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The map label for this gene is tsr [C]

Identifier: 188587180

GI number: 188587180

Start: 2767015

End: 2769051

Strand: Reverse

Name: tsr [C]

Synonym: Nther_2579

Alternate gene names: 188587180

Gene position: 2769051-2767015 (Counterclockwise)

Preceding gene: 188587182

Following gene: 188587179

Centisome position: 87.47

GC content: 31.57

Gene sequence:

>2037_bases
ATGGGAAATTCTTTAAATAAGAAAATTTTAATGCTTATGTTATTAATATCAGTGGTCGTTTTTTCTCTACAAATTTATTT
TATTATTGGATCTTATCGAGAAGATTTAAGTAGTGAAGCAGAATCGCACTTAATATCCAGGATCGAACAAGAAACAGAAA
ACATGAACTCTGACTTTTTGAGAATAGACCAAAGTGCTAAAGGCTTGAGTTCTTTAATTGCAAAAAGTCGTGATACTGAT
ATGAATTTAGATTATATAAAAGATTTTATTACTGAAATTGACCTTGTCATGGGTTCTGGTTTTTGGATGGAGCCTTATCA
ATATGAAGAAGACGAAGAATTCTATGGTCCATATGTTCATCAAGAAGAAAGTGAAGTTTTAGTAACTTGGGAATATAGTA
ATGAAGAATATGATTATTTCACTCATGATTGGTATGAAGCTGGAAGAGATAGTGGAGAATCAGTTTGGACTGAACCTTAT
TATGATGAAGTTTCAGATATTACAATGATGACCTATTCAACACCAATTTTTTCAGATGATGAAATAATAGGTGTTACTTC
TATTGACATTAATTTAGAAGGTTTACAAAGTTACGTTGAAAATATTAGTATCGGAGATAATGGAGAAGCCTATTTAATAG
CTGATAATGGCAATTTTATAGTAAACCCTCATATAGACGAGCCCGGAATTAACATTGAAGATCAGGAAATGAGTAGTCTA
ACTGATGTTGCTTCAGATATATTGTCAGCTGAAGGTGATCAGTTAAATACTGCTATGATTAATGAAAGCGAACATTTCGT
TTCTCATGCAGATATAGGAGATACAGGTTTAAAATTGATTTTGACTCTTCCAACTGAAGAATTAGGCATTCAAAATCAAG
TATACTATCTAATTATTATATCTGTTATTAGCATTTTTGCTTTTTTGCTAATTTTATATTTTATGATTAAAAATTTAGTA
ATCAATCCTATTAACGAGACTAAAGACTTTACTGCAGTGATTGCCGAAGGCGATTTTACTAAAGAGATTTCTCAAAAATA
TATCAATAGAAAAGATGAAATTGGAGATTTAGCTAGTAATTTTGATTCTATGCAGAAGAATCTAAAAGATATTATTACCA
ATATAATGAGTGTTGCAGATAACCTTGCTACTTCTAGTGAAGAGTTATCGGCTTCTAGTGAAGAAATTTCTACTTCCACA
GAGGATATGGGTAAATCTGTACAAGAAATTGCTTCTGGTGCTGAAGAACAGTCTGCTCAAGTGGAGGAAACTAAAAGCAA
TGTAGATAGTCTAAAAAATGAAATAGATGATATAGGATACAAATCCACAAAAATGAATAAACAAGCTAATAACGTGATTG
AAAACATAGAATTGGGAAATGAGTCGATAAATAACTCTATTAATCAGGTTAAAGATGTAAAAAATAGAACTCTTGGAGTT
ACAGAGCAAATTAACAAATTAGGCGAACTTTCAAAAAAAATAGGAGAGATAACTGATATAATAAACGACATCTCATCTCA
AACAAATTTATTGGCCTTAAATGCTGCAATTGAAGCCGCCCGTGCGGGAGAAGCTGGCCAAGGGTTTAGTGTAGTAGCTG
AGGAAATAAGGAAGTTAGCTGAAGAAACATCCAATTCTACAGAACAAATTACCAGCTTGATTAATGAGATACAAGAAGGA
GTTCAAAAGACAGTTGCTGAAGTTGACGATACCAATAATTCCGTTGATAATAGTGTTTCTGTGATTGAATCCACTGCAGA
CAATTTTTATAAAACCAATCAGGAAATGGAGAACTTAAGTCAATATATTAAAGAAATTTCATTAGGAGTAAATACTATGA
ATGAAAATAGTGAATTTGTTATTAATGCAGTTAATGAAATTTCTCAAGTAAGCCAAGAAGCAGCACAATATGCAGAAAAT
GTTGCTACAGCTACTAAAGAACAAGGTCATTCCACAAATGAAATCGTTGAAGCAACATCTGAACTTGCAGAAATGGCGGA
AAAACTAAATGATATAGTGAATCAGTTTAAGATTTAA

Upstream 100 bases:

>100_bases
GGGTTTTGATTTCTGTCTAAAACTATCTTAACTCCGGGACGGAGACTGATTAAATATCATATAACTTAACAGAACTAAAC
ATAGAGAAAGGGGATTATAT

Downstream 100 bases:

>100_bases
TTATCAATTGGGAATTTAACTTTTACCAAAGGGAGTGTCGTATTCTTTTAGCTATGACAAAAAAACCAGGATTAACATCA
CGTTTAGATCAAAGTTTACT

Product: methyl-accepting chemotaxis sensory transducer with Cache sensor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 677

Protein sequence:

>678_residues
MGNSLNKKILMLMLLISVVVFSLQIYFIIGSYREDLSSEAESHLISRIEQETENMNSDFLRIDQSAKGLSSLIAKSRDTD
MNLDYIKDFITEIDLVMGSGFWMEPYQYEEDEEFYGPYVHQEESEVLVTWEYSNEEYDYFTHDWYEAGRDSGESVWTEPY
YDEVSDITMMTYSTPIFSDDEIIGVTSIDINLEGLQSYVENISIGDNGEAYLIADNGNFIVNPHIDEPGINIEDQEMSSL
TDVASDILSAEGDQLNTAMINESEHFVSHADIGDTGLKLILTLPTEELGIQNQVYYLIIISVISIFAFLLILYFMIKNLV
INPINETKDFTAVIAEGDFTKEISQKYINRKDEIGDLASNFDSMQKNLKDIITNIMSVADNLATSSEELSASSEEISTST
EDMGKSVQEIASGAEEQSAQVEETKSNVDSLKNEIDDIGYKSTKMNKQANNVIENIELGNESINNSINQVKDVKNRTLGV
TEQINKLGELSKKIGEITDIINDISSQTNLLALNAAIEAARAGEAGQGFSVVAEEIRKLAEETSNSTEQITSLINEIQEG
VQKTVAEVDDTNNSVDNSVSVIESTADNFYKTNQEMENLSQYIKEISLGVNTMNENSEFVINAVNEISQVSQEAAQYAEN
VATATKEQGHSTNEIVEATSELAEMAEKLNDIVNQFKI

Sequences:

>Translated_678_residues
MGNSLNKKILMLMLLISVVVFSLQIYFIIGSYREDLSSEAESHLISRIEQETENMNSDFLRIDQSAKGLSSLIAKSRDTD
MNLDYIKDFITEIDLVMGSGFWMEPYQYEEDEEFYGPYVHQEESEVLVTWEYSNEEYDYFTHDWYEAGRDSGESVWTEPY
YDEVSDITMMTYSTPIFSDDEIIGVTSIDINLEGLQSYVENISIGDNGEAYLIADNGNFIVNPHIDEPGINIEDQEMSSL
TDVASDILSAEGDQLNTAMINESEHFVSHADIGDTGLKLILTLPTEELGIQNQVYYLIIISVISIFAFLLILYFMIKNLV
INPINETKDFTAVIAEGDFTKEISQKYINRKDEIGDLASNFDSMQKNLKDIITNIMSVADNLATSSEELSASSEEISTST
EDMGKSVQEIASGAEEQSAQVEETKSNVDSLKNEIDDIGYKSTKMNKQANNVIENIELGNESINNSINQVKDVKNRTLGV
TEQINKLGELSKKIGEITDIINDISSQTNLLALNAAIEAARAGEAGQGFSVVAEEIRKLAEETSNSTEQITSLINEIQEG
VQKTVAEVDDTNNSVDNSVSVIESTADNFYKTNQEMENLSQYIKEISLGVNTMNENSEFVINAVNEISQVSQEAAQYAEN
VATATKEQGHSTNEIVEATSELAEMAEKLNDIVNQFKI
>Mature_677_residues
GNSLNKKILMLMLLISVVVFSLQIYFIIGSYREDLSSEAESHLISRIEQETENMNSDFLRIDQSAKGLSSLIAKSRDTDM
NLDYIKDFITEIDLVMGSGFWMEPYQYEEDEEFYGPYVHQEESEVLVTWEYSNEEYDYFTHDWYEAGRDSGESVWTEPYY
DEVSDITMMTYSTPIFSDDEIIGVTSIDINLEGLQSYVENISIGDNGEAYLIADNGNFIVNPHIDEPGINIEDQEMSSLT
DVASDILSAEGDQLNTAMINESEHFVSHADIGDTGLKLILTLPTEELGIQNQVYYLIIISVISIFAFLLILYFMIKNLVI
NPINETKDFTAVIAEGDFTKEISQKYINRKDEIGDLASNFDSMQKNLKDIITNIMSVADNLATSSEELSASSEEISTSTE
DMGKSVQEIASGAEEQSAQVEETKSNVDSLKNEIDDIGYKSTKMNKQANNVIENIELGNESINNSINQVKDVKNRTLGVT
EQINKLGELSKKIGEITDIINDISSQTNLLALNAAIEAARAGEAGQGFSVVAEEIRKLAEETSNSTEQITSLINEIQEGV
QKTVAEVDDTNNSVDNSVSVIESTADNFYKTNQEMENLSQYIKEISLGVNTMNENSEFVINAVNEISQVSQEAAQYAENV
ATATKEQGHSTNEIVEATSELAEMAEKLNDIVNQFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=342, Percent_Identity=25.7309941520468, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787690, Length=415, Percent_Identity=26.2650602409639, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1788195, Length=303, Percent_Identity=26.4026402640264, Blast_Score=122, Evalue=8e-29,
Organism=Escherichia coli, GI1788194, Length=356, Percent_Identity=25.561797752809, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1789453, Length=371, Percent_Identity=24.2587601078167, Blast_Score=106, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 75580; Mature: 75449

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSLNKKILMLMLLISVVVFSLQIYFIIGSYREDLSSEAESHLISRIEQETENMNSDFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE
RIDQSAKGLSSLIAKSRDTDMNLDYIKDFITEIDLVMGSGFWMEPYQYEEDEEFYGPYVH
ECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCC
QEESEVLVTWEYSNEEYDYFTHDWYEAGRDSGESVWTEPYYDEVSDITMMTYSTPIFSDD
CCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCEEEEEECCCCCCCC
EIIGVTSIDINLEGLQSYVENISIGDNGEAYLIADNGNFIVNPHIDEPGINIEDQEMSSL
CEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHH
TDVASDILSAEGDQLNTAMINESEHFVSHADIGDTGLKLILTLPTEELGIQNQVYYLIII
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEECCCHHHCCCCHHHHHHHH
SVISIFAFLLILYFMIKNLVINPINETKDFTAVIAEGDFTKEISQKYINRKDEIGDLASN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHH
FDSMQKNLKDIITNIMSVADNLATSSEELSASSEEISTSTEDMGKSVQEIASGAEEQSAQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHH
VEETKSNVDSLKNEIDDIGYKSTKMNKQANNVIENIELGNESINNSINQVKDVKNRTLGV
HHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH
TEQINKLGELSKKIGEITDIINDISSQTNLLALNAAIEAARAGEAGQGFSVVAEEIRKLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EETSNSTEQITSLINEIQEGVQKTVAEVDDTNNSVDNSVSVIESTADNFYKTNQEMENLS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QYIKEISLGVNTMNENSEFVINAVNEISQVSQEAAQYAENVATATKEQGHSTNEIVEATS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ELAEMAEKLNDIVNQFKI
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNSLNKKILMLMLLISVVVFSLQIYFIIGSYREDLSSEAESHLISRIEQETENMNSDFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE
RIDQSAKGLSSLIAKSRDTDMNLDYIKDFITEIDLVMGSGFWMEPYQYEEDEEFYGPYVH
ECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCC
QEESEVLVTWEYSNEEYDYFTHDWYEAGRDSGESVWTEPYYDEVSDITMMTYSTPIFSDD
CCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCEEEEEECCCCCCCC
EIIGVTSIDINLEGLQSYVENISIGDNGEAYLIADNGNFIVNPHIDEPGINIEDQEMSSL
CEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHH
TDVASDILSAEGDQLNTAMINESEHFVSHADIGDTGLKLILTLPTEELGIQNQVYYLIII
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEECCCHHHCCCCHHHHHHHH
SVISIFAFLLILYFMIKNLVINPINETKDFTAVIAEGDFTKEISQKYINRKDEIGDLASN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHH
FDSMQKNLKDIITNIMSVADNLATSSEELSASSEEISTSTEDMGKSVQEIASGAEEQSAQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHH
VEETKSNVDSLKNEIDDIGYKSTKMNKQANNVIENIELGNESINNSINQVKDVKNRTLGV
HHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH
TEQINKLGELSKKIGEITDIINDISSQTNLLALNAAIEAARAGEAGQGFSVVAEEIRKLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EETSNSTEQITSLINEIQEGVQKTVAEVDDTNNSVDNSVSVIESTADNFYKTNQEMENLS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QYIKEISLGVNTMNENSEFVINAVNEISQVSQEAAQYAENVATATKEQGHSTNEIVEATS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ELAEMAEKLNDIVNQFKI
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA