Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

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The map label for this gene is 188587182

Identifier: 188587182

GI number: 188587182

Start: 2770195

End: 2770806

Strand: Reverse

Name: 188587182

Synonym: Nther_2581

Alternate gene names: NA

Gene position: 2770806-2770195 (Counterclockwise)

Preceding gene: 188587184

Following gene: 188587180

Centisome position: 87.53

GC content: 36.11

Gene sequence:

>612_bases
TTGAATTTTAAAAAAGGTTTGTTGGTTGTGATAGTATCTGTTTTGTCTCTGTATTTTGTTAGTGGTTGCAACCAGCAGAG
TTCTGGGATAGGAGAACCTGAAGAAAATCTTACTATAGAGCCGGCGGAACTATCCTTTGAAGCCGAGCGTGCAATTGTTC
CCCTTGGTGATCATACCTGGATATATGATTATAATTTCGTAGAAGGCGAGAATTTTGGAATTGAGCTTGAGCATTACAAG
GATGGGAACTTGGAAGATAGTCAAACTGTTTTAAATGTCAGTTCAGAAGATACAGGTAATATCACTATCAATAGAAAAGG
TGAAGAATGGAAATTTGCGGCCATTCATGGACAAACATCAGAAGAAGTTACGTGGAATGGAAAAACAATTGAAATCGAAC
TACCTGAACACCAAAACCCTTCAACAAACTTTATAGGACTAGAAGAGGGAATAGAGATAAGTGATGACAAAAATATCATA
GCAGGAGCGGTTATTGCTAATGCCGAGGGAGTAGATAAGTATTCAGATATTAAAGATATCAACGATAAAGAAACCAGAGA
AAAAGTTATAGAAGAATACAACCATGTATATTTGATAAGAATTGCTAACTAA

Upstream 100 bases:

>100_bases
GCACATGTCAAATTTTGTCAAATGGTCACCTTGTGTTAAAATCAAATATAATAAAGTTTAAAGGGTTTTTTGTCTTATAG
AAAACTGGAGGTGGCTTAAA

Downstream 100 bases:

>100_bases
AGTTTTTTCTAACCTCCGAACTTCATATATATTTTCTCTAGCACAAATAAAGCAGGGCTTATAATCCCAAAGAATCCCCA
GAAAAACATAGAAGCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNFKKGLLVVIVSVLSLYFVSGCNQQSSGIGEPEENLTIEPAELSFEAERAIVPLGDHTWIYDYNFVEGENFGIELEHYK
DGNLEDSQTVLNVSSEDTGNITINRKGEEWKFAAIHGQTSEEVTWNGKTIEIELPEHQNPSTNFIGLEEGIEISDDKNII
AGAVIANAEGVDKYSDIKDINDKETREKVIEEYNHVYLIRIAN

Sequences:

>Translated_203_residues
MNFKKGLLVVIVSVLSLYFVSGCNQQSSGIGEPEENLTIEPAELSFEAERAIVPLGDHTWIYDYNFVEGENFGIELEHYK
DGNLEDSQTVLNVSSEDTGNITINRKGEEWKFAAIHGQTSEEVTWNGKTIEIELPEHQNPSTNFIGLEEGIEISDDKNII
AGAVIANAEGVDKYSDIKDINDKETREKVIEEYNHVYLIRIAN
>Mature_203_residues
MNFKKGLLVVIVSVLSLYFVSGCNQQSSGIGEPEENLTIEPAELSFEAERAIVPLGDHTWIYDYNFVEGENFGIELEHYK
DGNLEDSQTVLNVSSEDTGNITINRKGEEWKFAAIHGQTSEEVTWNGKTIEIELPEHQNPSTNFIGLEEGIEISDDKNII
AGAVIANAEGVDKYSDIKDINDKETREKVIEEYNHVYLIRIAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22766; Mature: 22766

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKKGLLVVIVSVLSLYFVSGCNQQSSGIGEPEENLTIEPAELSFEAERAIVPLGDHTW
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHCCEECCEEEEECCCCEE
IYDYNFVEGENFGIELEHYKDGNLEDSQTVLNVSSEDTGNITINRKGEEWKFAAIHGQTS
EEEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCC
EEVTWNGKTIEIELPEHQNPSTNFIGLEEGIEISDDKNIIAGAVIANAEGVDKYSDIKDI
CEEEECCCEEEEECCCCCCCCCCEEECCCCCEECCCCCEEEEEEEECCCCCCCHHHHCCC
NDKETREKVIEEYNHVYLIRIAN
CCHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MNFKKGLLVVIVSVLSLYFVSGCNQQSSGIGEPEENLTIEPAELSFEAERAIVPLGDHTW
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHCCEECCEEEEECCCCEE
IYDYNFVEGENFGIELEHYKDGNLEDSQTVLNVSSEDTGNITINRKGEEWKFAAIHGQTS
EEEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCC
EEVTWNGKTIEIELPEHQNPSTNFIGLEEGIEISDDKNIIAGAVIANAEGVDKYSDIKDI
CEEEECCCEEEEECCCCCCCCCCEEECCCCCEECCCCCEEEEEEEECCCCCCCHHHHCCC
NDKETREKVIEEYNHVYLIRIAN
CCHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA