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The map label for this gene is 188586688

Identifier: 188586688

GI number: 188586688

Start: 2197651

End: 2198850

Strand: Direct

Name: 188586688

Synonym: Nther_2078

Alternate gene names: NA

Gene position: 2197651-2198850 (Clockwise)

Preceding gene: 188586685

Following gene: 188586696

Centisome position: 69.42

GC content: 39.08

Gene sequence:

>1200_bases
ATGTACTTTGTTGGGATTGATTGGGCTGATACAAAACATGATATCCTGGTCATGAGTGGCGATGGTAGAGAACTAGATAA
CTTCACTATTCAACATTCTCAAGATGGATTTGAAACTTTAGGAACTAAACTTCTGAAACATGACAACAATCCTGAAAACT
TCTGCTGCTTAATTGAAACCAAACATGGACTTTTAACTCAATATCTTTTAGAAAATAACTTCACTGTTTATTCTGTTAAC
CCCAAGCTAGTTGATGCTAGACGAAAAGCTTCCGGGGCTAAAACTGACTTTATTGATGCTAAAATACTAGCTAATATGGG
CAGATCAGAGCTCCATGACTTACATAAGCTAGAGCCTGATTCGGAACATATCCAAGAGCTTAAAGTACTCACCAGAGATC
AAGACGCCCTTATACAAGAAAGTACTAGGCTAACAAATAGGCTGATTTCAACACTGAAAGAATACTATCCTGTAGCTCTT
GAATTATTTTCTAAAATAACTCTACCTATCTCTCTAGCTTTCTTAAGAAAATATCCTACTCCAAAACAGGCTCGTAAAGC
TAGCAGAGATGATATCTACAAGTTTTTGAAAAAGCAAAATCATCCTAACCCTTTATCTAAAGCTAATGAAATATTCACAA
AGCTTCAAAGACGTAATTTAGAAGGTAACAGGGCTATTTGTTCTGCCAAGTCTAAGTTTTTATTTACTATCCTTGATCAG
CTAGAGCCTTTATTAGAGCACATTAAAGAGTATGACAGGGAAATTGAAAAACTTTTTAAGTCCCACTCTGACAGTAAACT
TTTTGAAAGCTTGCCAGGTGCCGGTAAGCGTATAGCACCGAGGCTGCTGGCAGAGTGGGGAGATGATAGAAGCCGTTATG
CTGACGCCTCGGTAGTCCAGGCCCTTGCGGGAACTTCACCAGTACTACATCAAAGTGGCAAAATGCGTATTGTGAAAAGG
CGGCATTCTTGTATTAAACCTTTTAGAAACGCTTTGCATCAATTTGCTCTTCAAACTGCGAGGTGGGTCCCCTGGGCCAG
AGATTATTACCTCAGAAAGCGAAAAGAAGGCAAACAGCATCATGAGGCTGCAAGGGCTCTAGCTAATATTTGGGTCAGGA
TACTCTATGCTATGTGGCTGAACAAAGAACCCTACAATGAAAACAAATTCTTAAAAGCTAGAGAAAAACACGCTGCTTAA

Upstream 100 bases:

>100_bases
AGTAGCAGTTACGGACTATAGAGAAGTTGTGCCTCGAGCACCGATGCTAGACGAGGATCACCACTGCTACTAAATACCAT
CACCTAAAGGAGGTCTTAAG

Downstream 100 bases:

>100_bases
TTAGTTTTTAAAAGAGCAAAATTTTAAATTTGGATTATTATATCCACTACTTCCAAATTTTTACATCAATCTACCCTTTA
CATAGAGAATCTTGAATACC

Product: transposase IS111A/IS1328/IS1533

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MYFVGIDWADTKHDILVMSGDGRELDNFTIQHSQDGFETLGTKLLKHDNNPENFCCLIETKHGLLTQYLLENNFTVYSVN
PKLVDARRKASGAKTDFIDAKILANMGRSELHDLHKLEPDSEHIQELKVLTRDQDALIQESTRLTNRLISTLKEYYPVAL
ELFSKITLPISLAFLRKYPTPKQARKASRDDIYKFLKKQNHPNPLSKANEIFTKLQRRNLEGNRAICSAKSKFLFTILDQ
LEPLLEHIKEYDREIEKLFKSHSDSKLFESLPGAGKRIAPRLLAEWGDDRSRYADASVVQALAGTSPVLHQSGKMRIVKR
RHSCIKPFRNALHQFALQTARWVPWARDYYLRKRKEGKQHHEAARALANIWVRILYAMWLNKEPYNENKFLKAREKHAA

Sequences:

>Translated_399_residues
MYFVGIDWADTKHDILVMSGDGRELDNFTIQHSQDGFETLGTKLLKHDNNPENFCCLIETKHGLLTQYLLENNFTVYSVN
PKLVDARRKASGAKTDFIDAKILANMGRSELHDLHKLEPDSEHIQELKVLTRDQDALIQESTRLTNRLISTLKEYYPVAL
ELFSKITLPISLAFLRKYPTPKQARKASRDDIYKFLKKQNHPNPLSKANEIFTKLQRRNLEGNRAICSAKSKFLFTILDQ
LEPLLEHIKEYDREIEKLFKSHSDSKLFESLPGAGKRIAPRLLAEWGDDRSRYADASVVQALAGTSPVLHQSGKMRIVKR
RHSCIKPFRNALHQFALQTARWVPWARDYYLRKRKEGKQHHEAARALANIWVRILYAMWLNKEPYNENKFLKAREKHAA
>Mature_399_residues
MYFVGIDWADTKHDILVMSGDGRELDNFTIQHSQDGFETLGTKLLKHDNNPENFCCLIETKHGLLTQYLLENNFTVYSVN
PKLVDARRKASGAKTDFIDAKILANMGRSELHDLHKLEPDSEHIQELKVLTRDQDALIQESTRLTNRLISTLKEYYPVAL
ELFSKITLPISLAFLRKYPTPKQARKASRDDIYKFLKKQNHPNPLSKANEIFTKLQRRNLEGNRAICSAKSKFLFTILDQ
LEPLLEHIKEYDREIEKLFKSHSDSKLFESLPGAGKRIAPRLLAEWGDDRSRYADASVVQALAGTSPVLHQSGKMRIVKR
RHSCIKPFRNALHQFALQTARWVPWARDYYLRKRKEGKQHHEAARALANIWVRILYAMWLNKEPYNENKFLKAREKHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 46289; Mature: 46289

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFVGIDWADTKHDILVMSGDGRELDNFTIQHSQDGFETLGTKLLKHDNNPENFCCLIET
CEEEEECCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEC
KHGLLTQYLLENNFTVYSVNPKLVDARRKASGAKTDFIDAKILANMGRSELHDLHKLEPD
CHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCC
SEHIQELKVLTRDQDALIQESTRLTNRLISTLKEYYPVALELFSKITLPISLAFLRKYPT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKQARKASRDDIYKFLKKQNHPNPLSKANEIFTKLQRRNLEGNRAICSAKSKFLFTILDQ
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LEPLLEHIKEYDREIEKLFKSHSDSKLFESLPGAGKRIAPRLLAEWGDDRSRYADASVVQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
ALAGTSPVLHQSGKMRIVKRRHSCIKPFRNALHQFALQTARWVPWARDYYLRKRKEGKQH
HHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHH
HEAARALANIWVRILYAMWLNKEPYNENKFLKAREKHAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MYFVGIDWADTKHDILVMSGDGRELDNFTIQHSQDGFETLGTKLLKHDNNPENFCCLIET
CEEEEECCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEC
KHGLLTQYLLENNFTVYSVNPKLVDARRKASGAKTDFIDAKILANMGRSELHDLHKLEPD
CHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCC
SEHIQELKVLTRDQDALIQESTRLTNRLISTLKEYYPVALELFSKITLPISLAFLRKYPT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKQARKASRDDIYKFLKKQNHPNPLSKANEIFTKLQRRNLEGNRAICSAKSKFLFTILDQ
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LEPLLEHIKEYDREIEKLFKSHSDSKLFESLPGAGKRIAPRLLAEWGDDRSRYADASVVQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
ALAGTSPVLHQSGKMRIVKRRHSCIKPFRNALHQFALQTARWVPWARDYYLRKRKEGKQH
HHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHH
HEAARALANIWVRILYAMWLNKEPYNENKFLKAREKHAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2575701; 12000953 [H]