| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188587109
Identifier: 188587109
GI number: 188587109
Start: 2697096
End: 2697767
Strand: Reverse
Name: 188587109
Synonym: Nther_2503
Alternate gene names: NA
Gene position: 2697767-2697096 (Counterclockwise)
Preceding gene: 188587110
Following gene: 188587108
Centisome position: 85.22
GC content: 29.76
Gene sequence:
>672_bases ATGATGCAGGCGTCACTCGATACAAACGTGATCATCCATTTATACAAAGCTGACATGCAGAGTGTTTTATTTAAAAGATT TAAAAATGTTGTTATTTATGAATTTATTAGAACACATGAATTAGAACGACATGCAGATGATGAAATTTTGTCTTTATTCG ATCAGGATTGTAAACAAGGTAGGATAGAAATGATAGATGATAAATATATTCGTGACAATGGGTTGTTTAAATTATTTGAC AATCTTGTTCGAGACTATAGAATTATTTTTGACGATTGTGATTTAGGTGAAATTTATGCTATTTCTTTGGCAAAAATTCT AGGTTGTATTTGCTTAGTCACTGATGATATTAAAGAGAAAGGGCCACATTATACATTAATGAGAGAAGCAGAATCGGATG TTATTCCCCTGGCTTTTTATGAACTTTTATTCATTGATTATTTGGATGGAAAATTAACTGCTGAAAACTTATTAAGTCAT TTTAATTTGGTCTGTGAGGTATCATGTTTGAATATTGACATTGAATCAAAGGTGAAGGCTTTTATAAGAAGGTTTTGGAC AAGCCCTTATGATGAAGCTGAAAAGACCTGGATGAAAGAATATTGTGATAGTAATAATATTAATGCTAAACAGAAAATGA AAAAATTACAAAAAGTCATAGAAAATAATTGA
Upstream 100 bases:
>100_bases ATGTGAAAGTAAACTTAGACGATCTAGTTTTCGTTGATGAACAAGAACAACTACAAGAAAAGGAAAAAGAAGAACTAGAT GATCTAATTGGGAGGATGGA
Downstream 100 bases:
>100_bases GAAAAAATAATAAGTTCCTTTTCTTATTATTTTTCTAACTATTTTACATAGAGGTTTTAGCAATAATTATTTTGTAATGA TTTCAACTTTTTTAACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MMQASLDTNVIIHLYKADMQSVLFKRFKNVVIYEFIRTHELERHADDEILSLFDQDCKQGRIEMIDDKYIRDNGLFKLFD NLVRDYRIIFDDCDLGEIYAISLAKILGCICLVTDDIKEKGPHYTLMREAESDVIPLAFYELLFIDYLDGKLTAENLLSH FNLVCEVSCLNIDIESKVKAFIRRFWTSPYDEAEKTWMKEYCDSNNINAKQKMKKLQKVIENN
Sequences:
>Translated_223_residues MMQASLDTNVIIHLYKADMQSVLFKRFKNVVIYEFIRTHELERHADDEILSLFDQDCKQGRIEMIDDKYIRDNGLFKLFD NLVRDYRIIFDDCDLGEIYAISLAKILGCICLVTDDIKEKGPHYTLMREAESDVIPLAFYELLFIDYLDGKLTAENLLSH FNLVCEVSCLNIDIESKVKAFIRRFWTSPYDEAEKTWMKEYCDSNNINAKQKMKKLQKVIENN >Mature_223_residues MMQASLDTNVIIHLYKADMQSVLFKRFKNVVIYEFIRTHELERHADDEILSLFDQDCKQGRIEMIDDKYIRDNGLFKLFD NLVRDYRIIFDDCDLGEIYAISLAKILGCICLVTDDIKEKGPHYTLMREAESDVIPLAFYELLFIDYLDGKLTAENLLSH FNLVCEVSCLNIDIESKVKAFIRRFWTSPYDEAEKTWMKEYCDSNNINAKQKMKKLQKVIENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26267; Mature: 26267
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQASLDTNVIIHLYKADMQSVLFKRFKNVVIYEFIRTHELERHADDEILSLFDQDCKQG CCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC RIEMIDDKYIRDNGLFKLFDNLVRDYRIIFDDCDLGEIYAISLAKILGCICLVTDDIKEK CEEECCCHHHCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GPHYTLMREAESDVIPLAFYELLFIDYLDGKLTAENLLSHFNLVCEVSCLNIDIESKVKA CCCEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHH FIRRFWTSPYDEAEKTWMKEYCDSNNINAKQKMKKLQKVIENN HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MMQASLDTNVIIHLYKADMQSVLFKRFKNVVIYEFIRTHELERHADDEILSLFDQDCKQG CCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC RIEMIDDKYIRDNGLFKLFDNLVRDYRIIFDDCDLGEIYAISLAKILGCICLVTDDIKEK CEEECCCHHHCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GPHYTLMREAESDVIPLAFYELLFIDYLDGKLTAENLLSHFNLVCEVSCLNIDIESKVKA CCCEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHH FIRRFWTSPYDEAEKTWMKEYCDSNNINAKQKMKKLQKVIENN HHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA