Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

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The map label for this gene is bfr [H]

Identifier: 188586697

GI number: 188586697

Start: 2207432

End: 2207941

Strand: Direct

Name: bfr [H]

Synonym: Nther_2087

Alternate gene names: 188586697

Gene position: 2207432-2207941 (Clockwise)

Preceding gene: 188586696

Following gene: 188586698

Centisome position: 69.73

GC content: 35.49

Gene sequence:

>510_bases
ATGAGTAAGCAAAATCGTGAGCAAAAGAAACAAAAAGTAATTGAGGTGTTGAACAAAGCACGATCTATGGAATTACAGGC
AATCCATCAATATATGAACCAACATTATTCTCTAGATGACAAAGATTACGGTGAATTTGCTACTAAAATTAGAACCATTG
CCATTGACGAAATGAGACATGCAGAGACCTTTGCAGAACGTGTTAAAGAACTAGATGGAGAACCTACCACTGAATTAGCT
GGTGGAGTTGAAAAAAATCAAGATGTAGAAAAGATTTTCCCTTTCGATTCTGAACAAGAAGAAGAAGCTATCGAAACATA
CAATGAATTTGCTCAAATCTGCAGAGAAAATAATGATACAATTTCAGCTAAGCTGTTCGAAACAATCATTGAAGAAGAAC
AACAACATCAAAATTACTTCGATGATATTGACGACCACATCAAAAACTTAGGTAATACATACCTGGCTAGAATGGTTGGA
ACTGCAGAAGGAGAAGGTGGAGAAGAATAA

Upstream 100 bases:

>100_bases
TTAATTTTCAAATACTAAGGAAGGATTATAAAATGTGAAAATAGAAATACTTGGATTAGATGAAAATATTTTTTCAATAT
AGGTTAAAGGAGGAGTTTTA

Downstream 100 bases:

>100_bases
CTACCAAAAGCAAAAGGCCTGGACTAAAAAGTCCAGGCTTTTTTTATTCAAGATTTCTGAACCGTGAACCGTGAATGTCG
GACATTGTAAAAAGCTAAAA

Product: Ferritin Dps family protein

Products: NA

Alternate protein names: BFR [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRHAETFAERVKELDGEPTTELA
GGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDTISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVG
TAEGEGGEE

Sequences:

>Translated_169_residues
MSKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRHAETFAERVKELDGEPTTELA
GGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDTISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVG
TAEGEGGEE
>Mature_168_residues
SKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRHAETFAERVKELDGEPTTELAG
GVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDTISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVGT
AEGEGGEE

Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]

COG id: COG2193

COG function: function code P; Bacterioferritin (cytochrome b1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

None

Paralogues:

None

Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002024
- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 19628; Mature: 19497

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AETFAERVKELDGEPTTELAGGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDT
HHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
ISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVGTAEGEGGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SKQNREQKKQKVIEVLNKARSMELQAIHQYMNQHYSLDDKDYGEFATKIRTIAIDEMRH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AETFAERVKELDGEPTTELAGGVEKNQDVEKIFPFDSEQEEEAIETYNEFAQICRENNDT
HHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
ISAKLFETIIEEEQQHQNYFDDIDDHIKNLGNTYLARMVGTAEGEGGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11454214; 10841764; 11034331; 11173495; 12627224 [H]