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The map label for this gene is 188587105

Identifier: 188587105

GI number: 188587105

Start: 2691275

End: 2692843

Strand: Reverse

Name: 188587105

Synonym: Nther_2499

Alternate gene names: NA

Gene position: 2692843-2691275 (Counterclockwise)

Preceding gene: 188587106

Following gene: 188587104

Centisome position: 85.07

GC content: 41.17

Gene sequence:

>1569_bases
ATGACAAAACAGGATAAAAACAATCAACAAAAACAAAGCCAAGAAAATCAAGAGAGACAAGATCATACCGTCCAAGAAAA
TCAGGACTTTGGTGAGCAGGAGATAGACCTGCGGGAACTGATCGAAGTCCTTCTAAAACGCAAATGGCTTATTGCAGGGA
TTATGGCCGTAGCTGTCTTTTTAGCAGGGATATTCACTTTGTTAATCCGTGAGCCCTATGTGGCAACCATATTGGATATG
GAATTTGATGAAATAGAGCAGGGAGAATACCCTAGTGGAGAAGCTTTTTCCACCTCAGATATTATATCTCCCTATGTTTT
GTCCCGGGTAGTGGAAGATTTGGAGCTTGACAGGTATGATCTGGGAGTTCGTGAACTCCGAGAGGTATTAGAGGTGGAAG
AACTGTATTATCCCGTAGATGATGACGATGAAGAAACAGAACCGGCACATCAATATCAACTTACCATCTATGAGCATGAA
GATATCGAAATGTCAACACAGCTCAAGAGACAGATTATTTCCCGGGTAATAGATGTGTATCAACAGGAATATACTAGTGA
ATTTATCGAAAGACCTCCCTTTCCTAGGTTGACGGAAGATCATGAAGAATTTTTAGATATGGACTATCCTTTTATAGCCA
GGAATTTGCGTTCATATCAAGGAATGTTTCAAGATCATATAGAGGAACTCCTTGAGGAAGCAGATGATGAGGAAGAATTT
GCAGAAACTCCCATAGATGAATTTTATTCTTCAACTTACGGAATGTCCTTTCATGACTTGTTAAGGGATTTAGAATCCCT
AGAAGAAACTCAGTATCAGGATATATCAGCTGCCATCAGGACCAATGCTCTTTCAAAGGACCCTGAAAGAGCCATAACGA
GATACAGTCAAATGATAGATGAACTAGAAAGAGAAGAAGAGAAAAAACAAAGAGAAGCCGATCATGTCAGAGAACTTCTA
GGAGATGCCGATCAGTTGAGGACGGGAGATCTTCCCAGCATGTTCCCCAGTGTGATTGAAGAAGGGGATCACGATCTACT
GGGAGAGATTTACGATAAGTTGTATGCCGATAACTTCTATCCCCAGCTGTTAGAGGTTTCCTTGGAAGCTGCCGATGATT
CCATAGATAAAAAATACGAAATCCAACGTTTGGAAAGAGATATTGAACGGATGGAAGCTGCTAAGGCTGCTAAGAATAGT
GATGATGTAGAGGATAACTCAGTTGACAATTTAGACAATAATGATAACTTAGAGGATGACAATGAAGGAAATAATCCCGG
CTCAGGTATGGACTTGGAAGAGCTTAAAGAGCAGGTAGATACGGATATTTCCCGATTAGTAGCTGATTTAAACCGCTTGG
TAAATATACACAATAATATGATGGAAGAATACTATGAAGAACGAGCCCGGGAAGGAATCAGCTATGCCAGGATGCCCTTT
GCAGGAACTGAAGGAGGTAACCTGCAGTTGAATGTGGCCCTGGGAGCTGTCCTTGGTCTCATGATCGGAGTCTTCGGGTC
TTTCTTCCACGAGTTTTGGACAAGAACGGATAGAAATAAAAAAGAATAG

Upstream 100 bases:

>100_bases
GCCGGTCTGGGAGCGGCAATAGTTAAAGAGTACCGGAGAGATATTAGCCGAGTGGTTTCTAATCAAAAAGATGCCTTTAT
GGATACGGGGGAGAAAGACA

Downstream 100 bases:

>100_bases
TATGCTATATATGAGATTAAATACTATAATCTTTTAGTGTGAACAAAACCTAGAATCTGGACTTTATTTATTAATAAGGT
CCATGATTCTAGGTAATTTT

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MTKQDKNNQQKQSQENQERQDHTVQENQDFGEQEIDLRELIEVLLKRKWLIAGIMAVAVFLAGIFTLLIREPYVATILDM
EFDEIEQGEYPSGEAFSTSDIISPYVLSRVVEDLELDRYDLGVRELREVLEVEELYYPVDDDDEETEPAHQYQLTIYEHE
DIEMSTQLKRQIISRVIDVYQQEYTSEFIERPPFPRLTEDHEEFLDMDYPFIARNLRSYQGMFQDHIEELLEEADDEEEF
AETPIDEFYSSTYGMSFHDLLRDLESLEETQYQDISAAIRTNALSKDPERAITRYSQMIDELEREEEKKQREADHVRELL
GDADQLRTGDLPSMFPSVIEEGDHDLLGEIYDKLYADNFYPQLLEVSLEAADDSIDKKYEIQRLERDIERMEAAKAAKNS
DDVEDNSVDNLDNNDNLEDDNEGNNPGSGMDLEELKEQVDTDISRLVADLNRLVNIHNNMMEEYYEERAREGISYARMPF
AGTEGGNLQLNVALGAVLGLMIGVFGSFFHEFWTRTDRNKKE

Sequences:

>Translated_522_residues
MTKQDKNNQQKQSQENQERQDHTVQENQDFGEQEIDLRELIEVLLKRKWLIAGIMAVAVFLAGIFTLLIREPYVATILDM
EFDEIEQGEYPSGEAFSTSDIISPYVLSRVVEDLELDRYDLGVRELREVLEVEELYYPVDDDDEETEPAHQYQLTIYEHE
DIEMSTQLKRQIISRVIDVYQQEYTSEFIERPPFPRLTEDHEEFLDMDYPFIARNLRSYQGMFQDHIEELLEEADDEEEF
AETPIDEFYSSTYGMSFHDLLRDLESLEETQYQDISAAIRTNALSKDPERAITRYSQMIDELEREEEKKQREADHVRELL
GDADQLRTGDLPSMFPSVIEEGDHDLLGEIYDKLYADNFYPQLLEVSLEAADDSIDKKYEIQRLERDIERMEAAKAAKNS
DDVEDNSVDNLDNNDNLEDDNEGNNPGSGMDLEELKEQVDTDISRLVADLNRLVNIHNNMMEEYYEERAREGISYARMPF
AGTEGGNLQLNVALGAVLGLMIGVFGSFFHEFWTRTDRNKKE
>Mature_521_residues
TKQDKNNQQKQSQENQERQDHTVQENQDFGEQEIDLRELIEVLLKRKWLIAGIMAVAVFLAGIFTLLIREPYVATILDME
FDEIEQGEYPSGEAFSTSDIISPYVLSRVVEDLELDRYDLGVRELREVLEVEELYYPVDDDDEETEPAHQYQLTIYEHED
IEMSTQLKRQIISRVIDVYQQEYTSEFIERPPFPRLTEDHEEFLDMDYPFIARNLRSYQGMFQDHIEELLEEADDEEEFA
ETPIDEFYSSTYGMSFHDLLRDLESLEETQYQDISAAIRTNALSKDPERAITRYSQMIDELEREEEKKQREADHVRELLG
DADQLRTGDLPSMFPSVIEEGDHDLLGEIYDKLYADNFYPQLLEVSLEAADDSIDKKYEIQRLERDIERMEAAKAAKNSD
DVEDNSVDNLDNNDNLEDDNEGNNPGSGMDLEELKEQVDTDISRLVADLNRLVNIHNNMMEEYYEERAREGISYARMPFA
GTEGGNLQLNVALGAVLGLMIGVFGSFFHEFWTRTDRNKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60884; Mature: 60752

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQDKNNQQKQSQENQERQDHTVQENQDFGEQEIDLRELIEVLLKRKWLIAGIMAVAVF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAGIFTLLIREPYVATILDMEFDEIEQGEYPSGEAFSTSDIISPYVLSRVVEDLELDRYD
HHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LGVRELREVLEVEELYYPVDDDDEETEPAHQYQLTIYEHEDIEMSTQLKRQIISRVIDVY
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHH
QQEYTSEFIERPPFPRLTEDHEEFLDMDYPFIARNLRSYQGMFQDHIEELLEEADDEEEF
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AETPIDEFYSSTYGMSFHDLLRDLESLEETQYQDISAAIRTNALSKDPERAITRYSQMID
HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ELEREEEKKQREADHVRELLGDADQLRTGDLPSMFPSVIEEGDHDLLGEIYDKLYADNFY
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHH
PQLLEVSLEAADDSIDKKYEIQRLERDIERMEAAKAAKNSDDVEDNSVDNLDNNDNLEDD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NEGNNPGSGMDLEELKEQVDTDISRLVADLNRLVNIHNNMMEEYYEERAREGISYARMPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
AGTEGGNLQLNVALGAVLGLMIGVFGSFFHEFWTRTDRNKKE
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKQDKNNQQKQSQENQERQDHTVQENQDFGEQEIDLRELIEVLLKRKWLIAGIMAVAVF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAGIFTLLIREPYVATILDMEFDEIEQGEYPSGEAFSTSDIISPYVLSRVVEDLELDRYD
HHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LGVRELREVLEVEELYYPVDDDDEETEPAHQYQLTIYEHEDIEMSTQLKRQIISRVIDVY
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHH
QQEYTSEFIERPPFPRLTEDHEEFLDMDYPFIARNLRSYQGMFQDHIEELLEEADDEEEF
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AETPIDEFYSSTYGMSFHDLLRDLESLEETQYQDISAAIRTNALSKDPERAITRYSQMID
HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ELEREEEKKQREADHVRELLGDADQLRTGDLPSMFPSVIEEGDHDLLGEIYDKLYADNFY
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHH
PQLLEVSLEAADDSIDKKYEIQRLERDIERMEAAKAAKNSDDVEDNSVDNLDNNDNLEDD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
NEGNNPGSGMDLEELKEQVDTDISRLVADLNRLVNIHNNMMEEYYEERAREGISYARMPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
AGTEGGNLQLNVALGAVLGLMIGVFGSFFHEFWTRTDRNKKE
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA