| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586589
Identifier: 188586589
GI number: 188586589
Start: 2083890
End: 2084435
Strand: Direct
Name: 188586589
Synonym: Nther_1976
Alternate gene names: NA
Gene position: 2083890-2084435 (Clockwise)
Preceding gene: 188586588
Following gene: 188586591
Centisome position: 65.83
GC content: 37.36
Gene sequence:
>546_bases GTGGTGTATACGAGGCGTTCGACAATAAATGCCATTTTTCGAGGAGGTCTGGAAGTGTTTAGAAGCTGGTACGATGTAGC TGAAATATGTATGAATGGCCATGTCACAAATTCAAGCGTAAATAAGAACTCTCAACATTGTCAGGATTACTGTGAAAAAT GTGGAGAAAAAACAATTAGAGAATGCCAGGATTGTTCTACACCTATAAGAGGAAAACTTCATGTCGAAGGAGGATTTGGA TCTACTCACTATTATGCCCCAAGTTATTGTCACAAATGTGGAAATCCATTTCCTTGGACTGAAGCAACTCTAAAAGCCGC AAAAGAATTGGCTCAAGAAGTAGAAGAATTTAGTCAAGAAGATATTGATATTTTTACTGCTAGCTTAGATGATCTCATAG TAGATAATCCTCATACAAAGGTAGCGGCAGTTAAATTTAAAAAGATCCTGTCTAAAGCTCAACAGCCAATGAAAGATGCT ATTTACCAGTTACTTATTGACACTGTAAGCGAAACAGCGAGAAAAATTGTCTGGCCAGATATATAG
Upstream 100 bases:
>100_bases CGGGGAAAAAAACATTATCAAAATTACGGTTAAAATGCGGAGATACAATAAAAAATAATTTTTCAATCAATGGACAAGCC ATCTCAATAAGAGGTGGCTT
Downstream 100 bases:
>100_bases CAACAGTTATAATTCCTTGGCAACGCAGGAGTCGGCAAGATTTGATAAAATAATTAAGAAAAGAGGTGGTTACATGTCTG ATGACAAAATAAGATGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MVYTRRSTINAIFRGGLEVFRSWYDVAEICMNGHVTNSSVNKNSQHCQDYCEKCGEKTIRECQDCSTPIRGKLHVEGGFG STHYYAPSYCHKCGNPFPWTEATLKAAKELAQEVEEFSQEDIDIFTASLDDLIVDNPHTKVAAVKFKKILSKAQQPMKDA IYQLLIDTVSETARKIVWPDI
Sequences:
>Translated_181_residues MVYTRRSTINAIFRGGLEVFRSWYDVAEICMNGHVTNSSVNKNSQHCQDYCEKCGEKTIRECQDCSTPIRGKLHVEGGFG STHYYAPSYCHKCGNPFPWTEATLKAAKELAQEVEEFSQEDIDIFTASLDDLIVDNPHTKVAAVKFKKILSKAQQPMKDA IYQLLIDTVSETARKIVWPDI >Mature_181_residues MVYTRRSTINAIFRGGLEVFRSWYDVAEICMNGHVTNSSVNKNSQHCQDYCEKCGEKTIRECQDCSTPIRGKLHVEGGFG STHYYAPSYCHKCGNPFPWTEATLKAAKELAQEVEEFSQEDIDIFTASLDDLIVDNPHTKVAAVKFKKILSKAQQPMKDA IYQLLIDTVSETARKIVWPDI
Specific function: Unknown
COG id: COG4306
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20501; Mature: 20501
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYTRRSTINAIFRGGLEVFRSWYDVAEICMNGHVTNSSVNKNSQHCQDYCEKCGEKTIR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ECQDCSTPIRGKLHVEGGFGSTHYYAPSYCHKCGNPFPWTEATLKAAKELAQEVEEFSQE HHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH DIDIFTASLDDLIVDNPHTKVAAVKFKKILSKAQQPMKDAIYQLLIDTVSETARKIVWPD HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC I C >Mature Secondary Structure MVYTRRSTINAIFRGGLEVFRSWYDVAEICMNGHVTNSSVNKNSQHCQDYCEKCGEKTIR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ECQDCSTPIRGKLHVEGGFGSTHYYAPSYCHKCGNPFPWTEATLKAAKELAQEVEEFSQE HHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH DIDIFTASLDDLIVDNPHTKVAAVKFKKILSKAQQPMKDAIYQLLIDTVSETARKIVWPD HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA