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The map label for this gene is 188587176

Identifier: 188587176

GI number: 188587176

Start: 2764108

End: 2764698

Strand: Direct

Name: 188587176

Synonym: Nther_2575

Alternate gene names: NA

Gene position: 2764108-2764698 (Clockwise)

Preceding gene: 188587173

Following gene: 188587181

Centisome position: 87.32

GC content: 29.78

Gene sequence:

>591_bases
ATGAGATATACTAGTAGAGAACTAAAAGCCAAAAAAAATAAGAAAAAAATTTTCGTTACTGCAATTGATTTAATAAGAAA
AAAAGGTTATGACAATGTATCAATAAATGAAATTTGCTCCTTGTCAGGATTTACTAAAGGGGCTTTTTATCATTACTTTA
ACTCAAAAGAAGACTTATTAATCCAATTGCTCAGAGATGTAGATGACTACTATACTGTGGAGGTATTACCTAAACTCGAT
GGAATGTCATCTACTGAAAAGTTAACTTATTTTATGCAACAATTTGCGTATTGTGGTTATGGAGTAGGTGTTGATATAAT
AAATAACCTGTTTAAGAGCCAAACAAAGGTTTTGAATGATTTTATGAACGATTATGATAGACCTTTTTTCAAAATCCTTT
TAGAGATAATAGATGAAGGTCAGAAAAAGGGTGAATTTACAGATAAATTGTCCTGCAAAGAGCTAGCCCAATATTGTATG
TCTTTTACATGGGGTGTTTTGCATAATTGGACATTGGAAAACGGCGAATACGATATTGAAGAAAAAATGAAGAGTTATTT
AAAGGTATTTATTTTGTCGATACTATATTAA

Upstream 100 bases:

>100_bases
CTTTATGCTGATGTTTATCGCAATCTGCCTGAAATTGACAATATAAACTAATCAAAATATAATTAAAATAACTGTAAATA
AGAAAGGATGCAATTATAAA

Downstream 100 bases:

>100_bases
TCCAAGTCAGTCTGCTTAGCTTTTAGAAATGTTTTTTGAAATCCTCATTGTATCCCAAGCGACTACATGCACCACATTGG
GTTTGAATATTAGTTATCAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRYTSRELKAKKNKKKIFVTAIDLIRKKGYDNVSINEICSLSGFTKGAFYHYFNSKEDLLIQLLRDVDDYYTVEVLPKLD
GMSSTEKLTYFMQQFAYCGYGVGVDIINNLFKSQTKVLNDFMNDYDRPFFKILLEIIDEGQKKGEFTDKLSCKELAQYCM
SFTWGVLHNWTLENGEYDIEEKMKSYLKVFILSILY

Sequences:

>Translated_196_residues
MRYTSRELKAKKNKKKIFVTAIDLIRKKGYDNVSINEICSLSGFTKGAFYHYFNSKEDLLIQLLRDVDDYYTVEVLPKLD
GMSSTEKLTYFMQQFAYCGYGVGVDIINNLFKSQTKVLNDFMNDYDRPFFKILLEIIDEGQKKGEFTDKLSCKELAQYCM
SFTWGVLHNWTLENGEYDIEEKMKSYLKVFILSILY
>Mature_196_residues
MRYTSRELKAKKNKKKIFVTAIDLIRKKGYDNVSINEICSLSGFTKGAFYHYFNSKEDLLIQLLRDVDDYYTVEVLPKLD
GMSSTEKLTYFMQQFAYCGYGVGVDIINNLFKSQTKVLNDFMNDYDRPFFKILLEIIDEGQKKGEFTDKLSCKELAQYCM
SFTWGVLHNWTLENGEYDIEEKMKSYLKVFILSILY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23048; Mature: 23048

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTSRELKAKKNKKKIFVTAIDLIRKKGYDNVSINEICSLSGFTKGAFYHYFNSKEDLL
CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHH
IQLLRDVDDYYTVEVLPKLDGMSSTEKLTYFMQQFAYCGYGVGVDIINNLFKSQTKVLND
HHHHHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FMNDYDRPFFKILLEIIDEGQKKGEFTDKLSCKELAQYCMSFTWGVLHNWTLENGEYDIE
HHHHHCCHHHHHHHHHHHCCHHCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
EKMKSYLKVFILSILY
HHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRYTSRELKAKKNKKKIFVTAIDLIRKKGYDNVSINEICSLSGFTKGAFYHYFNSKEDLL
CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHCCCHHHHH
IQLLRDVDDYYTVEVLPKLDGMSSTEKLTYFMQQFAYCGYGVGVDIINNLFKSQTKVLND
HHHHHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
FMNDYDRPFFKILLEIIDEGQKKGEFTDKLSCKELAQYCMSFTWGVLHNWTLENGEYDIE
HHHHHCCHHHHHHHHHHHCCHHCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
EKMKSYLKVFILSILY
HHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA