Click here to switch to the map view.

The map label for this gene is 188586737

Identifier: 188586737

GI number: 188586737

Start: 2247464

End: 2248363

Strand: Reverse

Name: 188586737

Synonym: Nther_2127

Alternate gene names: NA

Gene position: 2248363-2247464 (Counterclockwise)

Preceding gene: 188586738

Following gene: 188586736

Centisome position: 71.03

GC content: 33.0

Gene sequence:

>900_bases
ATGGAGGAAAAATTAATTAAAATATCCCTATATGTAACGATTGTTTTTGCACTAGTCTCTTTTGTTTTGGGGATATTTTT
TCGTTCCCAAGTAATTGTTTTTGATGGTTTGTATTCTCTAATTGGTGTTGGGATTACCACCTTTTCTTTATATGCAGTCA
AATTTATGGGAAAACATGATTGGCGTAGATTTCCTTTTGGTAAAGATATTATTGAGCCCCTTGTTGTTATTGTAAATTAT
TGCATTATTTTACTCCTGGTAGCTGCTTCTTTAATAACTGCTATTATAGCTTTGTTCCGAGGTGGAAGAGAAATAATGCT
AGGGCCCAGTCTGGTTTATACTGCTATAGGTACCTTGATATGTGTGATTATGTATTTATACCTTAATAAAAAAAGTGCAA
GATTAAATTCCGAATTTGTTTCTGTTGAAGCAAATCAGTGGTATATGGATACTCTAGTCAGTGGTGGTATTTTAATTGGA
TTCATAATAGCTGTGATATTACAAAGAATACCTGCTTTACAAGCTTTGGTTTCTTATGTAGATCCGGTAATGGTTATTGT
TGTATCATTGTACTTTATGAAAGTACCAGTAATTGAAATTAAGACTGCTCTGAGGGAAGTTCTCGCTATGCCACCCAATG
GAAAGATAAGGCAACAAGTAGAGGAAGTGATTAAATATATTATCGACAAGTATAACATCATAGATTATTTGATCAGGGTT
GCTAAAGTTGGTAAAACTTTAAAAATTGAAGTTGATTTTGTTGTGGATGAAAACTCAGCAGCTCAATCAGTATACGAACA
AGATCAAATCCGCCAAGAAGTAAATGATAGAATTTCTGATATTGAATACGATAAATGGATAACCCTTTCTTTTACCAGTG
ATCGCAAGTGGATTATTTAG

Upstream 100 bases:

>100_bases
GGATTTAATGAAAATCTTGATGAATCAAAACAGGAACTGAAAAAATTTTTAAAGCGATCGCTGAACCAACGAGGTGATAT
TAAATATGAAGGATAGCTAT

Downstream 100 bases:

>100_bases
TTTGACATGGAGGTTTTTGGAACAGAATGAAGAATAGTCAGTATATCGGGTGATTTTAATTATACTAAGGGGGAATTATT
TATGGAACTTTACAAGGCTT

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux System Component; Cation Efflux Family Protein; Cation Transporter; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; Cation Efflux Pump; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Efflux Transporter Protein; CDF Family Transporter

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MEEKLIKISLYVTIVFALVSFVLGIFFRSQVIVFDGLYSLIGVGITTFSLYAVKFMGKHDWRRFPFGKDIIEPLVVIVNY
CIILLLVAASLITAIIALFRGGREIMLGPSLVYTAIGTLICVIMYLYLNKKSARLNSEFVSVEANQWYMDTLVSGGILIG
FIIAVILQRIPALQALVSYVDPVMVIVVSLYFMKVPVIEIKTALREVLAMPPNGKIRQQVEEVIKYIIDKYNIIDYLIRV
AKVGKTLKIEVDFVVDENSAAQSVYEQDQIRQEVNDRISDIEYDKWITLSFTSDRKWII

Sequences:

>Translated_299_residues
MEEKLIKISLYVTIVFALVSFVLGIFFRSQVIVFDGLYSLIGVGITTFSLYAVKFMGKHDWRRFPFGKDIIEPLVVIVNY
CIILLLVAASLITAIIALFRGGREIMLGPSLVYTAIGTLICVIMYLYLNKKSARLNSEFVSVEANQWYMDTLVSGGILIG
FIIAVILQRIPALQALVSYVDPVMVIVVSLYFMKVPVIEIKTALREVLAMPPNGKIRQQVEEVIKYIIDKYNIIDYLIRV
AKVGKTLKIEVDFVVDENSAAQSVYEQDQIRQEVNDRISDIEYDKWITLSFTSDRKWII
>Mature_299_residues
MEEKLIKISLYVTIVFALVSFVLGIFFRSQVIVFDGLYSLIGVGITTFSLYAVKFMGKHDWRRFPFGKDIIEPLVVIVNY
CIILLLVAASLITAIIALFRGGREIMLGPSLVYTAIGTLICVIMYLYLNKKSARLNSEFVSVEANQWYMDTLVSGGILIG
FIIAVILQRIPALQALVSYVDPVMVIVVSLYFMKVPVIEIKTALREVLAMPPNGKIRQQVEEVIKYIIDKYNIIDYLIRV
AKVGKTLKIEVDFVVDENSAAQSVYEQDQIRQEVNDRISDIEYDKWITLSFTSDRKWII

Specific function: Unknown

COG id: COG3965

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34000; Mature: 34000

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKLIKISLYVTIVFALVSFVLGIFFRSQVIVFDGLYSLIGVGITTFSLYAVKFMGKHD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WRRFPFGKDIIEPLVVIVNYCIILLLVAASLITAIIALFRGGREIMLGPSLVYTAIGTLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHH
CVIMYLYLNKKSARLNSEFVSVEANQWYMDTLVSGGILIGFIIAVILQRIPALQALVSYV
HHHHHHHHCCHHHHCCCHHEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
DPVMVIVVSLYFMKVPVIEIKTALREVLAMPPNGKIRQQVEEVIKYIIDKYNIIDYLIRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKVGKTLKIEVDFVVDENSAAQSVYEQDQIRQEVNDRISDIEYDKWITLSFTSDRKWII
HHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MEEKLIKISLYVTIVFALVSFVLGIFFRSQVIVFDGLYSLIGVGITTFSLYAVKFMGKHD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WRRFPFGKDIIEPLVVIVNYCIILLLVAASLITAIIALFRGGREIMLGPSLVYTAIGTLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHH
CVIMYLYLNKKSARLNSEFVSVEANQWYMDTLVSGGILIGFIIAVILQRIPALQALVSYV
HHHHHHHHCCHHHHCCCHHEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
DPVMVIVVSLYFMKVPVIEIKTALREVLAMPPNGKIRQQVEEVIKYIIDKYNIIDYLIRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKVGKTLKIEVDFVVDENSAAQSVYEQDQIRQEVNDRISDIEYDKWITLSFTSDRKWII
HHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA