| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yecA [C]
Identifier: 188587157
GI number: 188587157
Start: 2747074
End: 2747793
Strand: Reverse
Name: yecA [C]
Synonym: Nther_2556
Alternate gene names: 188587157
Gene position: 2747793-2747074 (Counterclockwise)
Preceding gene: 188587158
Following gene: 188587152
Centisome position: 86.8
GC content: 35.28
Gene sequence:
>720_bases ATGAATCAGCTAGTTTTAGACTACATTATATCTCTGACCAATTTATACGGTCTTGTTCATAAGGATAAAGTGATAGAAAT TTATAATATGCAAAACAATGATCAAATAAACACAGATATAATTGACTCATTAATGGAAGAGCCCCCTGAAGAGCTTGATA ATAGTTTTGTTGAAATACACGAAGACTATTTCGTCTCCGAGTCACTGATAGAATTTGATGAGTTTGAATATCAATTAAAT CAACGCATAGGTAAACCGTTCTACATTCCACCGAAGAAAGAGCTATTAAAGTATAAAAACGATACCTATTTTGAGGTTAA TAAAGAATATAAAGCCCTATTAAACTATTTGACGGAAAATATTTTTGATGGGGACAAGGCTGCAGCTGAAGGTTTGTGTG AAGATATTCAGGTTATTTGCCAGTTCGGGTTTTCATTAAACAAGGTCTTTGAGGAATTTAACAATAGAGGGGTGGAATTT GACAGTGAAGAACAAGCTCACGAAGTCATGCAGCTTGTGATAGATCTTTCTAATAACACTAGGTTGTGGGAACATAATGG ACACACCCCCAGTGAGCTGCATCAAAAGAAAGGAAAATCCCAAAAGAGGTATATTTCCAACCAAAAAAATAAGCCAAGAA GGGTTGGCAAAAAAATAGGTAGAAATGAACCTTGCCCCTGCGGAAGCGGTAAAAAGTACAAAAAATGTTGTTTGGACTAA
Upstream 100 bases:
>100_bases ATGATTTTATATTGTTTCAGCGCGGGGATGTTTTGTGTTGATGAATCTTAAATTCATATTCCGTGACCAAAAAACTATTA GATAATTGAGAGGTGAAAAT
Downstream 100 bases:
>100_bases TAGAAATTAAGATAGCAACAATAAATAAGGGATCTCCTGAGATATCGGGTCAGAGATCCCTTATTTTTATTATCGAACAA GGTTAATTTTATTTTACAAG
Product: SEC-C motif domain protein
Products: NA
Alternate protein names: SecC Motif-Containing Protein; SecC Motif Containing Protein; SEC-C Domain-Containing Protein Domain-Containing Protein
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNQLVLDYIISLTNLYGLVHKDKVIEIYNMQNNDQINTDIIDSLMEEPPEELDNSFVEIHEDYFVSESLIEFDEFEYQLN QRIGKPFYIPPKKELLKYKNDTYFEVNKEYKALLNYLTENIFDGDKAAAEGLCEDIQVICQFGFSLNKVFEEFNNRGVEF DSEEQAHEVMQLVIDLSNNTRLWEHNGHTPSELHQKKGKSQKRYISNQKNKPRRVGKKIGRNEPCPCGSGKKYKKCCLD
Sequences:
>Translated_239_residues MNQLVLDYIISLTNLYGLVHKDKVIEIYNMQNNDQINTDIIDSLMEEPPEELDNSFVEIHEDYFVSESLIEFDEFEYQLN QRIGKPFYIPPKKELLKYKNDTYFEVNKEYKALLNYLTENIFDGDKAAAEGLCEDIQVICQFGFSLNKVFEEFNNRGVEF DSEEQAHEVMQLVIDLSNNTRLWEHNGHTPSELHQKKGKSQKRYISNQKNKPRRVGKKIGRNEPCPCGSGKKYKKCCLD >Mature_239_residues MNQLVLDYIISLTNLYGLVHKDKVIEIYNMQNNDQINTDIIDSLMEEPPEELDNSFVEIHEDYFVSESLIEFDEFEYQLN QRIGKPFYIPPKKELLKYKNDTYFEVNKEYKALLNYLTENIFDGDKAAAEGLCEDIQVICQFGFSLNKVFEEFNNRGVEF DSEEQAHEVMQLVIDLSNNTRLWEHNGHTPSELHQKKGKSQKRYISNQKNKPRRVGKKIGRNEPCPCGSGKKYKKCCLD
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28009; Mature: 28009
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLVLDYIISLTNLYGLVHKDKVIEIYNMQNNDQINTDIIDSLMEEPPEELDNSFVEIH CCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH EDYFVSESLIEFDEFEYQLNQRIGKPFYIPPKKELLKYKNDTYFEVNKEYKALLNYLTEN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEECHHHHHHHHHHHHH IFDGDKAAAEGLCEDIQVICQFGFSLNKVFEEFNNRGVEFDSEEQAHEVMQLVIDLSNNT HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC RLWEHNGHTPSELHQKKGKSQKRYISNQKNKPRRVGKKIGRNEPCPCGSGKKYKKCCLD EEEECCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MNQLVLDYIISLTNLYGLVHKDKVIEIYNMQNNDQINTDIIDSLMEEPPEELDNSFVEIH CCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH EDYFVSESLIEFDEFEYQLNQRIGKPFYIPPKKELLKYKNDTYFEVNKEYKALLNYLTEN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEECHHHHHHHHHHHHH IFDGDKAAAEGLCEDIQVICQFGFSLNKVFEEFNNRGVEFDSEEQAHEVMQLVIDLSNNT HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC RLWEHNGHTPSELHQKKGKSQKRYISNQKNKPRRVGKKIGRNEPCPCGSGKKYKKCCLD EEEECCCCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA