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSRYLFKNARIYDGEQLWENASLLVQDGIIEDISERELVDSENEQDFEGEVYDLEGRTILPGLIDCHIHLDLHGMADTFE ENFPEDKVRTVRAAKEMENTLMSGFTTVRNVGSVNWIDLSVKEAVNKGYVNGPRILTSGKILSITCSGSEYFDGLYEEVD GVDGFRKGTRNQLKLGADLIKIMATGAVMNPGGVPGAPQPDAEEMRAAVVEARKLNKKVAAHAHGADGIKNSVIAGVDTI EHGTFADDEAIEMMQANGVFLVPTLAPDYYMEKKGEESGIASFMVEKLRNKKRDRQIALQKAIDKGVKIANGSDAGTPYN YQGNNARELTEMVDKGFMSPKKAITSATKVASEACGLEDTIGSIEKGKAADLIVIANDPLTDIKVLLDQQNITMVMKDGK IVKNLLS
Sequences:
>Translated_407_residues MSRYLFKNARIYDGEQLWENASLLVQDGIIEDISERELVDSENEQDFEGEVYDLEGRTILPGLIDCHIHLDLHGMADTFE ENFPEDKVRTVRAAKEMENTLMSGFTTVRNVGSVNWIDLSVKEAVNKGYVNGPRILTSGKILSITCSGSEYFDGLYEEVD GVDGFRKGTRNQLKLGADLIKIMATGAVMNPGGVPGAPQPDAEEMRAAVVEARKLNKKVAAHAHGADGIKNSVIAGVDTI EHGTFADDEAIEMMQANGVFLVPTLAPDYYMEKKGEESGIASFMVEKLRNKKRDRQIALQKAIDKGVKIANGSDAGTPYN YQGNNARELTEMVDKGFMSPKKAITSATKVASEACGLEDTIGSIEKGKAADLIVIANDPLTDIKVLLDQQNITMVMKDGK IVKNLLS >Mature_406_residues SRYLFKNARIYDGEQLWENASLLVQDGIIEDISERELVDSENEQDFEGEVYDLEGRTILPGLIDCHIHLDLHGMADTFEE NFPEDKVRTVRAAKEMENTLMSGFTTVRNVGSVNWIDLSVKEAVNKGYVNGPRILTSGKILSITCSGSEYFDGLYEEVDG VDGFRKGTRNQLKLGADLIKIMATGAVMNPGGVPGAPQPDAEEMRAAVVEARKLNKKVAAHAHGADGIKNSVIAGVDTIE HGTFADDEAIEMMQANGVFLVPTLAPDYYMEKKGEESGIASFMVEKLRNKKRDRQIALQKAIDKGVKIANGSDAGTPYNY QGNNARELTEMVDKGFMSPKKAITSATKVASEACGLEDTIGSIEKGKAADLIVIANDPLTDIKVLLDQQNITMVMKDGKI VKNLLS
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=339, Percent_Identity=32.4483775811209, Blast_Score=137, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 44454; Mature: 44323
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYLFKNARIYDGEQLWENASLLVQDGIIEDISERELVDSENEQDFEGEVYDLEGRTIL CCCCEECCCEEECHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEC PGLIDCHIHLDLHGMADTFEENFPEDKVRTVRAAKEMENTLMSGFTTVRNVGSVNWIDLS CCEEEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE VKEAVNKGYVNGPRILTSGKILSITCSGSEYFDGLYEEVDGVDGFRKGTRNQLKLGADLI HHHHHHCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHH KIMATGAVMNPGGVPGAPQPDAEEMRAAVVEARKLNKKVAAHAHGADGIKNSVIAGVDTI HHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHH EHGTFADDEAIEMMQANGVFLVPTLAPDYYMEKKGEESGIASFMVEKLRNKKRDRQIALQ CCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH KAIDKGVKIANGSDAGTPYNYQGNNARELTEMVDKGFMSPKKAITSATKVASEACGLEDT HHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH IGSIEKGKAADLIVIANDPLTDIKVLLDQQNITMVMKDGKIVKNLLS HCCCCCCCCCCEEEECCCCCCHHHHEECCCCEEEEEECCHHHHHHHC >Mature Secondary Structure SRYLFKNARIYDGEQLWENASLLVQDGIIEDISERELVDSENEQDFEGEVYDLEGRTIL CCCEECCCEEECHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEC PGLIDCHIHLDLHGMADTFEENFPEDKVRTVRAAKEMENTLMSGFTTVRNVGSVNWIDLS CCEEEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE VKEAVNKGYVNGPRILTSGKILSITCSGSEYFDGLYEEVDGVDGFRKGTRNQLKLGADLI HHHHHHCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHH KIMATGAVMNPGGVPGAPQPDAEEMRAAVVEARKLNKKVAAHAHGADGIKNSVIAGVDTI HHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHH EHGTFADDEAIEMMQANGVFLVPTLAPDYYMEKKGEESGIASFMVEKLRNKKRDRQIALQ CCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH KAIDKGVKIANGSDAGTPYNYQGNNARELTEMVDKGFMSPKKAITSATKVASEACGLEDT HHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH IGSIEKGKAADLIVIANDPLTDIKVLLDQQNITMVMKDGKIVKNLLS HCCCCCCCCCCEEEECCCCCCHHHHEECCCCEEEEEECCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]