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The map label for this gene is 188586539

Identifier: 188586539

GI number: 188586539

Start: 2023716

End: 2024999

Strand: Direct

Name: 188586539

Synonym: Nther_1925

Alternate gene names: NA

Gene position: 2023716-2024999 (Clockwise)

Preceding gene: 188586532

Following gene: 188586544

Centisome position: 63.93

GC content: 37.54

Gene sequence:

>1284_bases
ATGAAGTATACCCAAAATGAGAGAATTAATCAAGTAAAAGAGTCAAGTTTGATTATCGGAGTAGACATTGCAAAAGCAGA
ACACGTAGCAAGAGCTCAGGATTTTCGGGGTGTGGAGTTTTCGAAACCAATCACCTTTGAAAACACCAGGAAAGGTTTTA
AGAAGTTTTTAAGTTGGCTAGAGGTAATCAAACAAGAACAAGCAAAAGAAGAAGTCTTAGTAGGTATGGAACCTACTGGC
CAATACTGGCTGACTCTAGCTCAATTTTTAAAGCAAACAGGTATCCAAACTATTTTAGTAAATCCAAATCACGTAAAGAA
AAGCAAAGAACTAGACGACAACTCACCAACTAAAAATGATATTAAAGATGCAAAAGTGATAGCACAGTTAGTAAAAGATG
GCCGTTACTCAGTACCCAATATCCCTACAGGAATATATGCAGAACTACGGAATGGGATGAATTTGCGAGATCGGCTAACA
GATGACTTAAGGCGTGTAAAAGGTAGGGTAGACAATTGGTTAGATCGCTACTTCCCAGAATTCAGCACAGTGTTTAAGAA
CTGGGATGGAAAAGCAGCACTATTAACTTTAAAAAAATTTCCCCTACCAAAAGAAATATTAGGTCATAGTGAAGAAGAGA
TAGTAAGTTGCTGGAAACAAGAAGTAAATCGAGCAGTAGGTAAAAAAAGAGCAAAAAAGCTGAAAGAAGCAGCCCAAAAC
AGTACTGGGCTAACAGAAGGCGAGATAATGGCAAGACAAGAATTGAAAACCCTATTGTCGCAGTATGACGCTTTAATAGA
AGAGTTAGAACAAGTACTTGTTCAGATAGAAAATATTTTAAAAGAAATTCCAGGAGCAGAAGAAATGATGAGTATTCCTG
GAGTAGGGATGGTAACAGTGGCAGGATTTTTGGCTGAAGTGGGTGATCTTTCTAATTATCAACATCCAAATCAAATTAAG
AAGCTGGCAGGCTTAAATCTAAAAGAGAACAGTTCAGGTAAGCACAAAGGTGAAACCAAGATAACCAAACGAGGTCGACC
TCGTTTGAGAGGACTCTTATATCGCTGCGTGATTCCATTAGTAGCCAAAAACCCTGAATTTAAGTTATTACACGATTATT
ATACCACAAGGCCAGAAAATCCCTTAAAAAAGAAACAATCGCTTGTAGCATTAGCGTGTAGATTGATCAGAGTTTTGTTT
GCCCTAGGTACCAAAAAGACACCTTATAATGGCAGGATGATGTTAAAGAACAGTTCATTAAATTTATTGCAGGATGCTGC
ATAA

Upstream 100 bases:

>100_bases
TAAAATGAAGATTGATAAAAAAAGTACCTCCTGCTAATATACGAGGTGTCGCTACACCTAGAAATGACGACCCTTAATTT
AAGCAGAGGAGGTACTTACC

Downstream 100 bases:

>100_bases
GCAGCCAAATTGGAGTCTTAAGAATTTATACTACATCCACAAAAGGAGCACGGAGAAGCCAGTCATAATAATCCATTCGG
GCATTGACCCTGCTAAGGAG

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKYTQNERINQVKESSLIIGVDIAKAEHVARAQDFRGVEFSKPITFENTRKGFKKFLSWLEVIKQEQAKEEVLVGMEPTG
QYWLTLAQFLKQTGIQTILVNPNHVKKSKELDDNSPTKNDIKDAKVIAQLVKDGRYSVPNIPTGIYAELRNGMNLRDRLT
DDLRRVKGRVDNWLDRYFPEFSTVFKNWDGKAALLTLKKFPLPKEILGHSEEEIVSCWKQEVNRAVGKKRAKKLKEAAQN
STGLTEGEIMARQELKTLLSQYDALIEELEQVLVQIENILKEIPGAEEMMSIPGVGMVTVAGFLAEVGDLSNYQHPNQIK
KLAGLNLKENSSGKHKGETKITKRGRPRLRGLLYRCVIPLVAKNPEFKLLHDYYTTRPENPLKKKQSLVALACRLIRVLF
ALGTKKTPYNGRMMLKNSSLNLLQDAA

Sequences:

>Translated_427_residues
MKYTQNERINQVKESSLIIGVDIAKAEHVARAQDFRGVEFSKPITFENTRKGFKKFLSWLEVIKQEQAKEEVLVGMEPTG
QYWLTLAQFLKQTGIQTILVNPNHVKKSKELDDNSPTKNDIKDAKVIAQLVKDGRYSVPNIPTGIYAELRNGMNLRDRLT
DDLRRVKGRVDNWLDRYFPEFSTVFKNWDGKAALLTLKKFPLPKEILGHSEEEIVSCWKQEVNRAVGKKRAKKLKEAAQN
STGLTEGEIMARQELKTLLSQYDALIEELEQVLVQIENILKEIPGAEEMMSIPGVGMVTVAGFLAEVGDLSNYQHPNQIK
KLAGLNLKENSSGKHKGETKITKRGRPRLRGLLYRCVIPLVAKNPEFKLLHDYYTTRPENPLKKKQSLVALACRLIRVLF
ALGTKKTPYNGRMMLKNSSLNLLQDAA
>Mature_427_residues
MKYTQNERINQVKESSLIIGVDIAKAEHVARAQDFRGVEFSKPITFENTRKGFKKFLSWLEVIKQEQAKEEVLVGMEPTG
QYWLTLAQFLKQTGIQTILVNPNHVKKSKELDDNSPTKNDIKDAKVIAQLVKDGRYSVPNIPTGIYAELRNGMNLRDRLT
DDLRRVKGRVDNWLDRYFPEFSTVFKNWDGKAALLTLKKFPLPKEILGHSEEEIVSCWKQEVNRAVGKKRAKKLKEAAQN
STGLTEGEIMARQELKTLLSQYDALIEELEQVLVQIENILKEIPGAEEMMSIPGVGMVTVAGFLAEVGDLSNYQHPNQIK
KLAGLNLKENSSGKHKGETKITKRGRPRLRGLLYRCVIPLVAKNPEFKLLHDYYTTRPENPLKKKQSLVALACRLIRVLF
ALGTKKTPYNGRMMLKNSSLNLLQDAA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 48499; Mature: 48499

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHCCC
>Mature Secondary Structure
MKYTQNERINQVKESSLIIGVDIAKAEHVARAQDFRGVEFSKPITFENTRKGFKKFLSWL
CCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
EVIKQEQAKEEVLVGMEPTGQYWLTLAQFLKQTGIQTILVNPNHVKKSKELDDNSPTKND
HHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCHHH
IKDAKVIAQLVKDGRYSVPNIPTGIYAELRNGMNLRDRLTDDLRRVKGRVDNWLDRYFPE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSTVFKNWDGKAALLTLKKFPLPKEILGHSEEEIVSCWKQEVNRAVGKKRAKKLKEAAQN
HHHHHHCCCCCEEEEEHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STGLTEGEIMARQELKTLLSQYDALIEELEQVLVQIENILKEIPGAEEMMSIPGVGMVTV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHH
AGFLAEVGDLSNYQHPNQIKKLAGLNLKENSSGKHKGETKITKRGRPRLRGLLYRCVIPL
HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH
VAKNPEFKLLHDYYTTRPENPLKKKQSLVALACRLIRVLFALGTKKTPYNGRMMLKNSSL
HCCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
NLLQDAA
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1700062 [H]