| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587195
Identifier: 188587195
GI number: 188587195
Start: 2787760
End: 2788437
Strand: Reverse
Name: 188587195
Synonym: Nther_2596
Alternate gene names: NA
Gene position: 2788437-2787760 (Counterclockwise)
Preceding gene: 188587196
Following gene: 188587194
Centisome position: 88.09
GC content: 31.42
Gene sequence:
>678_bases ATGCCCAATCTGAAAGCTTTTTTACAAGATTCTCATGCCAGTTTTACAGTAACAGATGATGAAATCTTTATGGAAAATCA CATTTTAACCAGACCAGTCCAACAAGCTCATATTTTATCTTTAATTTTTATTTTAATTCAGGGAGTATTAATATCTTTTA CAATTGAGTATTTAAAGGCCTCAGCCTTGGATATTTTCTTAGGTAATTTATTAGGTGGCAACATGGTAACTGGTATGCTA GACACAAGCTTCCAATTCGGAGATTTTGTTGTTGGAGCCATTGTATATTCTATTGTTTTGCTATTATTTTGGTTAATATT TATGGGTGGAGTTTATTTCATTATCGGAAAAACCGTTGGAGTTAATCTTTCTTTTGATGTACTTCAAAAATATCTGCCTG TTTTAACAGCAGCAACGGCATTTGGCATGGTCTTTCTAGCTGTTAATTCTTTACTCTCTACTTTTGTTATTAAAATTTCA TTATTTAATATGCTGTGTTCACTTCTTGTTCCTTTTTTATTGAATATGTACTTACTAACTAGATTCTTTGCCTACAATGT GAAGGCTTTTGATGATGAATTCAGTGTTAGTCCTGTGTACTATTCTAATATGTTGTCCTTAATTGCTATGGGTATTTATG GGTTTGTTAAAATTTTATTTGCAGTGGCATGGATATAA
Upstream 100 bases:
>100_bases ATTATGCAGGAGAATTTAACTATTTGTTGAAACGGAATTAAATGTGACCTATTTTCCCTTAATACTAATATTTAACAAAA TTAAAGGAGGTCTTAAAAAA
Downstream 100 bases:
>100_bases TTTAAAAGTAATGGGTTTGTTTATGGTTTTGGCAATTATCTCAGAATTTAGTTAAAATGACATGGAAAATCACATATTAC ATAAAAAATGGCCGTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MPNLKAFLQDSHASFTVTDDEIFMENHILTRPVQQAHILSLIFILIQGVLISFTIEYLKASALDIFLGNLLGGNMVTGML DTSFQFGDFVVGAIVYSIVLLLFWLIFMGGVYFIIGKTVGVNLSFDVLQKYLPVLTAATAFGMVFLAVNSLLSTFVIKIS LFNMLCSLLVPFLLNMYLLTRFFAYNVKAFDDEFSVSPVYYSNMLSLIAMGIYGFVKILFAVAWI
Sequences:
>Translated_225_residues MPNLKAFLQDSHASFTVTDDEIFMENHILTRPVQQAHILSLIFILIQGVLISFTIEYLKASALDIFLGNLLGGNMVTGML DTSFQFGDFVVGAIVYSIVLLLFWLIFMGGVYFIIGKTVGVNLSFDVLQKYLPVLTAATAFGMVFLAVNSLLSTFVIKIS LFNMLCSLLVPFLLNMYLLTRFFAYNVKAFDDEFSVSPVYYSNMLSLIAMGIYGFVKILFAVAWI >Mature_224_residues PNLKAFLQDSHASFTVTDDEIFMENHILTRPVQQAHILSLIFILIQGVLISFTIEYLKASALDIFLGNLLGGNMVTGMLD TSFQFGDFVVGAIVYSIVLLLFWLIFMGGVYFIIGKTVGVNLSFDVLQKYLPVLTAATAFGMVFLAVNSLLSTFVIKISL FNMLCSLLVPFLLNMYLLTRFFAYNVKAFDDEFSVSPVYYSNMLSLIAMGIYGFVKILFAVAWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25150; Mature: 25019
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLKAFLQDSHASFTVTDDEIFMENHILTRPVQQAHILSLIFILIQGVLISFTIEYLKA CCCHHHHHHCCCCEEEECCHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALDIFLGNLLGGNMVTGMLDTSFQFGDFVVGAIVYSIVLLLFWLIFMGGVYFIIGKTVG HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VNLSFDVLQKYLPVLTAATAFGMVFLAVNSLLSTFVIKISLFNMLCSLLVPFLLNMYLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFFAYNVKAFDDEFSVSPVYYSNMLSLIAMGIYGFVKILFAVAWI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNLKAFLQDSHASFTVTDDEIFMENHILTRPVQQAHILSLIFILIQGVLISFTIEYLKA CCHHHHHHCCCCEEEECCHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALDIFLGNLLGGNMVTGMLDTSFQFGDFVVGAIVYSIVLLLFWLIFMGGVYFIIGKTVG HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VNLSFDVLQKYLPVLTAATAFGMVFLAVNSLLSTFVIKISLFNMLCSLLVPFLLNMYLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFFAYNVKAFDDEFSVSPVYYSNMLSLIAMGIYGFVKILFAVAWI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA