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The map label for this gene is ytcJ [H]

Identifier: 188587196

GI number: 188587196

Start: 2788668

End: 2790275

Strand: Reverse

Name: ytcJ [H]

Synonym: Nther_2597

Alternate gene names: 188587196

Gene position: 2790275-2788668 (Counterclockwise)

Preceding gene: 188587197

Following gene: 188587195

Centisome position: 88.14

GC content: 43.53

Gene sequence:

>1608_bases
ATGAGTAGAAAAGTTTATTACAGTACGAGCATTTTTACTGCAGACAGTTTGAACACAATTTCCGGTGCTGTTGTAGTGGA
AGGGGAAAATATCCTTTATGTAGGAGACAAAGCCGGAGCGGAAAAATACCTGGAAGGTGCAGAAGTTGAAGATCTAGGGG
ATAAGACCATTGCTCCCGGCTTGATTGATTCTCATACACATTTTTTCCTTACAGGGCGCATGCTTACATTCAGTATCTTT
GCCGATCCCTCCTACACAGAAGAACGCATTGTTAAAGAGATGAAGGAGCTCATTAAAGAACGCCCGGGTAAACCTTTCTA
CTTCGTGTGGGGCTATGATCCTGGAACTGCAGGAAAGATAACGACTAAAAAGCTTGACGAGTATTTTGGTAAAGATACTG
CCACAGTTGCCATTGATCTAACAGGTCACGCAGGGGGTTTTTCCTCCAAGGCATTGGAACTTGCCGGCTGGGATCCAAAC
GATATCCCTGAAGGATCTGTGGTAGAGTATGAAGATGACGGTAGCGTCTCCTATATAGGAGAGACACTTTTCCTTAAATT
TTTGGCAGTACTGGTTAATGAGGCAACCGACGAAGAGATCGACATGGCAATCGATGAACTGGGTGCTCATATGAATAAAA
ACGGTTATACGAGTACCATTGAAGTCCTACCACTAGGTGGTATTGAGCTGTGGAATGAACGTAAATACAGAGAAAGAGCT
AAAGAAAAATCTCTTCCCCTTCGTATCGCCATAAACACTGCCCTGGAAGATGGCCCCTCCCAGTGGCTCAAGTTCCGAGA
CGACTGGCAGTGGGACTTCGCATTCCATGTTGGGCTCAAGGTTTTTGTAGATGGGGTTCCCCAGGGTAGCGAATCTGCAT
GGCTTGAAGAACCATATGCTTCCCGCTCTGACTGGTATGGTGAACCCTGTATTGATATGGATTATCTACGTAAAATGGTA
AAAGAAGCTAATGACATGGGCATTGGCGTCCGAGCTCACTGCACGGGAGACCGAAGCTTCAACGAGATGGTAAGAGCATT
TATGCAATCTGACAACACATATCCTGTCAATTGTATTGAACACGGCATGATGATTTCAGAGAAGTCCAAAGACTTAATTC
AAGAGTACACAAAGACAAAAACTCTAGGGGTGAATTCTCAACCAGAACTATTGGGTATTGACTCCGTTTCCAAAATCAGT
GAGATGTTTTTAGGAAAAGAACGTGCAGAAAAAATATGGCCTCACAAATCTTTGCAAGAATCTGGTGCCACAGTTTGTTT
CTCATCGGACTGTCCTAACGCATTCGGTGATATCAGTACTGTATTCCGCTATTCCGTCAATCGCTTGGCCGATGAACCCC
AAAGCCCCTATGCAAATGTTGGCCTGGGAATGCAGGAGTCCTTTTCACCTGCTGAAACCTTGATTGCTCTAACAGCCAAT
CCGGCAAAAACCATGGGTAAAGAAAATATTCTAGGTAAATTAAAACCTGGCTTTAAAGCTGATATAGCCATTTTTGACCA
AAACATTTTTGAATTGGACAAAGACGCTTATGACCAGATTGAGGTATATAAGACCGTATTGAACGGGAAAGAAGTTTATG
AGAAATAA

Upstream 100 bases:

>100_bases
GAGTCTGACTATATAAGTGGCACTGTCATCGAGGTAGGAGGTGGACTAACTTTATAGACAGAAAGTTATGTAAACTAAAA
TTATTGAAAGGGTGATAACT

Downstream 100 bases:

>100_bases
CCAATTTTATTATCCGGTCTTTTCACATTAAGAAAAGGTCGTTGGCCGTTCTCTAAAAATGAGAGCGGCTATTTTTTATT
TTCATTAGTAGCGTTTGGGA

Product: Amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSRKVYYSTSIFTADSLNTISGAVVVEGENILYVGDKAGAEKYLEGAEVEDLGDKTIAPGLIDSHTHFFLTGRMLTFSIF
ADPSYTEERIVKEMKELIKERPGKPFYFVWGYDPGTAGKITTKKLDEYFGKDTATVAIDLTGHAGGFSSKALELAGWDPN
DIPEGSVVEYEDDGSVSYIGETLFLKFLAVLVNEATDEEIDMAIDELGAHMNKNGYTSTIEVLPLGGIELWNERKYRERA
KEKSLPLRIAINTALEDGPSQWLKFRDDWQWDFAFHVGLKVFVDGVPQGSESAWLEEPYASRSDWYGEPCIDMDYLRKMV
KEANDMGIGVRAHCTGDRSFNEMVRAFMQSDNTYPVNCIEHGMMISEKSKDLIQEYTKTKTLGVNSQPELLGIDSVSKIS
EMFLGKERAEKIWPHKSLQESGATVCFSSDCPNAFGDISTVFRYSVNRLADEPQSPYANVGLGMQESFSPAETLIALTAN
PAKTMGKENILGKLKPGFKADIAIFDQNIFELDKDAYDQIEVYKTVLNGKEVYEK

Sequences:

>Translated_535_residues
MSRKVYYSTSIFTADSLNTISGAVVVEGENILYVGDKAGAEKYLEGAEVEDLGDKTIAPGLIDSHTHFFLTGRMLTFSIF
ADPSYTEERIVKEMKELIKERPGKPFYFVWGYDPGTAGKITTKKLDEYFGKDTATVAIDLTGHAGGFSSKALELAGWDPN
DIPEGSVVEYEDDGSVSYIGETLFLKFLAVLVNEATDEEIDMAIDELGAHMNKNGYTSTIEVLPLGGIELWNERKYRERA
KEKSLPLRIAINTALEDGPSQWLKFRDDWQWDFAFHVGLKVFVDGVPQGSESAWLEEPYASRSDWYGEPCIDMDYLRKMV
KEANDMGIGVRAHCTGDRSFNEMVRAFMQSDNTYPVNCIEHGMMISEKSKDLIQEYTKTKTLGVNSQPELLGIDSVSKIS
EMFLGKERAEKIWPHKSLQESGATVCFSSDCPNAFGDISTVFRYSVNRLADEPQSPYANVGLGMQESFSPAETLIALTAN
PAKTMGKENILGKLKPGFKADIAIFDQNIFELDKDAYDQIEVYKTVLNGKEVYEK
>Mature_534_residues
SRKVYYSTSIFTADSLNTISGAVVVEGENILYVGDKAGAEKYLEGAEVEDLGDKTIAPGLIDSHTHFFLTGRMLTFSIFA
DPSYTEERIVKEMKELIKERPGKPFYFVWGYDPGTAGKITTKKLDEYFGKDTATVAIDLTGHAGGFSSKALELAGWDPND
IPEGSVVEYEDDGSVSYIGETLFLKFLAVLVNEATDEEIDMAIDELGAHMNKNGYTSTIEVLPLGGIELWNERKYRERAK
EKSLPLRIAINTALEDGPSQWLKFRDDWQWDFAFHVGLKVFVDGVPQGSESAWLEEPYASRSDWYGEPCIDMDYLRKMVK
EANDMGIGVRAHCTGDRSFNEMVRAFMQSDNTYPVNCIEHGMMISEKSKDLIQEYTKTKTLGVNSQPELLGIDSVSKISE
MFLGKERAEKIWPHKSLQESGATVCFSSDCPNAFGDISTVFRYSVNRLADEPQSPYANVGLGMQESFSPAETLIALTANP
AKTMGKENILGKLKPGFKADIAIFDQNIFELDKDAYDQIEVYKTVLNGKEVYEK

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59739; Mature: 59608

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKVYYSTSIFTADSLNTISGAVVVEGENILYVGDKAGAEKYLEGAEVEDLGDKTIAPG
CCCEEEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCHHHHHCCCCHHHCCCCCCCCC
LIDSHTHFFLTGRMLTFSIFADPSYTEERIVKEMKELIKERPGKPFYFVWGYDPGTAGKI
CCCCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
TTKKLDEYFGKDTATVAIDLTGHAGGFSSKALELAGWDPNDIPEGSVVEYEDDGSVSYIG
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHH
ETLFLKFLAVLVNEATDEEIDMAIDELGAHMNKNGYTSTIEVLPLGGIELWNERKYRERA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCHHHHHHH
KEKSLPLRIAINTALEDGPSQWLKFRDDWQWDFAFHVGLKVFVDGVPQGSESAWLEEPYA
HHCCCCEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCC
SRSDWYGEPCIDMDYLRKMVKEANDMGIGVRAHCTGDRSFNEMVRAFMQSDNTYPVNCIE
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHH
HGMMISEKSKDLIQEYTKTKTLGVNSQPELLGIDSVSKISEMFLGKERAEKIWPHKSLQE
CCCEECHHHHHHHHHHHHHHEECCCCCCCEECCCHHHHHHHHHHCHHHHHHHCCCHHHHH
SGATVCFSSDCPNAFGDISTVFRYSVNRLADEPQSPYANVGLGMQESFSPAETLIALTAN
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEEEEEECC
PAKTMGKENILGKLKPGFKADIAIFDQNIFELDKDAYDQIEVYKTVLNGKEVYEK
CHHHCCCHHHHHCCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure 
SRKVYYSTSIFTADSLNTISGAVVVEGENILYVGDKAGAEKYLEGAEVEDLGDKTIAPG
CCEEEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCHHHHHCCCCHHHCCCCCCCCC
LIDSHTHFFLTGRMLTFSIFADPSYTEERIVKEMKELIKERPGKPFYFVWGYDPGTAGKI
CCCCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
TTKKLDEYFGKDTATVAIDLTGHAGGFSSKALELAGWDPNDIPEGSVVEYEDDGSVSYIG
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHH
ETLFLKFLAVLVNEATDEEIDMAIDELGAHMNKNGYTSTIEVLPLGGIELWNERKYRERA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCHHHHHHH
KEKSLPLRIAINTALEDGPSQWLKFRDDWQWDFAFHVGLKVFVDGVPQGSESAWLEEPYA
HHCCCCEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCC
SRSDWYGEPCIDMDYLRKMVKEANDMGIGVRAHCTGDRSFNEMVRAFMQSDNTYPVNCIE
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHH
HGMMISEKSKDLIQEYTKTKTLGVNSQPELLGIDSVSKISEMFLGKERAEKIWPHKSLQE
CCCEECHHHHHHHHHHHHHHEECCCCCCCEECCCHHHHHHHHHHCHHHHHHHCCCHHHHH
SGATVCFSSDCPNAFGDISTVFRYSVNRLADEPQSPYANVGLGMQESFSPAETLIALTAN
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEEEEEECC
PAKTMGKENILGKLKPGFKADIAIFDQNIFELDKDAYDQIEVYKTVLNGKEVYEK
CHHHCCCHHHHHCCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]