| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yeiH [C]
Identifier: 188587179
GI number: 188587179
Start: 2765828
End: 2766961
Strand: Reverse
Name: yeiH [C]
Synonym: Nther_2578
Alternate gene names: 188587179
Gene position: 2766961-2765828 (Counterclockwise)
Preceding gene: 188587180
Following gene: 188587178
Centisome position: 87.41
GC content: 38.1
Gene sequence:
>1134_bases ATGACAAAAAAACCAGGATTAACATCACGTTTAGATCAAAGTTTACTTCAAAGCTTAGGTCCAGGTTTAGGATTTGTATT TATAATTGCTTTGTTTTCGCTATTTGTTAATTTTTTATATGATCCAGTAAGTTCGGTGATAGTTGCACTTTTAATTGGAC TTCTTTTGAGCAATCTGTGTTCTATCCCAGAAAGCATTAATCCAGGAAGTGATTTTGCTGCTAAAAAGCTTTTAAAACTG GGGATAATTTTAATGGGGGTTAGGCTCAGTTTTTTTGAGATAATTGAGCTCGGAAGTTTATCTCTACTTATAATCATAGT ATGTATATTACTTGCACTTACATTAGTTACACAACTATCTAAAAAATTTGGCGTACCATATAATCTGGCCATCTTAATAG CAATAGGAACGGCCATCTGCGGAAATAGTGCCATTGTGGCTAGCTCACCAATTATTAAGGCCAAGGATGAGGAAGTAGCT TTTTCTGTTGCCACTATTACGACTTTTGGCTTGAGTGCTATAGTTATCTATCCTCTCATTGGGATGATGCTAGGGATGAG CTCTTTGGAGTTCGGAACCTGGGCAGGAACGGCCATAAATGACACGGGCCAAGTGGTGGCTGCTGCCTTCTCATTTAGTG AGTCTGCTGGAGAAGTCGCCACAGTTATCAAGTTGACCAGGAATATATTTATTGCTCCCTTGTTATTATATCTGTCTTAT ATAAGCAGCAGAGATATCAGAGACGGTGAAAGAGAATGTGAAAGAGACGGTGAAAGAGAAAGTGAGAGGGTAGGTGAAAG TGAATGTAAAAAAGAAAGTGAATGTAAAAAAGAAAGTGAAAGTAAATGTGAGGGAGTTGGGGAAGGAGAAAATCATGGGA ATGAGCAAGCCAGTAAGCGGGTTAGCTTTATAAAAGTCTTTCCCTGGTTTGTTATCGGTTTTTTGGTCATGGTAGCCCTC AGGACTGTAGATATATTTCCTCAGCTTGGAATCGATATTTTGAGTAATCTATCCAATTTATTGATTGTTATGGCCCTTGC CGGTATAGGGCTGGGGATAAATTTATCATCTTTAAAAGAACTTGGAATTAAAGCATTTTTGACAGGTCTACTTGCATCTG TGATTATGGGTTGA
Upstream 100 bases:
>100_bases AAATGGCGGAAAAACTAAATGATATAGTGAATCAGTTTAAGATTTAATTATCAATTGGGAATTTAACTTTTACCAAAGGG AGTGTCGTATTCTTTTAGCT
Downstream 100 bases:
>100_bases ACCAGTCTTATTTTGGTATTATGGATGATTTAACTATAAATAAACAACTTTCTGTAGATAAAATAAAGCAACTAATTGAT GAAGCATCTGATATTGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTKKPGLTSRLDQSLLQSLGPGLGFVFIIALFSLFVNFLYDPVSSVIVALLIGLLLSNLCSIPESINPGSDFAAKKLLKL GIILMGVRLSFFEIIELGSLSLLIIIVCILLALTLVTQLSKKFGVPYNLAILIAIGTAICGNSAIVASSPIIKAKDEEVA FSVATITTFGLSAIVIYPLIGMMLGMSSLEFGTWAGTAINDTGQVVAAAFSFSESAGEVATVIKLTRNIFIAPLLLYLSY ISSRDIRDGERECERDGERESERVGESECKKESECKKESESKCEGVGEGENHGNEQASKRVSFIKVFPWFVIGFLVMVAL RTVDIFPQLGIDILSNLSNLLIVMALAGIGLGINLSSLKELGIKAFLTGLLASVIMG
Sequences:
>Translated_377_residues MTKKPGLTSRLDQSLLQSLGPGLGFVFIIALFSLFVNFLYDPVSSVIVALLIGLLLSNLCSIPESINPGSDFAAKKLLKL GIILMGVRLSFFEIIELGSLSLLIIIVCILLALTLVTQLSKKFGVPYNLAILIAIGTAICGNSAIVASSPIIKAKDEEVA FSVATITTFGLSAIVIYPLIGMMLGMSSLEFGTWAGTAINDTGQVVAAAFSFSESAGEVATVIKLTRNIFIAPLLLYLSY ISSRDIRDGERECERDGERESERVGESECKKESECKKESESKCEGVGEGENHGNEQASKRVSFIKVFPWFVIGFLVMVAL RTVDIFPQLGIDILSNLSNLLIVMALAGIGLGINLSSLKELGIKAFLTGLLASVIMG >Mature_376_residues TKKPGLTSRLDQSLLQSLGPGLGFVFIIALFSLFVNFLYDPVSSVIVALLIGLLLSNLCSIPESINPGSDFAAKKLLKLG IILMGVRLSFFEIIELGSLSLLIIIVCILLALTLVTQLSKKFGVPYNLAILIAIGTAICGNSAIVASSPIIKAKDEEVAF SVATITTFGLSAIVIYPLIGMMLGMSSLEFGTWAGTAINDTGQVVAAAFSFSESAGEVATVIKLTRNIFIAPLLLYLSYI SSRDIRDGERECERDGERESERVGESECKKESECKKESESKCEGVGEGENHGNEQASKRVSFIKVFPWFVIGFLVMVALR TVDIFPQLGIDILSNLSNLLIVMALAGIGLGINLSSLKELGIKAFLTGLLASVIMG
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=333, Percent_Identity=29.1291291291291, Blast_Score=122, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 40327; Mature: 40196
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKPGLTSRLDQSLLQSLGPGLGFVFIIALFSLFVNFLYDPVSSVIVALLIGLLLSNLC CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIPESINPGSDFAAKKLLKLGIILMGVRLSFFEIIELGSLSLLIIIVCILLALTLVTQLS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KKFGVPYNLAILIAIGTAICGNSAIVASSPIIKAKDEEVAFSVATITTFGLSAIVIYPLI HHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GMMLGMSSLEFGTWAGTAINDTGQVVAAAFSFSESAGEVATVIKLTRNIFIAPLLLYLSY HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ISSRDIRDGERECERDGERESERVGESECKKESECKKESESKCEGVGEGENHGNEQASKR HHCCCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH VSFIKVFPWFVIGFLVMVALRTVDIFPQLGIDILSNLSNLLIVMALAGIGLGINLSSLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGIKAFLTGLLASVIMG HHHHHHHHHHHHHHHCC >Mature Secondary Structure TKKPGLTSRLDQSLLQSLGPGLGFVFIIALFSLFVNFLYDPVSSVIVALLIGLLLSNLC CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIPESINPGSDFAAKKLLKLGIILMGVRLSFFEIIELGSLSLLIIIVCILLALTLVTQLS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH KKFGVPYNLAILIAIGTAICGNSAIVASSPIIKAKDEEVAFSVATITTFGLSAIVIYPLI HHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GMMLGMSSLEFGTWAGTAINDTGQVVAAAFSFSESAGEVATVIKLTRNIFIAPLLLYLSY HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ISSRDIRDGERECERDGERESERVGESECKKESECKKESESKCEGVGEGENHGNEQASKR HHCCCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH VSFIKVFPWFVIGFLVMVALRTVDIFPQLGIDILSNLSNLLIVMALAGIGLGINLSSLKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGIKAFLTGLLASVIMG HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]