| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yheD [H]
Identifier: 188586194
GI number: 188586194
Start: 1656718
End: 1657857
Strand: Direct
Name: yheD [H]
Synonym: Nther_1576
Alternate gene names: 188586194
Gene position: 1656718-1657857 (Clockwise)
Preceding gene: 188586193
Following gene: 188586195
Centisome position: 52.34
GC content: 31.75
Gene sequence:
>1140_bases ATGCCTTCCTCCCCAGATTTTTATAACAGCTTCCTTGAAGTTTACAACAGACCAATAGTTGGTTTCTATGTAAGAACTGG TTTAGTGCGAAATTTGCATAGTCAAATCACCTCAAAGCAATTAGATTTTATAATTGAAGCATTAAAAAAAGCTAGGATTA CCTTATACTTCTTTTCTTTAACAGATGTTAATTTAGAAGATAAATCAGTTAATGGGACTTATTATGACGAAAAGACAGAT TATTGGACTTATGGAAAATTTCCTTATCCTGATATTTTATATGTACGAGGTGGACCAGTAAGACCGAAATCCAAATTTTA TCAATTCCAAGAGCAGTTGAGAGAAATGAATGTTAAAAAATTAAATTCCGGGCCAACCTTTAATAAATGGCATGTACTAA AGGTTTTAAAAGAAAATAACAATCTGTTCCACCACTTACCTCCCACTGTAATCTATGAAACAAAAGAAGATTTAAATAAA ATGATAGCCGAATATAAAGACGTCTATGTAAAAGCAGTAATAGGTAGAAAAGGAAAGCAAGTTATGCGCATCAAAGAGAC GTCCGATGGATTATATGAATATAGTTTTTACGTCAACAATCGTTTAAGTAAAGATACAGTGAATTTTAAAGCTCTCTGTA CTGTAATCAGAAAGTTTTTTGGAAAAAAGAAACTCATTATACAAAAAACAATTTCCTTACCTAGAATAGATAATAAGATT TACGATATGAGAGCTGAATTACAGAGAACAGGTACTGGCGAGCTAGAGTTATTAGAAATTTTAGTGCGGGTTAGTCAACC AAATTCACCAATAACGCAACATTCATCAAGTTATCGGTTTAATGATTTCTTTTCTAGTTTTATGAACTACAATCAAGAGA CAATTGGAGAACTTAAAAGTAAAGCTGAGAATGTCCTTACTCAAATATACGAGACCATAGAAGGTGCTTATGGCCCTTAT GGCGAGATAGGCATCGATTTTGCTATTGATAAGAGTGGGAAATTGTGGTTTATCGAGGGTAATTCTAGATCAACTAAAGT ATCATTTTTTAAGGCTGCAGATCAGGAAACTAAATTAAAATCTTACTTAAATATTTTTGAGTATTCAAAATTTCTTTACA AACAACAGATAGATTATTAG
Upstream 100 bases:
>100_bases TGTAGTAGGTGCTGGAGCAGTTGTCACGAAGGATGTGGCACCGGGAACCGTGGTTGCAGGGGTTCCTGCTAAACCAATAA AGAGAAATGGGAGTGATTAA
Downstream 100 bases:
>100_bases TGATTTAAATGTCTATCTACATCTGTTTTTATATTTTGAATTTATACTGATGGAGGGTAAATTAAAATGCAAGTAGATAG TCGGGAAAAGCTTTATCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MPSSPDFYNSFLEVYNRPIVGFYVRTGLVRNLHSQITSKQLDFIIEALKKARITLYFFSLTDVNLEDKSVNGTYYDEKTD YWTYGKFPYPDILYVRGGPVRPKSKFYQFQEQLREMNVKKLNSGPTFNKWHVLKVLKENNNLFHHLPPTVIYETKEDLNK MIAEYKDVYVKAVIGRKGKQVMRIKETSDGLYEYSFYVNNRLSKDTVNFKALCTVIRKFFGKKKLIIQKTISLPRIDNKI YDMRAELQRTGTGELELLEILVRVSQPNSPITQHSSSYRFNDFFSSFMNYNQETIGELKSKAENVLTQIYETIEGAYGPY GEIGIDFAIDKSGKLWFIEGNSRSTKVSFFKAADQETKLKSYLNIFEYSKFLYKQQIDY
Sequences:
>Translated_379_residues MPSSPDFYNSFLEVYNRPIVGFYVRTGLVRNLHSQITSKQLDFIIEALKKARITLYFFSLTDVNLEDKSVNGTYYDEKTD YWTYGKFPYPDILYVRGGPVRPKSKFYQFQEQLREMNVKKLNSGPTFNKWHVLKVLKENNNLFHHLPPTVIYETKEDLNK MIAEYKDVYVKAVIGRKGKQVMRIKETSDGLYEYSFYVNNRLSKDTVNFKALCTVIRKFFGKKKLIIQKTISLPRIDNKI YDMRAELQRTGTGELELLEILVRVSQPNSPITQHSSSYRFNDFFSSFMNYNQETIGELKSKAENVLTQIYETIEGAYGPY GEIGIDFAIDKSGKLWFIEGNSRSTKVSFFKAADQETKLKSYLNIFEYSKFLYKQQIDY >Mature_378_residues PSSPDFYNSFLEVYNRPIVGFYVRTGLVRNLHSQITSKQLDFIIEALKKARITLYFFSLTDVNLEDKSVNGTYYDEKTDY WTYGKFPYPDILYVRGGPVRPKSKFYQFQEQLREMNVKKLNSGPTFNKWHVLKVLKENNNLFHHLPPTVIYETKEDLNKM IAEYKDVYVKAVIGRKGKQVMRIKETSDGLYEYSFYVNNRLSKDTVNFKALCTVIRKFFGKKKLIIQKTISLPRIDNKIY DMRAELQRTGTGELELLEILVRVSQPNSPITQHSSSYRFNDFFSSFMNYNQETIGELKSKAENVLTQIYETIEGAYGPYG EIGIDFAIDKSGKLWFIEGNSRSTKVSFFKAADQETKLKSYLNIFEYSKFLYKQQIDY
Specific function: Involved in sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane; Peripheral membrane protein. Spore wall, spore coat. Note=Forms two rings around the forespore that are offset from its midpoint, before it eventually redistributes to form a shell around the developing spore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yheC/yheD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44424; Mature: 44293
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPDFYNSFLEVYNRPIVGFYVRTGLVRNLHSQITSKQLDFIIEALKKARITLYFFSL CCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEE TDVNLEDKSVNGTYYDEKTDYWTYGKFPYPDILYVRGGPVRPKSKFYQFQEQLREMNVKK EECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHC LNSGPTFNKWHVLKVLKENNNLFHHLPPTVIYETKEDLNKMIAEYKDVYVKAVIGRKGKQ CCCCCCCCHHHEEEEECCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE VMRIKETSDGLYEYSFYVNNRLSKDTVNFKALCTVIRKFFGKKKLIIQKTISLPRIDNKI EEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHH YDMRAELQRTGTGELELLEILVRVSQPNSPITQHSSSYRFNDFFSSFMNYNQETIGELKS HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH KAENVLTQIYETIEGAYGPYGEIGIDFAIDKSGKLWFIEGNSRSTKVSFFKAADQETKLK HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCHHHHHH SYLNIFEYSKFLYKQQIDY HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSSPDFYNSFLEVYNRPIVGFYVRTGLVRNLHSQITSKQLDFIIEALKKARITLYFFSL CCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEE TDVNLEDKSVNGTYYDEKTDYWTYGKFPYPDILYVRGGPVRPKSKFYQFQEQLREMNVKK EECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHC LNSGPTFNKWHVLKVLKENNNLFHHLPPTVIYETKEDLNKMIAEYKDVYVKAVIGRKGKQ CCCCCCCCHHHEEEEECCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCE VMRIKETSDGLYEYSFYVNNRLSKDTVNFKALCTVIRKFFGKKKLIIQKTISLPRIDNKI EEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHH YDMRAELQRTGTGELELLEILVRVSQPNSPITQHSSSYRFNDFFSSFMNYNQETIGELKS HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH KAENVLTQIYETIEGAYGPYGEIGIDFAIDKSGKLWFIEGNSRSTKVSFFKAADQETKLK HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCHHHHHH SYLNIFEYSKFLYKQQIDY HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]