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The map label for this gene is ydjA [C]

Identifier: 188586736

GI number: 188586736

Start: 2246852

End: 2247382

Strand: Reverse

Name: ydjA [C]

Synonym: Nther_2126

Alternate gene names: 188586736

Gene position: 2247382-2246852 (Counterclockwise)

Preceding gene: 188586737

Following gene: 188586735

Centisome position: 70.99

GC content: 38.98

Gene sequence:

>531_bases
ATGGAACTTTACAAGGCTTTGCATGAAAGAAGAAGTGTACGGAAATATACAGATGATCCAGTTCCAGAAGAGAAATTATC
TAAAATTCTGGAAGCTGCTAGAATTGCACCATCATGGGCAAATAAACAATGCTGGCGTTATATTGTAATAAAAGATGAAG
GGAAGAAAGAAGAGCTATATTCGGCATTATCAGAGAAAAACCCTGGAGCAAAAGCATTAACTCAAGCCCCGGTAGCTGTA
ATACTTTGTGCCGATCCTGAAGCTTCGGGTAAACTAAACGATAAAGAGTATTACATGCTAGATGCCGGAATTTCCATGCA
ACAAATGATGTTAGCAGCCCATGCCGAAGGACTAGGTACTTGTTGGATTGGCTGGATCGATGATGAAAAAAGAATTCGAG
ATACTTTTAAAATTCCAGAAAACATAGAAGTAGTTGGTATTACACCACTAGGATATCCAGCCAAAGAATCCAAGCCTACT
CCGAGAAAGGATATGTCAGAAATCGTATTTTATGAAGAATGGGGCCAATAA

Upstream 100 bases:

>100_bases
TCGCAAGTGGATTATTTAGTTTGACATGGAGGTTTTTGGAACAGAATGAAGAATAGTCAGTATATCGGGTGATTTTAATT
ATACTAAGGGGGAATTATTT

Downstream 100 bases:

>100_bases
GGCCCCATTTTCTTGATCACGGTAAAACTATAAAGCGACAAAAAACAAAAAACCGGATTATTAAAGCGGGGGATAGTACT
TGGCTAAATTTTTTGGTGGA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MELYKALHERRSVRKYTDDPVPEEKLSKILEAARIAPSWANKQCWRYIVIKDEGKKEELYSALSEKNPGAKALTQAPVAV
ILCADPEASGKLNDKEYYMLDAGISMQQMMLAAHAEGLGTCWIGWIDDEKRIRDTFKIPENIEVVGITPLGYPAKESKPT
PRKDMSEIVFYEEWGQ

Sequences:

>Translated_176_residues
MELYKALHERRSVRKYTDDPVPEEKLSKILEAARIAPSWANKQCWRYIVIKDEGKKEELYSALSEKNPGAKALTQAPVAV
ILCADPEASGKLNDKEYYMLDAGISMQQMMLAAHAEGLGTCWIGWIDDEKRIRDTFKIPENIEVVGITPLGYPAKESKPT
PRKDMSEIVFYEEWGQ
>Mature_176_residues
MELYKALHERRSVRKYTDDPVPEEKLSKILEAARIAPSWANKQCWRYIVIKDEGKKEELYSALSEKNPGAKALTQAPVAV
ILCADPEASGKLNDKEYYMLDAGISMQQMMLAAHAEGLGTCWIGWIDDEKRIRDTFKIPENIEVVGITPLGYPAKESKPT
PRKDMSEIVFYEEWGQ

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=166, Percent_Identity=29.5180722891566, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20022; Mature: 20022

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYKALHERRSVRKYTDDPVPEEKLSKILEAARIAPSWANKQCWRYIVIKDEGKKEELY
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHH
SALSEKNPGAKALTQAPVAVILCADPEASGKLNDKEYYMLDAGISMQQMMLAAHAEGLGT
HHHHCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCE
CWIGWIDDEKRIRDTFKIPENIEVVGITPLGYPAKESKPTPRKDMSEIVFYEEWGQ
EEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHEEHHHCCCC
>Mature Secondary Structure
MELYKALHERRSVRKYTDDPVPEEKLSKILEAARIAPSWANKQCWRYIVIKDEGKKEELY
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHH
SALSEKNPGAKALTQAPVAVILCADPEASGKLNDKEYYMLDAGISMQQMMLAAHAEGLGT
HHHHCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCE
CWIGWIDDEKRIRDTFKIPENIEVVGITPLGYPAKESKPTPRKDMSEIVFYEEWGQ
EEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]