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The map label for this gene is 188586992

Identifier: 188586992

GI number: 188586992

Start: 2546550

End: 2547860

Strand: Reverse

Name: 188586992

Synonym: Nther_2384

Alternate gene names: NA

Gene position: 2547860-2546550 (Counterclockwise)

Preceding gene: 188586993

Following gene: 188586991

Centisome position: 80.49

GC content: 41.72

Gene sequence:

>1311_bases
ATGAATGGAAAAAGTACTTCTTACCAATTATTAAATAATGAACGAGGAGAACAAGTTCGTAGCTTAATTTTTACAGGGTT
AAGCATCCTTTTGATAATAGTATCACTATTTTCATTGTTTGACTTTTTCTTTAGGAACTTTGGATTACCTACACCATTGG
CCAGGGGTTGGAATGATGCCTTAATGCTGGCCGGTTTTTTCATGCTGGTGTACTTATATAAAAGTAGATGGCTATCGGCC
TATCATAAAACCGAAACTGACATGCCCTATGTTGTTTTGATGGCTTTTGCCGCTATTACTATCATTGTTAATGGAATTCC
CCCCATTGTAGGGATTGACGGCCTTCGAGTGTTGGGACAGGTGGTATTTTGGTACTTAATTGTGTTTTATGCCTTAAAAA
ACGTAGGTGACAGCAAATTTCTTCAGGAATTGGTTACATACATGCTGATTGCGGCGGCTATTGTGGCTTTGTACGGGGTG
CTTCAGTATATCTTTGCCTTTGAAACTCCGGCTAACTGGATCGACAGGGATATGGAAAACATTCGTACTCGTGTGTTTTC
AACTATTGGAAATCCTAATGCCTTAGGTGCTTATATGGCTATGTTTATACCTGTGTCTCTAAGCCTGGGCCTTAGGCGGA
AATTGTCTTTGAAGTGGCGGATAGTTTATTTGGCTATAGTATTAGTTATGGGCCTGACACTGTTATTCACTTTTTCAAGA
GGAGCCTGGATTGGTTGTATGGCGGGTGTCGGGTTATTGATGGTCATGAAGGATAAACGATTTATAATCTTGTTCATGAT
ACTGTTGGTTTTAATGCCTGTGGTACTTCCTGACACCATAACTTCCAGATTATTCCACGCATTTTCACCAGAATACATTG
AACGAAGTTCAGAAGCAGGTCGTTTGTTTTACTGGCGTCAGGCCTTTGTGCGAATGATAGATAATCCGGTATTCGGGACA
GGCTTGGGTTCCTTTGGGGATACTGTAGCCATGCGCCATGATATGCCGGGTGCAGTGTGGGTAGATAATCATTACTTAAA
AACTGGTGCGGAAATGGGAATAGTCGGATTGGGTATCTTCTTGTGGTTAATGGCCAGTGTTTTCTTGAAAGGTTATCGCA
ATCTCAAAAGGTTATCAGATCCCTACTCCAAGGAACTAACTCGAGGGATTCTTGCCGGTTTATTTGCCGTCCTTATACAG
AACGGAACTGCCAGTATTTTTGAAGTCCTGGTGGTAGGAACTTACTTTTGGATTCTGGTAGGTGTACTTCATGCTCTACC
TCTGCTTTACGAAAGGGAGGGACAGGCATGA

Upstream 100 bases:

>100_bases
AAAAAAGTTGATATGGAAAAATCTTAAACCTGTCACTGGGCGAGTAAATTATGTTAAAATATAGATGGCATAACTAGGTT
CCAAAAAGGGAGAGTTGCTT

Downstream 100 bases:

>100_bases
AAGTAATTCATTTAATCAGCGGGAGCGAAGGAGGCGGTTCACGATTTCAGGTATTAAGCCTCCTGGAAGAACTTGTTCAA
AATACAGATGATGACCATGA

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family Protein

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNGKSTSYQLLNNERGEQVRSLIFTGLSILLIIVSLFSLFDFFFRNFGLPTPLARGWNDALMLAGFFMLVYLYKSRWLSA
YHKTETDMPYVVLMAFAAITIIVNGIPPIVGIDGLRVLGQVVFWYLIVFYALKNVGDSKFLQELVTYMLIAAAIVALYGV
LQYIFAFETPANWIDRDMENIRTRVFSTIGNPNALGAYMAMFIPVSLSLGLRRKLSLKWRIVYLAIVLVMGLTLLFTFSR
GAWIGCMAGVGLLMVMKDKRFIILFMILLVLMPVVLPDTITSRLFHAFSPEYIERSSEAGRLFYWRQAFVRMIDNPVFGT
GLGSFGDTVAMRHDMPGAVWVDNHYLKTGAEMGIVGLGIFLWLMASVFLKGYRNLKRLSDPYSKELTRGILAGLFAVLIQ
NGTASIFEVLVVGTYFWILVGVLHALPLLYEREGQA

Sequences:

>Translated_436_residues
MNGKSTSYQLLNNERGEQVRSLIFTGLSILLIIVSLFSLFDFFFRNFGLPTPLARGWNDALMLAGFFMLVYLYKSRWLSA
YHKTETDMPYVVLMAFAAITIIVNGIPPIVGIDGLRVLGQVVFWYLIVFYALKNVGDSKFLQELVTYMLIAAAIVALYGV
LQYIFAFETPANWIDRDMENIRTRVFSTIGNPNALGAYMAMFIPVSLSLGLRRKLSLKWRIVYLAIVLVMGLTLLFTFSR
GAWIGCMAGVGLLMVMKDKRFIILFMILLVLMPVVLPDTITSRLFHAFSPEYIERSSEAGRLFYWRQAFVRMIDNPVFGT
GLGSFGDTVAMRHDMPGAVWVDNHYLKTGAEMGIVGLGIFLWLMASVFLKGYRNLKRLSDPYSKELTRGILAGLFAVLIQ
NGTASIFEVLVVGTYFWILVGVLHALPLLYEREGQA
>Mature_436_residues
MNGKSTSYQLLNNERGEQVRSLIFTGLSILLIIVSLFSLFDFFFRNFGLPTPLARGWNDALMLAGFFMLVYLYKSRWLSA
YHKTETDMPYVVLMAFAAITIIVNGIPPIVGIDGLRVLGQVVFWYLIVFYALKNVGDSKFLQELVTYMLIAAAIVALYGV
LQYIFAFETPANWIDRDMENIRTRVFSTIGNPNALGAYMAMFIPVSLSLGLRRKLSLKWRIVYLAIVLVMGLTLLFTFSR
GAWIGCMAGVGLLMVMKDKRFIILFMILLVLMPVVLPDTITSRLFHAFSPEYIERSSEAGRLFYWRQAFVRMIDNPVFGT
GLGSFGDTVAMRHDMPGAVWVDNHYLKTGAEMGIVGLGIFLWLMASVFLKGYRNLKRLSDPYSKELTRGILAGLFAVLIQ
NGTASIFEVLVVGTYFWILVGVLHALPLLYEREGQA

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49171; Mature: 49171

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNGKSTSYQLLNNERGEQVRSLIFTGLSILLIIVSLFSLFDFFFRNFGLPTPLARGWNDA
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHH
LMLAGFFMLVYLYKSRWLSAYHKTETDMPYVVLMAFAAITIIVNGIPPIVGIDGLRVLGQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VVFWYLIVFYALKNVGDSKFLQELVTYMLIAAAIVALYGVLQYIFAFETPANWIDRDMEN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IRTRVFSTIGNPNALGAYMAMFIPVSLSLGLRRKLSLKWRIVYLAIVLVMGLTLLFTFSR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAWIGCMAGVGLLMVMKDKRFIILFMILLVLMPVVLPDTITSRLFHAFSPEYIERSSEAG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCC
RLFYWRQAFVRMIDNPVFGTGLGSFGDTVAMRHDMPGAVWVDNHYLKTGAEMGIVGLGIF
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCHHHCCCHHHHHHHHHH
LWLMASVFLKGYRNLKRLSDPYSKELTRGILAGLFAVLIQNGTASIFEVLVVGTYFWILV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GVLHALPLLYEREGQA
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA