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The map label for this gene is dpsA [H]

Identifier: 188586774

GI number: 188586774

Start: 2292934

End: 2293626

Strand: Direct

Name: dpsA [H]

Synonym: Nther_2165

Alternate gene names: 188586774

Gene position: 2292934-2293626 (Clockwise)

Preceding gene: 188586772

Following gene: 188586781

Centisome position: 72.43

GC content: 42.57

Gene sequence:

>693_bases
TTGGAAGATACTAAAGTTCAACTGTCCAATAGGGTTCCTCAAGACAACCACGATGGAAACTTTAACTTGCAGACATCAGG
TATGGATACCACAATGCCAGGACATTCAAGCAATCACTCAATGATTACCCGGCAAGAACCACGGACAGAAAAGCCCTATC
GAGATCTGGCCTGTGGAATTAATCTACCCTTTAATACCAGACAAGAAATGGGCTTAATGTTAGACGACCATCAGTGCGCT
TTGACAGTAGTATTGCATCAGTACAATAAACATCACTGGCTAACAGAAGGTGCTGAGTCCTTTTTAAGTCTTCACCATTT
ATTGGAGGAACACATCCATAAGACCCAGGAACACATCGATAAAATTGGTGAAAGAGTAGCCCGCCTGGGAGTAGTGCCAA
CTGCTCACCCTGAGACCCAACATCAAATTTCTTATATTAAGCACGAGATAGAGGGTCGCTACTCGATGAGGGATTTCTTG
CGAAACGATTTAGAAAATGAACTAAAACTACAAGAAATGCTGCGAAAAACTATCGGCAGGGCTCATGAAATTCAGGACTA
CGGTACAGTGGAAGTTCTTGAGGAAATCCTTGTAGATAGAGAAGACTTAGGATATCACCTGTTTAGCGTCCTGGAAGACG
ACACATTAGTTCAAAAGTCAGCTCTGGGATTCAGCAATCGAGCTGATTATTAA

Upstream 100 bases:

>100_bases
AGCTATAATATTGGTTATAACTACCATAGTATATTATATCATTTTTTTACAAAAGCTATCAGTGGATTTAAATACACTAC
TACAAGAGAGGAGGGATATT

Downstream 100 bases:

>100_bases
GAGAAAAAAGTGAAAGTTTAATCAAGATCATGTTAATAATTATTGAACCTTAGTTAAATTTTTATTAAGCTTTACTGAAT
TAAACCAAATACTTCAAATA

Product: Ferritin Dps family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MEDTKVQLSNRVPQDNHDGNFNLQTSGMDTTMPGHSSNHSMITRQEPRTEKPYRDLACGINLPFNTRQEMGLMLDDHQCA
LTVVLHQYNKHHWLTEGAESFLSLHHLLEEHIHKTQEHIDKIGERVARLGVVPTAHPETQHQISYIKHEIEGRYSMRDFL
RNDLENELKLQEMLRKTIGRAHEIQDYGTVEVLEEILVDREDLGYHLFSVLEDDTLVQKSALGFSNRADY

Sequences:

>Translated_230_residues
MEDTKVQLSNRVPQDNHDGNFNLQTSGMDTTMPGHSSNHSMITRQEPRTEKPYRDLACGINLPFNTRQEMGLMLDDHQCA
LTVVLHQYNKHHWLTEGAESFLSLHHLLEEHIHKTQEHIDKIGERVARLGVVPTAHPETQHQISYIKHEIEGRYSMRDFL
RNDLENELKLQEMLRKTIGRAHEIQDYGTVEVLEEILVDREDLGYHLFSVLEDDTLVQKSALGFSNRADY
>Mature_230_residues
MEDTKVQLSNRVPQDNHDGNFNLQTSGMDTTMPGHSSNHSMITRQEPRTEKPYRDLACGINLPFNTRQEMGLMLDDHQCA
LTVVLHQYNKHHWLTEGAESFLSLHHLLEEHIHKTQEHIDKIGERVARLGVVPTAHPETQHQISYIKHEIEGRYSMRDFL
RNDLENELKLQEMLRKTIGRAHEIQDYGTVEVLEEILVDREDLGYHLFSVLEDDTLVQKSALGFSNRADY

Specific function: Involved in protection of chromosomal DNA from damage under nutrient-limited and oxidative stress conditions. Binds heme [H]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 26688; Mature: 26688

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDTKVQLSNRVPQDNHDGNFNLQTSGMDTTMPGHSSNHSMITRQEPRTEKPYRDLACGI
CCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCC
NLPFNTRQEMGLMLDDHQCALTVVLHQYNKHHWLTEGAESFLSLHHLLEEHIHKTQEHID
CCCCCCHHHCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGERVARLGVVPTAHPETQHQISYIKHEIEGRYSMRDFLRNDLENELKLQEMLRKTIGR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHEIQDYGTVEVLEEILVDREDLGYHLFSVLEDDTLVQKSALGFSNRADY
HHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEDTKVQLSNRVPQDNHDGNFNLQTSGMDTTMPGHSSNHSMITRQEPRTEKPYRDLACGI
CCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCC
NLPFNTRQEMGLMLDDHQCALTVVLHQYNKHHWLTEGAESFLSLHHLLEEHIHKTQEHID
CCCCCCHHHCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGERVARLGVVPTAHPETQHQISYIKHEIEGRYSMRDFLRNDLENELKLQEMLRKTIGR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHEIQDYGTVEVLEEILVDREDLGYHLFSVLEDDTLVQKSALGFSNRADY
HHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]