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The map label for this gene is ylbJ [H]

Identifier: 188586381

GI number: 188586381

Start: 1832121

End: 1833368

Strand: Direct

Name: ylbJ [H]

Synonym: Nther_1766

Alternate gene names: 188586381

Gene position: 1832121-1833368 (Clockwise)

Preceding gene: 188586379

Following gene: 188586384

Centisome position: 57.88

GC content: 35.42

Gene sequence:

>1248_bases
ATGAAATCAAGAGGAGAAAAAATTAGAACATTAATGTTGACATTGATCATAATATTAATATTTTCGTTATTCAAAGTGCA
ATCCTCTGCCATGATTGCCGGAGCCAAGCATGGTTTGACTACCTGGTGGGAAGTAATTCTCCCCGCACTACTTCCTTTTT
TTATTCTTTCTGAATTTATGGTTCGATTGGGTGTAATACATTTTGGGGGCACCCTTCTAGAACCTTTAATGAGGCCTGTT
TTCAATGTTCCTGGATCTGGCGCCTTTGCCTTGGTTATGGGTATGACCAGCGGCGCCCCAGTAAACGGAACTATAGCAAC
CCGTCTTAGAAATCTAAAAATGTTAACATCAAAAGAAGGCGAAAGATTAATAGCCTTCACATCTAATTCCAGTTTATTGT
TCATGGTGAGTGCAATCCCCGTAGGCATGCTAAATAGGCCTGATCTAGGGATAATTATCGCAGGTATTCACTATACAACT
AATATTATATTAGGAATAATTCTGGGGCAACTTAGCAAATATCTTGATAAGTCGTCCCAGATCAAAAGCCAGAGAAATGA
ATTAGCACAACCCATTGGCCTGATCTGTTTATTTCAAAAAGCCGTGAAGTCAGCAAGTGAGTATTTAGAAACAAACTACA
CCGGTATCCGAGATATGTCCAAAGAAATAGTCTACGATTCTATGATAAAAGTAGTATATATTGGTGGATACATTATGTTA
TTTTCAGTAATAATAAAGTTATTATTTGAACTGGCAATTATCGAACAACTGTATGTTAATCTTAAACATATAATACCAAC
AGCTTTTCGAGATATTAATTTAATTTCTTCTTTTTTTGCGGGGCTGTTTGAAACTACCGTGGGAACAGAAATGGCAGTAG
AATCAAATCAAGAACTAGTCCATATTTTAGCTGTAATATCCTTTATTCTAGGTTGGGGCGGATTTTCGATTCACGCTCAG
GTCATTACTGTGACGGCAGAAGCAGATTTTAGTATGAATACTTTTATAGCTACAAGATTAATTCACGGATTTCTATCAGG
GCTATCTGTTTATGTAGTATTAATCTTTTTGCCTGTAGGTCAAAATTTGATTACTACAACTGCCCTTTTTGAAAGATCTG
ATATCTTTACTTTAATTAAACTGCTAATTTGTTACAAAGTGGCTCTAATTGGTCTATTACTTCTATTATCAATTTTAATT
TTAATCTTTAAACCTGTTATCAATTGGCTGCTATCACTTATCCGGTAA

Upstream 100 bases:

>100_bases
TTTTAGTTCGAGATTTTTATCACTTTACCTGCCATCATTATAATATTTAAAAATTTTATTCATACCATGCTTATAAGAAA
TAGACAATGAGGGGAATATC

Downstream 100 bases:

>100_bases
CAGTTCTTTGGGCAATAATTTTTTTTCATTCATTCTAAATAATACAATTAAACCAACTATTATCCCTCCCACTGCTATAC
TATAAAATGTTAATTGTAAT

Product: nucleoside recognition domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKSRGEKIRTLMLTLIIILIFSLFKVQSSAMIAGAKHGLTTWWEVILPALLPFFILSEFMVRLGVIHFGGTLLEPLMRPV
FNVPGSGAFALVMGMTSGAPVNGTIATRLRNLKMLTSKEGERLIAFTSNSSLLFMVSAIPVGMLNRPDLGIIIAGIHYTT
NIILGIILGQLSKYLDKSSQIKSQRNELAQPIGLICLFQKAVKSASEYLETNYTGIRDMSKEIVYDSMIKVVYIGGYIML
FSVIIKLLFELAIIEQLYVNLKHIIPTAFRDINLISSFFAGLFETTVGTEMAVESNQELVHILAVISFILGWGGFSIHAQ
VITVTAEADFSMNTFIATRLIHGFLSGLSVYVVLIFLPVGQNLITTTALFERSDIFTLIKLLICYKVALIGLLLLLSILI
LIFKPVINWLLSLIR

Sequences:

>Translated_415_residues
MKSRGEKIRTLMLTLIIILIFSLFKVQSSAMIAGAKHGLTTWWEVILPALLPFFILSEFMVRLGVIHFGGTLLEPLMRPV
FNVPGSGAFALVMGMTSGAPVNGTIATRLRNLKMLTSKEGERLIAFTSNSSLLFMVSAIPVGMLNRPDLGIIIAGIHYTT
NIILGIILGQLSKYLDKSSQIKSQRNELAQPIGLICLFQKAVKSASEYLETNYTGIRDMSKEIVYDSMIKVVYIGGYIML
FSVIIKLLFELAIIEQLYVNLKHIIPTAFRDINLISSFFAGLFETTVGTEMAVESNQELVHILAVISFILGWGGFSIHAQ
VITVTAEADFSMNTFIATRLIHGFLSGLSVYVVLIFLPVGQNLITTTALFERSDIFTLIKLLICYKVALIGLLLLLSILI
LIFKPVINWLLSLIR
>Mature_415_residues
MKSRGEKIRTLMLTLIIILIFSLFKVQSSAMIAGAKHGLTTWWEVILPALLPFFILSEFMVRLGVIHFGGTLLEPLMRPV
FNVPGSGAFALVMGMTSGAPVNGTIATRLRNLKMLTSKEGERLIAFTSNSSLLFMVSAIPVGMLNRPDLGIIIAGIHYTT
NIILGIILGQLSKYLDKSSQIKSQRNELAQPIGLICLFQKAVKSASEYLETNYTGIRDMSKEIVYDSMIKVVYIGGYIML
FSVIIKLLFELAIIEQLYVNLKHIIPTAFRDINLISSFFAGLFETTVGTEMAVESNQELVHILAVISFILGWGGFSIHAQ
VITVTAEADFSMNTFIATRLIHGFLSGLSVYVVLIFLPVGQNLITTTALFERSDIFTLIKLLICYKVALIGLLLLLSILI
LIFKPVINWLLSLIR

Specific function: Required for spore cortex formation [H]

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642
- InterPro:   IPR014226 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 45943; Mature: 45943

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRGEKIRTLMLTLIIILIFSLFKVQSSAMIAGAKHGLTTWWEVILPALLPFFILSEFM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VRLGVIHFGGTLLEPLMRPVFNVPGSGAFALVMGMTSGAPVNGTIATRLRNLKMLTSKEG
HHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCC
ERLIAFTSNSSLLFMVSAIPVGMLNRPDLGIIIAGIHYTTNIILGIILGQLSKYLDKSSQ
CEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCHHHH
IKSQRNELAQPIGLICLFQKAVKSASEYLETNYTGIRDMSKEIVYDSMIKVVYIGGYIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FSVIIKLLFELAIIEQLYVNLKHIIPTAFRDINLISSFFAGLFETTVGTEMAVESNQELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH
HILAVISFILGWGGFSIHAQVITVTAEADFSMNTFIATRLIHGFLSGLSVYVVLIFLPVG
HHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QNLITTTALFERSDIFTLIKLLICYKVALIGLLLLLSILILIFKPVINWLLSLIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKSRGEKIRTLMLTLIIILIFSLFKVQSSAMIAGAKHGLTTWWEVILPALLPFFILSEFM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VRLGVIHFGGTLLEPLMRPVFNVPGSGAFALVMGMTSGAPVNGTIATRLRNLKMLTSKEG
HHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCC
ERLIAFTSNSSLLFMVSAIPVGMLNRPDLGIIIAGIHYTTNIILGIILGQLSKYLDKSSQ
CEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCHHHH
IKSQRNELAQPIGLICLFQKAVKSASEYLETNYTGIRDMSKEIVYDSMIKVVYIGGYIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FSVIIKLLFELAIIEQLYVNLKHIIPTAFRDINLISSFFAGLFETTVGTEMAVESNQELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH
HILAVISFILGWGGFSIHAQVITVTAEADFSMNTFIATRLIHGFLSGLSVYVVLIFLPVG
HHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QNLITTTALFERSDIFTLIKLLICYKVALIGLLLLLSILILIFKPVINWLLSLIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12662922 [H]