| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is wecC [H]
Identifier: 188587132
GI number: 188587132
Start: 2722850
End: 2724106
Strand: Reverse
Name: wecC [H]
Synonym: Nther_2529
Alternate gene names: 188587132
Gene position: 2724106-2722850 (Counterclockwise)
Preceding gene: 188587133
Following gene: 188587131
Centisome position: 86.05
GC content: 33.89
Gene sequence:
>1257_bases GTGAGTATAAATAAAATATGTGTAATGGGACTCGGGTATATTGGGCTTCCTACCGCTAGCATGTTAGCTACTAATGGATT TCAAGTCTTAGGCGTTGACGTTAATCATCGTGTTGTTAATATGATAAATCAGGGAGAAATACATATTGAAGAACCAGGAT TAAATACAATGGTTAATGCTTCAGTGAAGTCGGGAAACCTGGTAGCTAGTAATAAACCAGAAGAAGCAGATGCTTTTATT ATTGCTGTACCTACTCCTATAAATGGTGATAAGACTGTGAATTTAGATTACGTTAAAGATGCGATGAAAGAAATTATTCC ATATTTACAAAAAGATAATTTAATAGTCTTAGAGTCTACTGTTCCCCCTAGAACAACAGTAGATGTTTTACTGCCTTTGC TAGAAGAAACAGACTTAAAAGTAGGGGATGATGTATTTGTTGCTCACTGTCCAGAGAGAGTTCTTCCTGGAAATATATTG CATGAATTAGTAAATAACAATAGAATTATAGGTGGGATTAATAATAAATCATCTGAAAAAGCTAAAGAAATTTATGAGAA AATAGTACAAGGAGAGATTGTATTGACTGATGCAACTTCTTCAGAAATGGCTAAACTAATGGAGAATGTCTACAGAGATG TTAATATAGCTCTTGCTAATGAGCTCAGTCAAATTTCTGATGAACTTGATATTGATGCTTTAGAAGTTATTAAACTTTCT AATATGCATCCAAGAGTAAATATTCATCAGCCCGGTCCGGGTGTAGGAGGGCACTGCTTACCTGTAGATCCATATTTTAT TACAGAGAAAACTGATAAAGCGCAGATAATTAGTTTGAGTAGAAAGATAAATAATGAGATGCCTGATTTTGTAGTGGAAA AAGTAAAAGAGAAATTAAGCGATCTAACTCAACCAAAAGTTACAGTGTTAGGTGTATCATATAAAGGCAATGTTGATGAT ACAAGAGAAACCCCTGCTAGGGACATTATCAATAATCTACAAGAGATAGCTCAAGTTAAAATATATGACCCTCAAGTAAG GAACTTTGATCATGAATTGGTAAACTTAGAAGAAGCGTTTAAAGATAGTGACATAGTGGTTGTATTGGCTGAACATAGTG AATTTAAATTCTTAGCTCCAAATGAATTAGGGAAACTTATGAGGACAAAACAAGTTTTTGATACTAAAAACTGCCTGAAT CACAATTCTTGGGTCGATGGTGGATTTTATGTTGATGTACTAGGGAAAAGAATGTAA
Upstream 100 bases:
>100_bases ATGATCAAGTTAGCTTTAAATATTATTTAAAATAAACTTATGTAATAAATAGCTGTGAGTATTTTAATGAACCAATTGTT ATATATAAGGAGATGATACA
Downstream 100 bases:
>100_bases ACAGGTTAGGTGGTGACGCTAGTGACAAGTTCTAATAACAAACATATACTCATTTTAAATCATCATGCAAGTTCACCGAA TGTCGGTGGAGGTGCTAGAC
Product: nucleotide sugar dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSINKICVMGLGYIGLPTASMLATNGFQVLGVDVNHRVVNMINQGEIHIEEPGLNTMVNASVKSGNLVASNKPEEADAFI IAVPTPINGDKTVNLDYVKDAMKEIIPYLQKDNLIVLESTVPPRTTVDVLLPLLEETDLKVGDDVFVAHCPERVLPGNIL HELVNNNRIIGGINNKSSEKAKEIYEKIVQGEIVLTDATSSEMAKLMENVYRDVNIALANELSQISDELDIDALEVIKLS NMHPRVNIHQPGPGVGGHCLPVDPYFITEKTDKAQIISLSRKINNEMPDFVVEKVKEKLSDLTQPKVTVLGVSYKGNVDD TRETPARDIINNLQEIAQVKIYDPQVRNFDHELVNLEEAFKDSDIVVVLAEHSEFKFLAPNELGKLMRTKQVFDTKNCLN HNSWVDGGFYVDVLGKRM
Sequences:
>Translated_418_residues MSINKICVMGLGYIGLPTASMLATNGFQVLGVDVNHRVVNMINQGEIHIEEPGLNTMVNASVKSGNLVASNKPEEADAFI IAVPTPINGDKTVNLDYVKDAMKEIIPYLQKDNLIVLESTVPPRTTVDVLLPLLEETDLKVGDDVFVAHCPERVLPGNIL HELVNNNRIIGGINNKSSEKAKEIYEKIVQGEIVLTDATSSEMAKLMENVYRDVNIALANELSQISDELDIDALEVIKLS NMHPRVNIHQPGPGVGGHCLPVDPYFITEKTDKAQIISLSRKINNEMPDFVVEKVKEKLSDLTQPKVTVLGVSYKGNVDD TRETPARDIINNLQEIAQVKIYDPQVRNFDHELVNLEEAFKDSDIVVVLAEHSEFKFLAPNELGKLMRTKQVFDTKNCLN HNSWVDGGFYVDVLGKRM >Mature_417_residues SINKICVMGLGYIGLPTASMLATNGFQVLGVDVNHRVVNMINQGEIHIEEPGLNTMVNASVKSGNLVASNKPEEADAFII AVPTPINGDKTVNLDYVKDAMKEIIPYLQKDNLIVLESTVPPRTTVDVLLPLLEETDLKVGDDVFVAHCPERVLPGNILH ELVNNNRIIGGINNKSSEKAKEIYEKIVQGEIVLTDATSSEMAKLMENVYRDVNIALANELSQISDELDIDALEVIKLSN MHPRVNIHQPGPGVGGHCLPVDPYFITEKTDKAQIISLSRKINNEMPDFVVEKVKEKLSDLTQPKVTVLGVSYKGNVDDT RETPARDIINNLQEIAQVKIYDPQVRNFDHELVNLEEAFKDSDIVVVLAEHSEFKFLAPNELGKLMRTKQVFDTKNCLNH NSWVDGGFYVDVLGKRM
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=468, Percent_Identity=26.7094017094017, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI296040443, Length=461, Percent_Identity=25.3796095444685, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI296040438, Length=367, Percent_Identity=24.2506811989101, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI48994968, Length=402, Percent_Identity=43.0348258706468, Blast_Score=333, Evalue=1e-92, Organism=Escherichia coli, GI1788340, Length=391, Percent_Identity=24.5524296675192, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17560350, Length=458, Percent_Identity=25.5458515283843, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI17136908, Length=462, Percent_Identity=27.0562770562771, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 46400; Mature: 46269
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINKICVMGLGYIGLPTASMLATNGFQVLGVDVNHRVVNMINQGEIHIEEPGLNTMVNA CCCCCEEEEECCCCCCCCHHHHHCCCCEEEEEECCHHHHHHCCCCEEEEECCCCCCEEEC SVKSGNLVASNKPEEADAFIIAVPTPINGDKTVNLDYVKDAMKEIIPYLQKDNLIVLEST CCCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECC VPPRTTVDVLLPLLEETDLKVGDDVFVAHCPERVLPGNILHELVNNNRIIGGINNKSSEK CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHH AKEIYEKIVQGEIVLTDATSSEMAKLMENVYRDVNIALANELSQISDELDIDALEVIKLS HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHC NMHPRVNIHQPGPGVGGHCLPVDPYFITEKTDKAQIISLSRKINNEMPDFVVEKVKEKLS CCCCEEEEECCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH DLTQPKVTVLGVSYKGNVDDTRETPARDIINNLQEIAQVKIYDPQVRNFDHELVNLEEAF HCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEECCHHHCCCHHHHHHHHHC KDSDIVVVLAEHSEFKFLAPNELGKLMRTKQVFDTKNCLNHNSWVDGGFYVDVLGKRM CCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure SINKICVMGLGYIGLPTASMLATNGFQVLGVDVNHRVVNMINQGEIHIEEPGLNTMVNA CCCCEEEEECCCCCCCCHHHHHCCCCEEEEEECCHHHHHHCCCCEEEEECCCCCCEEEC SVKSGNLVASNKPEEADAFIIAVPTPINGDKTVNLDYVKDAMKEIIPYLQKDNLIVLEST CCCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECC VPPRTTVDVLLPLLEETDLKVGDDVFVAHCPERVLPGNILHELVNNNRIIGGINNKSSEK CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHH AKEIYEKIVQGEIVLTDATSSEMAKLMENVYRDVNIALANELSQISDELDIDALEVIKLS HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHC NMHPRVNIHQPGPGVGGHCLPVDPYFITEKTDKAQIISLSRKINNEMPDFVVEKVKEKLS CCCCEEEEECCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH DLTQPKVTVLGVSYKGNVDDTRETPARDIINNLQEIAQVKIYDPQVRNFDHELVNLEEAF HCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEECCHHHCCCHHHHHHHHHC KDSDIVVVLAEHSEFKFLAPNELGKLMRTKQVFDTKNCLNHNSWVDGGFYVDVLGKRM CCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA