| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586420
Identifier: 188586420
GI number: 188586420
Start: 1869276
End: 1870208
Strand: Direct
Name: 188586420
Synonym: Nther_1805
Alternate gene names: NA
Gene position: 1869276-1870208 (Clockwise)
Preceding gene: 188586384
Following gene: 188586427
Centisome position: 59.05
GC content: 35.37
Gene sequence:
>933_bases ATGTCAGAACAAGTTGAGATGCCTGATTTTCCTGTTATAGATTTTCACATTCATCTACCTGTACAACGAAAAAAACCAAA TAAGTCACGATCAAGTCACCCAGCTATACAAAATCATAGAAAGAAATTACAAGAAAAATTTTTTGAGAAATGGGGATTTG ATAAACCTAATGGTGAAGTCTACAGTCCTGAGAAGGTTGCAGAGCTTTGGTACAAAGAAAAAGAATATTATGGTCTAGAA AAAGTTAATGCCGTTACAGCAGGTTTTGATAATGATACTTTAGCAAATATAATTAGCTTATATCCCGAATCTTTTATTGG TTTTACACATCACGATATTCAAGAATCTAATTCATTTGAGGAATTACAACGGGGCATAGAAGAATTGGGATTATCGGGTC ATAAAATGTTAGCACCATTTATGGAACGTCCCTTTAACGACCCCGAATTTGAACCTTTTTGGAAATATCTTAATGATAAT AAACTGCCAGTGATAATTCACTTTGGAATTGTTGGAGGCCCCGGCGGTTTAGCCACTTATAAATATATAAATCCCTTTTC AATTTTTGAAGTAGCCCGTTCATATCCCGATATTCCAATAATCATTCCTCATTTTGGAGCAGGCTATTTCCAAGAAGTGC TCCACCTAGCTTGGAGCCTTCCCAATATTTACGTTGATTCATCTGGATCCAATCAATGGCTTGACTGGATGGTTTATGAC ATGAGTTTAAAAGACGTATTCAAAAAGTCATTAAAAACTCTAGGGCCAGAAAGAATGATTTTTGGAACAGATTCTAGTTG GTTCCCAAGAGGATTTAGCTATAAATACCTAAAAGTCCAATGGAAAATTCTAGAGGACCTTGGTGTCAGTAAAAAAGACC AAGAACTCTTTTTCTCTGGAAATGCTAACAGGCTTTTAAATAACTCACTTTAG
Upstream 100 bases:
>100_bases TTTTTGGTTTTAACTTTGCGAGTGTAACTCATCTATGCTAGTATGAGTACTGATTAATAAATCTCGGAATGTAAATATAT TTAGTGGGAGGTTTAAACAA
Downstream 100 bases:
>100_bases TATTCTTTTAAGCATAAGTAATTTTATTCATAATCAAAAAATAAACTCCACACCTAAAAAAGGTGTGGAGTTATTAAACA AGTTAATTTGAAAATTAAGT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; 2-Amino-3-Carboxymuconate-6-Semialdehydedecarboxylase; Hydrolase; TIM-Barrel Fold Metal-Dependent Hydrolase
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSEQVEMPDFPVIDFHIHLPVQRKKPNKSRSSHPAIQNHRKKLQEKFFEKWGFDKPNGEVYSPEKVAELWYKEKEYYGLE KVNAVTAGFDNDTLANIISLYPESFIGFTHHDIQESNSFEELQRGIEELGLSGHKMLAPFMERPFNDPEFEPFWKYLNDN KLPVIIHFGIVGGPGGLATYKYINPFSIFEVARSYPDIPIIIPHFGAGYFQEVLHLAWSLPNIYVDSSGSNQWLDWMVYD MSLKDVFKKSLKTLGPERMIFGTDSSWFPRGFSYKYLKVQWKILEDLGVSKKDQELFFSGNANRLLNNSL
Sequences:
>Translated_310_residues MSEQVEMPDFPVIDFHIHLPVQRKKPNKSRSSHPAIQNHRKKLQEKFFEKWGFDKPNGEVYSPEKVAELWYKEKEYYGLE KVNAVTAGFDNDTLANIISLYPESFIGFTHHDIQESNSFEELQRGIEELGLSGHKMLAPFMERPFNDPEFEPFWKYLNDN KLPVIIHFGIVGGPGGLATYKYINPFSIFEVARSYPDIPIIIPHFGAGYFQEVLHLAWSLPNIYVDSSGSNQWLDWMVYD MSLKDVFKKSLKTLGPERMIFGTDSSWFPRGFSYKYLKVQWKILEDLGVSKKDQELFFSGNANRLLNNSL >Mature_309_residues SEQVEMPDFPVIDFHIHLPVQRKKPNKSRSSHPAIQNHRKKLQEKFFEKWGFDKPNGEVYSPEKVAELWYKEKEYYGLEK VNAVTAGFDNDTLANIISLYPESFIGFTHHDIQESNSFEELQRGIEELGLSGHKMLAPFMERPFNDPEFEPFWKYLNDNK LPVIIHFGIVGGPGGLATYKYINPFSIFEVARSYPDIPIIIPHFGAGYFQEVLHLAWSLPNIYVDSSGSNQWLDWMVYDM SLKDVFKKSLKTLGPERMIFGTDSSWFPRGFSYKYLKVQWKILEDLGVSKKDQELFFSGNANRLLNNSL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36006; Mature: 35875
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQVEMPDFPVIDFHIHLPVQRKKPNKSRSSHPAIQNHRKKLQEKFFEKWGFDKPNGEV CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC YSPEKVAELWYKEKEYYGLEKVNAVTAGFDNDTLANIISLYPESFIGFTHHDIQESNSFE CCHHHHHHHHHHHHHHCCHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHH ELQRGIEELGLSGHKMLAPFMERPFNDPEFEPFWKYLNDNKLPVIIHFGIVGGPGGLATY HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCEEE KYINPFSIFEVARSYPDIPIIIPHFGAGYFQEVLHLAWSLPNIYVDSSGSNQWLDWMVYD EECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEE MSLKDVFKKSLKTLGPERMIFGTDSSWFPRGFSYKYLKVQWKILEDLGVSKKDQELFFSG CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEEHHHCCCCCCCCEEEECC NANRLLNNSL CCCHHHCCCC >Mature Secondary Structure SEQVEMPDFPVIDFHIHLPVQRKKPNKSRSSHPAIQNHRKKLQEKFFEKWGFDKPNGEV CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC YSPEKVAELWYKEKEYYGLEKVNAVTAGFDNDTLANIISLYPESFIGFTHHDIQESNSFE CCHHHHHHHHHHHHHHCCHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHH ELQRGIEELGLSGHKMLAPFMERPFNDPEFEPFWKYLNDNKLPVIIHFGIVGGPGGLATY HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCEEE KYINPFSIFEVARSYPDIPIIIPHFGAGYFQEVLHLAWSLPNIYVDSSGSNQWLDWMVYD EECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEE MSLKDVFKKSLKTLGPERMIFGTDSSWFPRGFSYKYLKVQWKILEDLGVSKKDQELFFSG CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEEHHHCCCCCCCCEEEECC NANRLLNNSL CCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA