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The map label for this gene is 188587077

Identifier: 188587077

GI number: 188587077

Start: 2658402

End: 2659148

Strand: Direct

Name: 188587077

Synonym: Nther_2471

Alternate gene names: NA

Gene position: 2658402-2659148 (Clockwise)

Preceding gene: 188587076

Following gene: 188587078

Centisome position: 83.98

GC content: 33.07

Gene sequence:

>747_bases
TTGTGCAGTGCTAAGAGTTCTTTTTCAAACCAAAATCAGAAAAACATAAACAACTATCATCCCTGGGAACCAAGGACAAA
ATTGGTAGCAGGAGTCATATTTGTTTTCGGAACTATCAGTTTAGACAATATTTCGTTGTTATCAGCTGCCTTACTATTTT
CAGTAGTCTTTGCCCTTTGTTCAGGTCTCAATCTAAGGCTACTCATAAAAAAACTATCTATTTTAATTCCATTTTTGGCT
TTAATGAATATACCCTTGATTTTTGGAGCTGGATTCCCACTATCAATGGATCGAGTAGAATTTGCAGCTTTGATTTCTTT
AAGGGCCCTTACTTCTATGACTTTTACACTGTTTGTTTTTATCAATCAACCAATTGAGGAAATGCTTGAAGCCATGGAAC
ACCTTAAAGTTCCTTCTGTGATAACAACAGTAATTTATTTGGCATATCGATATGGATTTTTATTTATCAAAGAAATTCAA
ATCAATATGACTGCATTAAAGGCACGTCTTTTTACAACTCGTTTAAATAAATACACTTTAAAAACTTTAGGAGAGTTAGC
AGGAGGAATATTTATTAAAGCTATTCATCATTCAGAGATAGTTCATCAGGCTATGGCTGCTAGGGGTTTTCAAGGTAAAA
TACCTGTTGGCAAACCTGAGCCAATTAAAAAAACGGATATAATTAAAACAATTTTGCCAGTTTTATTCATGATTTTTCTG
ATCATTATTGAACAGGTGGTGTTTTAA

Upstream 100 bases:

>100_bases
ACCATTAACAAAGATTCACTTATTAATTATTAAGAAAAATTATAGTCAGGAGGTGACGGCCATAGTAAATCAAAAACCTT
AAAAAGTGAGGGAAACATCT

Downstream 100 bases:

>100_bases
TGGCCTTTGCTATCGAAATAAACGATTTAAACTATACCTACCCTGATCAAACCCCTGCATTAACAGGAATTAATCTTAAA
ATTACAAAACAGAAAAAAAC

Product: cobalt ABC transporter, inner membrane subunit CbiQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MCSAKSSFSNQNQKNINNYHPWEPRTKLVAGVIFVFGTISLDNISLLSAALLFSVVFALCSGLNLRLLIKKLSILIPFLA
LMNIPLIFGAGFPLSMDRVEFAALISLRALTSMTFTLFVFINQPIEEMLEAMEHLKVPSVITTVIYLAYRYGFLFIKEIQ
INMTALKARLFTTRLNKYTLKTLGELAGGIFIKAIHHSEIVHQAMAARGFQGKIPVGKPEPIKKTDIIKTILPVLFMIFL
IIIEQVVF

Sequences:

>Translated_248_residues
MCSAKSSFSNQNQKNINNYHPWEPRTKLVAGVIFVFGTISLDNISLLSAALLFSVVFALCSGLNLRLLIKKLSILIPFLA
LMNIPLIFGAGFPLSMDRVEFAALISLRALTSMTFTLFVFINQPIEEMLEAMEHLKVPSVITTVIYLAYRYGFLFIKEIQ
INMTALKARLFTTRLNKYTLKTLGELAGGIFIKAIHHSEIVHQAMAARGFQGKIPVGKPEPIKKTDIIKTILPVLFMIFL
IIIEQVVF
>Mature_248_residues
MCSAKSSFSNQNQKNINNYHPWEPRTKLVAGVIFVFGTISLDNISLLSAALLFSVVFALCSGLNLRLLIKKLSILIPFLA
LMNIPLIFGAGFPLSMDRVEFAALISLRALTSMTFTLFVFINQPIEEMLEAMEHLKVPSVITTVIYLAYRYGFLFIKEIQ
INMTALKARLFTTRLNKYTLKTLGELAGGIFIKAIHHSEIVHQAMAARGFQGKIPVGKPEPIKKTDIIKTILPVLFMIFL
IIIEQVVF

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 27809; Mature: 27809

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHC
>Mature Secondary Structure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HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]