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The map label for this gene is 188586658

Identifier: 188586658

GI number: 188586658

Start: 2163651

End: 2164676

Strand: Reverse

Name: 188586658

Synonym: Nther_2048

Alternate gene names: NA

Gene position: 2164676-2163651 (Counterclockwise)

Preceding gene: 188586663

Following gene: 188586657

Centisome position: 68.38

GC content: 38.79

Gene sequence:

>1026_bases
ATGAGAGTTATCAATAGTATTATCAAAAAATGTGTTTTTGCTATACTTTTTGGCATGTTAGTTTTGGGAGTAACCGGTTG
TGCAGACAGCGAAGCTCAGGATGAGGTTGAACTAACTTTTGCAGATGCAGGATGGGAAAGTATTAGGGTACATAACTATA
TAGCAGGGATTATTTTGGAAGAAGGATATGGTGGATATAGACAAGATATAATGTCTGGATCTACACCGGTAACCTTTACT
GATTTACGCGGTGGCGGAATTGACATTTACATGGAAGTGTGGAAAGAAAATATCCAAGAGGAGTACAATGAAGCCCTAGA
AAAAGGTGAAATCCAGGTCCTGTCGATTAATTTTGATGACAACTTTCAAGGATTATATGTACCCACCTATGTTATAGAAG
GTGATGAGGACCGGGGAATCGATCCTATTGCGCCTAATTTAGAGTCTGTGTTTGATTTACCTGATTATTGGGAAGAGTTT
CAGGATCCGGAAGACCCGGATAAAGGCCGGATAATAGGGGCTCCCTCCGAATGGGCAGTAGATGAAATCCTTGAAATTAA
GGTAGAAACTTACGGATTAGATGAACACTTTAATTATGTGAGTCCTGGTTCAGAATCTACGTTGAATGCAACTATAATGG
ATGCCTATGAAAGTGGCGAACCAGTTGTGGCGTATAACTGGGAACCTACATGGATTATGGGTAAATATGACATGACTTTA
TTAGAAGAACCAGAATTTGATGAGGAAAAATATTACGAAGAAGGATATGGAACTGAAATTCCTTCTATGGACGTTACAGT
AGCAGTTAATTCTGATTTAGCAGAGGAACATCCCGAGGTAGTTGAGTTTTTGGAGAATTATGAGACTAGTAGTGAAGTAA
CAAGTGAAGCTTTGGCTTATACGGAAGAAGCTGATGCAGATGAACGAGGAGCAGCAAAATGGTTTTTAAGAGAATATGAA
GAGATTTGGACTGAATGGGTTAATGAAGAAGTGGCTGAAAATGTTAGAGAATATTTACAGCAATAA

Upstream 100 bases:

>100_bases
TAAGTTAATTTGAATTTCTTGTTAATTTTATATATAATTAATTAACGATTGGCAAAAAACAAAATAAAATAAAAAAATTA
AGGAGGAATGGATTTATAAT

Downstream 100 bases:

>100_bases
TTGTATTTTAATAATAAGCACATAGTGAGGTGAGATAAACACTGCTCCCGTTGTAATCACTTCTACGGGAGCAGTCACAA
TCTTATGAGAGAATTTCCTG

Product: Substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRVINSIIKKCVFAILFGMLVLGVTGCADSEAQDEVELTFADAGWESIRVHNYIAGIILEEGYGGYRQDIMSGSTPVTFT
DLRGGGIDIYMEVWKENIQEEYNEALEKGEIQVLSINFDDNFQGLYVPTYVIEGDEDRGIDPIAPNLESVFDLPDYWEEF
QDPEDPDKGRIIGAPSEWAVDEILEIKVETYGLDEHFNYVSPGSESTLNATIMDAYESGEPVVAYNWEPTWIMGKYDMTL
LEEPEFDEEKYYEEGYGTEIPSMDVTVAVNSDLAEEHPEVVEFLENYETSSEVTSEALAYTEEADADERGAAKWFLREYE
EIWTEWVNEEVAENVREYLQQ

Sequences:

>Translated_341_residues
MRVINSIIKKCVFAILFGMLVLGVTGCADSEAQDEVELTFADAGWESIRVHNYIAGIILEEGYGGYRQDIMSGSTPVTFT
DLRGGGIDIYMEVWKENIQEEYNEALEKGEIQVLSINFDDNFQGLYVPTYVIEGDEDRGIDPIAPNLESVFDLPDYWEEF
QDPEDPDKGRIIGAPSEWAVDEILEIKVETYGLDEHFNYVSPGSESTLNATIMDAYESGEPVVAYNWEPTWIMGKYDMTL
LEEPEFDEEKYYEEGYGTEIPSMDVTVAVNSDLAEEHPEVVEFLENYETSSEVTSEALAYTEEADADERGAAKWFLREYE
EIWTEWVNEEVAENVREYLQQ
>Mature_341_residues
MRVINSIIKKCVFAILFGMLVLGVTGCADSEAQDEVELTFADAGWESIRVHNYIAGIILEEGYGGYRQDIMSGSTPVTFT
DLRGGGIDIYMEVWKENIQEEYNEALEKGEIQVLSINFDDNFQGLYVPTYVIEGDEDRGIDPIAPNLESVFDLPDYWEEF
QDPEDPDKGRIIGAPSEWAVDEILEIKVETYGLDEHFNYVSPGSESTLNATIMDAYESGEPVVAYNWEPTWIMGKYDMTL
LEEPEFDEEKYYEEGYGTEIPSMDVTVAVNSDLAEEHPEVVEFLENYETSSEVTSEALAYTEEADADERGAAKWFLREYE
EIWTEWVNEEVAENVREYLQQ

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38883; Mature: 38883

Theoretical pI: Translated: 3.60; Mature: 3.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVINSIIKKCVFAILFGMLVLGVTGCADSEAQDEVELTFADAGWESIRVHNYIAGIILE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEHHHHEEEEEEE
EGYGGYRQDIMSGSTPVTFTDLRGGGIDIYMEVWKENIQEEYNEALEKGEIQVLSINFDD
CCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
NFQGLYVPTYVIEGDEDRGIDPIAPNLESVFDLPDYWEEFQDPEDPDKGRIIGAPSEWAV
CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCEECCCCHHHH
DEILEIKVETYGLDEHFNYVSPGSESTLNATIMDAYESGEPVVAYNWEPTWIMGKYDMTL
HHHHHEEHHEECCHHCCCCCCCCCCCCEEEEEEEHHCCCCCEEEECCCCCEEEECCCCEE
LEEPEFDEEKYYEEGYGTEIPSMDVTVAVNSDLAEEHPEVVEFLENYETSSEVTSEALAY
ECCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHCCHHHHHHHHCCCCHHHHHHHHHHH
TEEADADERGAAKWFLREYEEIWTEWVNEEVAENVREYLQQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRVINSIIKKCVFAILFGMLVLGVTGCADSEAQDEVELTFADAGWESIRVHNYIAGIILE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEHHHHEEEEEEE
EGYGGYRQDIMSGSTPVTFTDLRGGGIDIYMEVWKENIQEEYNEALEKGEIQVLSINFDD
CCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
NFQGLYVPTYVIEGDEDRGIDPIAPNLESVFDLPDYWEEFQDPEDPDKGRIIGAPSEWAV
CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCEECCCCHHHH
DEILEIKVETYGLDEHFNYVSPGSESTLNATIMDAYESGEPVVAYNWEPTWIMGKYDMTL
HHHHHEEHHEECCHHCCCCCCCCCCCCEEEEEEEHHCCCCCEEEECCCCCEEEECCCCEE
LEEPEFDEEKYYEEGYGTEIPSMDVTVAVNSDLAEEHPEVVEFLENYETSSEVTSEALAY
ECCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHCCHHHHHHHHCCCCHHHHHHHHHHH
TEEADADERGAAKWFLREYEEIWTEWVNEEVAENVREYLQQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA