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The map label for this gene is fliD [H]

Identifier: 188586838

GI number: 188586838

Start: 2367254

End: 2368849

Strand: Reverse

Name: fliD [H]

Synonym: Nther_2229

Alternate gene names: 188586838

Gene position: 2368849-2367254 (Counterclockwise)

Preceding gene: 188586839

Following gene: 188586837

Centisome position: 74.83

GC content: 41.04

Gene sequence:

>1596_bases
TTGCGACTTGGAGGATTAGCAACAGGTTTTGATACAGAAAACCTGGTAAAACAGCTAGCAGAATTAGAAAGACAACCTAT
TCAGCGCCACGAACAGGATATCCAAGAGATAGAAGGAGTTAAAGACGCATGGCGAAATGTCAATAAACTGTTATCGGGAG
TTAGTGATGAACTCTCTGGACTTCAGAGTGAAGATACCTTTCAAGGTATGGAAGCCAGCTCTACTAATGAAAATATTGAA
GTTTCCGCTGACAATCAAGCAGTAGAAGCAGATTATGCATTTGAAATACAGCAAAAAGCCCAAAATCAAAGACTGGCTTC
ACTAGACACTATAAACAATGTGGAAAATGAAGATGGTCACAAAGGTACTCTGACCTTTGATTTTGGTGATGAAGAATTTG
ATATTAAAGTGGACGAATCAGACACCATTCAGGACATCGCTGATAAAATCAATAACAATGAGATAGAAAATAATGACGAT
AAAACCATTCCCATGGGTGCTACCGTCATAGCTGGTGAATACTTAGAGTTTAACATCGATGAAGGATATGAACTAGAAAA
TATTGAGGCAGACAATGAGGAAAAGGCAGACAATGATGGAGACAGTGACTTATTAGGCTGGCTGCAACTAGATGCTGATA
TAAAGAACGATGATGAAGAAAATAATGATGTTAATGAAGATGATAGAGAAGTACTGCAAGTGCAAGAAAGCCAAAATGCC
AAAGTCATAGTAAACGGCATTCAAGGTATTGAATCTTCCACTAATGAAATAGAGATCGCCGATGGTGTGGAAGTAGATAT
TTCTGCAGCTACTGAGAGTGATATGGAGATTCAAGAAACCATTTCCATATCTCAAGATACCGAGACTCTTATCAATAATG
TAGAAAGCTTTGAAGAAAACTACAACGAAGCTATCAGTGCAATTGAAGACAAAACTGATGTTACAGTACTTGAAGATGAT
ACCCAAGAGGGTGAAGAAGAAGTTCAGTCCGGTGTTTTACAGGGAGATAGTACCCTTAACAATATTACCAATAATCTCAG
AAGAGCTATTACAGATCCGGTAGATGTCAGTGATCAAGATATAGAAGTTGATGGTAATGAAGTAGATGAATTAGTTCCTG
CACACTTCGGTATTGAAATTGGCGGTGACACTGTAGCTGGTGGCTCTTACAGCGGAGCTGATGCCAACGAGCTCACTATC
GATTACGATAGATTAGAAGAACAGCTCCAGGAAAATCCCGAAGCAGTACAAGCTCTATTCGCCAATGACGGCGAAGGCGG
CGGAGAAGGAATAGCCGTTCGCATGGAAGAGTACTTGGATGGCGTGGTTTACGACGGTGAACTGGACTCTACTGGACTTC
GAAATCAAACCCAAGACCAGAATCAAAGTGTTATCGAGAACCGGCTTACCACCGAAGCCAATGAAATTGAACGCACTGAA
AGCAGAATAGATACTATTGAAGACCGGGCGGAAATGCGTGAAGAACAACTTTGGTCACAATTCACAGCTATGGAAGAAGG
AATACAAAGCGCTCAGGCTGAATCACAGTCTCTAATGCAGGCTATGGGAGGCGGTATGGGCGGAATGATGATGTAA

Upstream 100 bases:

>100_bases
GAGATTCCCCCGGAAAAGATCCTGGATATAATAGCAGGACTTAAGGAGGTTGTTGGCCTCATTGTAGATGAAGAGGCCTG
AGTCATAAGGAGGTGAGAGC

Downstream 100 bases:

>100_bases
GGTGCTCATACCACATAAATGCAACACTGAAAGGGGGTCTTATGCTTGTACGGGCAAAATCCTTATAACAACTACAAGGA
AACTCAAATTAAGACGGCAA

Product: flagellar hook-associated 2 domain protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MRLGGLATGFDTENLVKQLAELERQPIQRHEQDIQEIEGVKDAWRNVNKLLSGVSDELSGLQSEDTFQGMEASSTNENIE
VSADNQAVEADYAFEIQQKAQNQRLASLDTINNVENEDGHKGTLTFDFGDEEFDIKVDESDTIQDIADKINNNEIENNDD
KTIPMGATVIAGEYLEFNIDEGYELENIEADNEEKADNDGDSDLLGWLQLDADIKNDDEENNDVNEDDREVLQVQESQNA
KVIVNGIQGIESSTNEIEIADGVEVDISAATESDMEIQETISISQDTETLINNVESFEENYNEAISAIEDKTDVTVLEDD
TQEGEEEVQSGVLQGDSTLNNITNNLRRAITDPVDVSDQDIEVDGNEVDELVPAHFGIEIGGDTVAGGSYSGADANELTI
DYDRLEEQLQENPEAVQALFANDGEGGGEGIAVRMEEYLDGVVYDGELDSTGLRNQTQDQNQSVIENRLTTEANEIERTE
SRIDTIEDRAEMREEQLWSQFTAMEEGIQSAQAESQSLMQAMGGGMGGMMM

Sequences:

>Translated_531_residues
MRLGGLATGFDTENLVKQLAELERQPIQRHEQDIQEIEGVKDAWRNVNKLLSGVSDELSGLQSEDTFQGMEASSTNENIE
VSADNQAVEADYAFEIQQKAQNQRLASLDTINNVENEDGHKGTLTFDFGDEEFDIKVDESDTIQDIADKINNNEIENNDD
KTIPMGATVIAGEYLEFNIDEGYELENIEADNEEKADNDGDSDLLGWLQLDADIKNDDEENNDVNEDDREVLQVQESQNA
KVIVNGIQGIESSTNEIEIADGVEVDISAATESDMEIQETISISQDTETLINNVESFEENYNEAISAIEDKTDVTVLEDD
TQEGEEEVQSGVLQGDSTLNNITNNLRRAITDPVDVSDQDIEVDGNEVDELVPAHFGIEIGGDTVAGGSYSGADANELTI
DYDRLEEQLQENPEAVQALFANDGEGGGEGIAVRMEEYLDGVVYDGELDSTGLRNQTQDQNQSVIENRLTTEANEIERTE
SRIDTIEDRAEMREEQLWSQFTAMEEGIQSAQAESQSLMQAMGGGMGGMMM
>Mature_531_residues
MRLGGLATGFDTENLVKQLAELERQPIQRHEQDIQEIEGVKDAWRNVNKLLSGVSDELSGLQSEDTFQGMEASSTNENIE
VSADNQAVEADYAFEIQQKAQNQRLASLDTINNVENEDGHKGTLTFDFGDEEFDIKVDESDTIQDIADKINNNEIENNDD
KTIPMGATVIAGEYLEFNIDEGYELENIEADNEEKADNDGDSDLLGWLQLDADIKNDDEENNDVNEDDREVLQVQESQNA
KVIVNGIQGIESSTNEIEIADGVEVDISAATESDMEIQETISISQDTETLINNVESFEENYNEAISAIEDKTDVTVLEDD
TQEGEEEVQSGVLQGDSTLNNITNNLRRAITDPVDVSDQDIEVDGNEVDELVPAHFGIEIGGDTVAGGSYSGADANELTI
DYDRLEEQLQENPEAVQALFANDGEGGGEGIAVRMEEYLDGVVYDGELDSTGLRNQTQDQNQSVIENRLTTEANEIERTE
SRIDTIEDRAEMREEQLWSQFTAMEEGIQSAQAESQSLMQAMGGGMGGMMM

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 58594; Mature: 58594

Theoretical pI: Translated: 3.50; Mature: 3.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGGLATGFDTENLVKQLAELERQPIQRHEQDIQEIEGVKDAWRNVNKLLSGVSDELSG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC
LQSEDTFQGMEASSTNENIEVSADNQAVEADYAFEIQQKAQNQRLASLDTINNVENEDGH
CCCCHHHCCCCCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KGTLTFDFGDEEFDIKVDESDTIQDIADKINNNEIENNDDKTIPMGATVIAGEYLEFNID
CEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEECCCCCEEECCEEEEECC
EGYELENIEADNEEKADNDGDSDLLGWLQLDADIKNDDEENNDVNEDDREVLQVQESQNA
CCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
KVIVNGIQGIESSTNEIEIADGVEVDISAATESDMEIQETISISQDTETLINNVESFEEN
EEEEECHHCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
YNEAISAIEDKTDVTVLEDDTQEGEEEVQSGVLQGDSTLNNITNNLRRAITDPVDVSDQD
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
IEVDGNEVDELVPAHFGIEIGGDTVAGGSYSGADANELTIDYDRLEEQLQENPEAVQALF
EECCCCHHHHHHHHHCCEEECCCEECCCCCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHH
ANDGEGGGEGIAVRMEEYLDGVVYDGELDSTGLRNQTQDQNQSVIENRLTTEANEIERTE
HCCCCCCCCCEEEEEHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
SRIDTIEDRAEMREEQLWSQFTAMEEGIQSAQAESQSLMQAMGGGMGGMMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLGGLATGFDTENLVKQLAELERQPIQRHEQDIQEIEGVKDAWRNVNKLLSGVSDELSG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC
LQSEDTFQGMEASSTNENIEVSADNQAVEADYAFEIQQKAQNQRLASLDTINNVENEDGH
CCCCHHHCCCCCCCCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KGTLTFDFGDEEFDIKVDESDTIQDIADKINNNEIENNDDKTIPMGATVIAGEYLEFNID
CEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEECCCCCEEECCEEEEECC
EGYELENIEADNEEKADNDGDSDLLGWLQLDADIKNDDEENNDVNEDDREVLQVQESQNA
CCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
KVIVNGIQGIESSTNEIEIADGVEVDISAATESDMEIQETISISQDTETLINNVESFEEN
EEEEECHHCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
YNEAISAIEDKTDVTVLEDDTQEGEEEVQSGVLQGDSTLNNITNNLRRAITDPVDVSDQD
HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
IEVDGNEVDELVPAHFGIEIGGDTVAGGSYSGADANELTIDYDRLEEQLQENPEAVQALF
EECCCCHHHHHHHHHCCEEECCCEECCCCCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHH
ANDGEGGGEGIAVRMEEYLDGVVYDGELDSTGLRNQTQDQNQSVIENRLTTEANEIERTE
HCCCCCCCCCEEEEEHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
SRIDTIEDRAEMREEQLWSQFTAMEEGIQSAQAESQSLMQAMGGGMGGMMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]