| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586377
Identifier: 188586377
GI number: 188586377
Start: 1828139
End: 1829110
Strand: Direct
Name: 188586377
Synonym: Nther_1762
Alternate gene names: NA
Gene position: 1828139-1829110 (Clockwise)
Preceding gene: 188586376
Following gene: 188586378
Centisome position: 57.75
GC content: 33.13
Gene sequence:
>972_bases ATGAAACCCGTTATTGGAATTCCAAGATCATTGATGTATCATTTTTATTCAGATAGTTTAGAATTGTTTTTCAAAGAACT GGGTTACAGCATTAAAATCTCCCCTGTTTCAAACAAGGAAATACTAAATCACGGCTCTAAACTAACCATGCTAGATAACT GTTTACCTGTAAAACTTCACTTCGGGCATGTGTTAAGCTTAATTAACAGAGTAGATTACTTATTTATTCCTCGTCTCGTT AGCCTCAAAAAAAGAGAATACATGTGCCCCAAGTTTATCGGAATTCCCGATTTAATTAAACAAACTTTTCCAGAATACTC AGCAAAATTAATTGAACCCACTATTAATTATAATGAAAACAAAACTTTTCTTAAATCTTTAACTGATATTAAAAACTCAT TGGATTTATCTACATGGAAAATTTTGAAGGCTTTTTTTAAAGCAAAAACGGCTTATCATAAAACTATTAAATTCCGAAAA AAACAGTTTACTGAAAGTGTTAATTCATACAAAGCAAATTCTACCGGCCCCCGGATTGGAATAATAGGTCACGATTATGT ACTAGAAGATAAGTTACTTGGAGTGCCTATCAAAAGCAAATTACATGAATTAGGATGTATTATTTACCCTTCGACTGATC TTAAATGGTTACCCCAAAAAGAAAGCGCAAAAGCAATGCCGAAAGACCTATATTGGACTAAAAACAAGGCCTTATTTGAA TCTGCTATATATCTATCGAAAAAAGGTTTGATCGATGGTTTAATTCAAATTAATACTTTTCCATGTGGTCCTGATTCTGT CATCAGTGATTTAATTGATCGAAAAATTAATCACTTAAATCCTTTACCAACCATGACACTAACATTGGATGAACACACTG GGCTTTCTGGTTTACACACCCGTATTGAAGCTTTTATTGATCTTATTAATAGGAGGGGATCACGTGAACCTTACAGTCCC TCACATGGGTAG
Upstream 100 bases:
>100_bases CTTCTATTTTTTTACACTTTTAATTAAGGGCTATGTTATTTAATTCATTTATTATATGAGTCTATTGTGAGCTCCTGATG TTTACTAAGGAGGAATCTAT
Downstream 100 bases:
>100_bases TTACTGGATCGCTAGTAAAACGCTTTTTGAAAATCTAGGTGTCAATGTGATTATCCCACCAAAAACTACTAAACGTACCA TCGAACTCGGAGTCAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: BadF/BadG/BcrA/BcrD ATPase Family Protein; Activator Of-2-Hydroxyglutaryl-CoA Dehydratase; CoA-Substrate-Specific Activase Domain Protein; Activator Of -2-Hydroxyglutaryl-CoA Dehydratase; CoA Activase; CoA-Substrate-Specific Activase Domain-Containing Protein; Activator Of 2-Hydroxyglutaryl-CoA Dehydratase; BadF/BadG/BcrA/BcrD ATPase; CoA- Activase; Chaperone Protein DNAJ
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKPVIGIPRSLMYHFYSDSLELFFKELGYSIKISPVSNKEILNHGSKLTMLDNCLPVKLHFGHVLSLINRVDYLFIPRLV SLKKREYMCPKFIGIPDLIKQTFPEYSAKLIEPTINYNENKTFLKSLTDIKNSLDLSTWKILKAFFKAKTAYHKTIKFRK KQFTESVNSYKANSTGPRIGIIGHDYVLEDKLLGVPIKSKLHELGCIIYPSTDLKWLPQKESAKAMPKDLYWTKNKALFE SAIYLSKKGLIDGLIQINTFPCGPDSVISDLIDRKINHLNPLPTMTLTLDEHTGLSGLHTRIEAFIDLINRRGSREPYSP SHG
Sequences:
>Translated_323_residues MKPVIGIPRSLMYHFYSDSLELFFKELGYSIKISPVSNKEILNHGSKLTMLDNCLPVKLHFGHVLSLINRVDYLFIPRLV SLKKREYMCPKFIGIPDLIKQTFPEYSAKLIEPTINYNENKTFLKSLTDIKNSLDLSTWKILKAFFKAKTAYHKTIKFRK KQFTESVNSYKANSTGPRIGIIGHDYVLEDKLLGVPIKSKLHELGCIIYPSTDLKWLPQKESAKAMPKDLYWTKNKALFE SAIYLSKKGLIDGLIQINTFPCGPDSVISDLIDRKINHLNPLPTMTLTLDEHTGLSGLHTRIEAFIDLINRRGSREPYSP SHG >Mature_323_residues MKPVIGIPRSLMYHFYSDSLELFFKELGYSIKISPVSNKEILNHGSKLTMLDNCLPVKLHFGHVLSLINRVDYLFIPRLV SLKKREYMCPKFIGIPDLIKQTFPEYSAKLIEPTINYNENKTFLKSLTDIKNSLDLSTWKILKAFFKAKTAYHKTIKFRK KQFTESVNSYKANSTGPRIGIIGHDYVLEDKLLGVPIKSKLHELGCIIYPSTDLKWLPQKESAKAMPKDLYWTKNKALFE SAIYLSKKGLIDGLIQINTFPCGPDSVISDLIDRKINHLNPLPTMTLTLDEHTGLSGLHTRIEAFIDLINRRGSREPYSP SHG
Specific function: Unknown
COG id: COG3580
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36917; Mature: 36917
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVIGIPRSLMYHFYSDSLELFFKELGYSIKISPVSNKEILNHGSKLTMLDNCLPVKLH CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEEEEECCCEEEEEH FGHVLSLINRVDYLFIPRLVSLKKREYMCPKFIGIPDLIKQTFPEYSAKLIEPTINYNEN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC KTFLKSLTDIKNSLDLSTWKILKAFFKAKTAYHKTIKFRKKQFTESVNSYKANSTGPRIG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IIGHDYVLEDKLLGVPIKSKLHELGCIIYPSTDLKWLPQKESAKAMPKDLYWTKNKALFE EEECCEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCHHEECCCHHHHH SAIYLSKKGLIDGLIQINTFPCGPDSVISDLIDRKINHLNPLPTMTLTLDEHTGLSGLHT HHHHHHHCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH RIEAFIDLINRRGSREPYSPSHG HHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKPVIGIPRSLMYHFYSDSLELFFKELGYSIKISPVSNKEILNHGSKLTMLDNCLPVKLH CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEEEEECCCEEEEEH FGHVLSLINRVDYLFIPRLVSLKKREYMCPKFIGIPDLIKQTFPEYSAKLIEPTINYNEN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC KTFLKSLTDIKNSLDLSTWKILKAFFKAKTAYHKTIKFRKKQFTESVNSYKANSTGPRIG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IIGHDYVLEDKLLGVPIKSKLHELGCIIYPSTDLKWLPQKESAKAMPKDLYWTKNKALFE EEECCEEECCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCHHHHCCCCHHEECCCHHHHH SAIYLSKKGLIDGLIQINTFPCGPDSVISDLIDRKINHLNPLPTMTLTLDEHTGLSGLHT HHHHHHHCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH RIEAFIDLINRRGSREPYSPSHG HHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA